Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp04

Orthogroup ID

N/A

Physical Location & Seq

Genomic Coordinates Forward (+)

14972861 .. 14974731

Gene Structure 1871 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.4G232800.1_v2.0.a1.CDS.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 513 bp

ATGGCAGAGAGATTCCGACTCGGTAACCGGCATACCAGAGAAGCTACGCATCACAGCGATATAGTAAATAAATGTTTTGCTCTCATTTTGATTTATATGCCAGCGCTCAATGCTACATTGCCAAAGGAACAAGTTAATCTTGCAGATTGGGCAATACATTGTCGAAAAAAGGGAATTCTCGACGAAATTATTGATCCACATCTTAAGGCAGGACCCCCTATAAATCCTGAGTGTATGAACAAGTTTTCAGAGACAGCTGAGAAGTGCTTAGCTGATCATCGACTTGAACGTCCTTCAATGGGTGACGTGCTTTGGAACCTCGAGTTCGCACTTCAACTGCATGAAAACCCTGATGGAGAAGCAGTTGTTGCTCAAGATAAAGCAAATGATGCTTATGCAATTCACAATTCCACATTGACCATCGAGGAAGAGAGCACTGCAAGTGAGGCTACTGTAGAAGACTTAAACACAAGTGCAGTTTTTTCACAAATAGTGAATCCAAGAGGAAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0016324 GO:0030427 GO:0035838 GO:0042995 GO:0044425 GO:0044459 GO:0044463 GO:0044464 GO:0045177 GO:0051286 GO:0071944 GO:0090404 GO:0090406 GO:0098590 GO:0120025 GO:0120038

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Malectin_like Pkinase_Tyr

Protein Analysis

171

Amino Acids

19.04

Weight (kDa)

5.32

Isoelectric Point (pI)

49.0

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	288
AclWI	GGATC	1 cut(s)	188
AcsI	RAATTY	1 cut(s)	174
AfeI	AGCGCT	1 cut(s)	105
AfiI	CCNNNNNNNGG	1 cut(s)	299
AflII	CTTAAG	1 cut(s)	203
AgsI	TTSAA	3 cut(s)	287, 297, 335
AjiI	CACGTC	1 cut(s)	307
AluBI	AGCT	3 cut(s)	44, 257, 272
AluI	AGCT	3 cut(s)	44, 257, 272
Alw21I	GWGCWC	1 cut(s)	437
Alw26I	GTCTC	1 cut(s)	245
AlwI	GGATC	1 cut(s)	188
Ama87I	CYCGRG	1 cut(s)	320
Aor51HI	AGCGCT	1 cut(s)	105
ApoI	RAATTY	1 cut(s)	174
AspLEI	GCGC	1 cut(s)	106
AspS9I	GGNCC	1 cut(s)	212
AsuHPI	GGTGA	1 cut(s)	314
AvaI	CYCGRG	1 cut(s)	320
AvaII	GGWCC	1 cut(s)	212
BbsI	GAAGAC	1 cut(s)	465
Bbv12I	GWGCWC	1 cut(s)	437
BccI	CCATC	2 cut(s)	347, 428
BclI	TGATCA	1 cut(s)	274
BcoDI	GTCTC	1 cut(s)	245
BfmI	CTRYAG	1 cut(s)	453
BfoI	RGCGCY	1 cut(s)	107
BfrI	CTTAAG	1 cut(s)	203
BlpI	GCTNAGC	1 cut(s)	268
Bme18I	GGWCC	1 cut(s)	212
BmeT110I	CYCGRG	1 cut(s)	320
BmgBI	CACGTC	1 cut(s)	307
BmgT120I	GGNCC	1 cut(s)	212
BmiI	GGNNCC	2 cut(s)	214, 317
BmsI	GCATC	2 cut(s)	58, 379
BpiI	GAAGAC	1 cut(s)	465
Bpu1102I	GCTNAGC	1 cut(s)	268
BpuEI	CTTGAG	1 cut(s)	357
BsaBI	GATNNNNATC	1 cut(s)	198
BsaXI	ACNNNNNCTCC	2 cut(s)	348, 378
Bsc4I	CCNNNNNNNGG	1 cut(s)	299
Bse118I	RCCGGY	1 cut(s)	27
Bse3DI	GCAATG	1 cut(s)	116
Bse8I	GATNNNNATC	1 cut(s)	198
BseJI	GATNNNNATC	1 cut(s)	198
BseLI	CCNNNNNNNGG	1 cut(s)	299
BseMI	GCAATG	1 cut(s)	116
BseMII	CTCAG	2 cut(s)	219, 249
BsgI	GTGCAG	1 cut(s)	495
BsiHKAI	GWGCWC	1 cut(s)	437
BsiHKCI	CYCGRG	1 cut(s)	320
BsiSI	CCGG	1 cut(s)	28
BslI	CCNNNNNNNGG	1 cut(s)	299
BsmAI	GTCTC	1 cut(s)	245
BsoBI	CYCGRG	1 cut(s)	320
Bsp1286I	GDGCHC	1 cut(s)	437
Bsp143I	GATC	2 cut(s)	193, 274
Bsp1720I	GCTNAGC	1 cut(s)	268
BspCNI	CTCAG	2 cut(s)	220, 250
BspLI	GGNNCC	2 cut(s)	214, 317
BspPI	GGATC	1 cut(s)	188
BspTI	CTTAAG	1 cut(s)	203
BsrDI	GCAATG	1 cut(s)	116
BsrFI	RCCGGY	1 cut(s)	27
BssAI	RCCGGY	1 cut(s)	27
BssMI	GATC	2 cut(s)	193, 274
Bst4CI	ACNGT	1 cut(s)	454
Bst6I	CTCTTC	1 cut(s)	423
BstAFI	CTTAAG	1 cut(s)	203
BstAPI	GCANNNNNTGC	2 cut(s)	368, 389
BstC8I	GCNNGC	1 cut(s)	102
BstDEI	CTNAG	3 cut(s)	228, 258, 268
BstEII	GGTNACC	1 cut(s)	23
BstH2I	RGCGCY	1 cut(s)	107
BstHHI	GCGC	1 cut(s)	106
BstKTI	GATC	2 cut(s)	196, 277
BstMAI	GTCTC	1 cut(s)	245
BstMBI	GATC	2 cut(s)	193, 274
BstMWI	GCNNNNNNNGC	5 cut(s)	110, 149, 368, 389, 446
BstPI	GGTNACC	1 cut(s)	23
BstSFI	CTRYAG	1 cut(s)	453
BstV2I	GAAGAC	1 cut(s)	465
BtrI	CACGTC	1 cut(s)	307
BtsI	GCAGTG	1 cut(s)	435
BtsIMutI	CAGTG	1 cut(s)	435
Cac8I	GCNNGC	1 cut(s)	102
CfoI	GCGC	1 cut(s)	106
Cfr10I	RCCGGY	1 cut(s)	27
Cfr13I	GGNCC	1 cut(s)	212
CviAII	CATG	1 cut(s)	341
CviJI	RGCY	4 cut(s)	44, 257, 272, 449
CviKI_1	RGCY	4 cut(s)	44, 257, 272, 449
DdeI	CTNAG	3 cut(s)	228, 258, 268
DpnI	GATC	2 cut(s)	195, 276
DpnII	GATC	2 cut(s)	193, 274
DrdI	GACNNNNNNGTC	1 cut(s)	288
DseDI	GACNNNNNNGTC	1 cut(s)	288
Eam1104I	CTCTTC	1 cut(s)	423
EarI	CTCTTC	1 cut(s)	423
Eco47I	GGWCC	1 cut(s)	212
Eco47III	AGCGCT	1 cut(s)	105
Eco88I	CYCGRG	1 cut(s)	320
Eco91I	GGTNACC	1 cut(s)	23
EcoO109I	RGGNCCY	1 cut(s)	212
EcoO65I	GGTNACC	1 cut(s)	23
EcoRI	GAATTC	1 cut(s)	174
FaeI	CATG	1 cut(s)	344
FaiI	YATR	8 cut(s)	33, 62, 96, 98, 221, 236, 342, 396
FalI	AAGNNNNNCTT	2 cut(s)	123, 155
FatI	CATG	1 cut(s)	340
FbaI	TGATCA	1 cut(s)	274
GlaI	GCGC	1 cut(s)	105
HaeII	RGCGCY	1 cut(s)	107
HapII	CCGG	1 cut(s)	28
HhaI	GCGC	1 cut(s)	106
Hin1II	CATG	1 cut(s)	344
Hin6I	GCGC	1 cut(s)	104
HinP1I	GCGC	1 cut(s)	104
HinfI	GANTC	3 cut(s)	12, 18, 496
HpaII	CCGG	1 cut(s)	28
HphI	GGTGA	1 cut(s)	314
Hpy188I	TCNGA	2 cut(s)	17, 250
Hpy188III	TCNNGA	3 cut(s)	179, 227, 374
Hpy99I	CGWCG	1 cut(s)	185
HpyAV	CCTTC	1 cut(s)	303
HpyCH4III	ACNGT	1 cut(s)	454
HpyCH4IV	ACGT	2 cut(s)	289, 306
HpyCH4V	TGCA	5 cut(s)	143, 340, 398, 440, 476
HpyF10VI	GCNNNNNNNGC	5 cut(s)	110, 149, 368, 389, 446
HpyF3I	CTNAG	3 cut(s)	228, 258, 268
HpySE526I	ACGT	2 cut(s)	289, 306
Hsp92II	CATG	1 cut(s)	344
HspAI	GCGC	1 cut(s)	104
Ksp22I	TGATCA	1 cut(s)	274
Kzo9I	GATC	2 cut(s)	193, 274
LpnPI	CCDG	6 cut(s)	41, 49, 114, 195, 240, 363
LweI	GCATC	2 cut(s)	58, 379
MaeII	ACGT	2 cut(s)	289, 306
MaeIII	GTNAC	2 cut(s)	23, 302
MalI	GATC	2 cut(s)	195, 276
MboI	GATC	2 cut(s)	193, 274
MboII	GAAGA	2 cut(s)	440, 470
MhlI	GDGCHC	1 cut(s)	437
MluCI	AATT	4 cut(s)	174, 186, 399, 406
MlyI	GAGTC	1 cut(s)	12
MmeI	TCCRAC	1 cut(s)	40
MnlI	CCTC	4 cut(s)	329, 418, 439, 497
MseI	TTAA	3 cut(s)	135, 204, 464
MspA1I	CMGCKG	1 cut(s)	257
MspCI	CTTAAG	1 cut(s)	203
MspI	CCGG	1 cut(s)	28
MwoI	GCNNNNNNNGC	5 cut(s)	110, 149, 368, 389, 446
NdeII	GATC	2 cut(s)	193, 274
NlaIII	CATG	1 cut(s)	344
NlaIV	GGNNCC	2 cut(s)	214, 317
NmuCI	GTSAC	1 cut(s)	302
PaeR7I	CTCGAG	1 cut(s)	320
PcsI	WCGNNNNNNNCGW	1 cut(s)	286
PfeI	GAWTC	2 cut(s)	12, 496
PleI	GAGTC	1 cut(s)	12
PpsI	GAGTC	1 cut(s)	12
PpuMI	RGGWCCY	1 cut(s)	212
Psp5II	RGGWCCY	1 cut(s)	212
PspEI	GGTNACC	1 cut(s)	23
PspN4I	GGNNCC	2 cut(s)	214, 317
PspPI	GGNCC	1 cut(s)	212
PspPPI	RGGWCCY	1 cut(s)	212
PspXI	VCTCGAGB	1 cut(s)	320
PvuII	CAGCTG	1 cut(s)	257
SaqAI	TTAA	3 cut(s)	135, 204, 464
Sau3AI	GATC	2 cut(s)	193, 274
Sau96I	GGNCC	1 cut(s)	212
SchI	GAGTC	1 cut(s)	12
SduI	GDGCHC	1 cut(s)	437
SetI	ASST	6 cut(s)	46, 259, 274, 292, 309, 321
SfaNI	GCATC	2 cut(s)	58, 379
SfcI	CTRYAG	1 cut(s)	453
Sfr274I	CTCGAG	1 cut(s)	320
SinI	GGWCC	1 cut(s)	212
SlaI	CTCGAG	1 cut(s)	320
SmlI	CTYRAG	3 cut(s)	203, 320, 372
SmoI	CTYRAG	3 cut(s)	203, 320, 372
Sse9I	AATT	4 cut(s)	174, 186, 399, 406
TaaI	ACNGT	1 cut(s)	454
TaiI	ACGT	2 cut(s)	292, 309
TaqI	TCGA	5 cut(s)	163, 180, 280, 321, 423
TasI	AATT	4 cut(s)	174, 186, 399, 406
TfiI	GAWTC	2 cut(s)	12, 496
Tru1I	TTAA	3 cut(s)	135, 204, 464
Tru9I	TTAA	3 cut(s)	135, 204, 464
TscAI	CASTG	1 cut(s)	442
TseFI	GTSAC	1 cut(s)	302
Tsp45I	GTSAC	1 cut(s)	302
TspDTI	ATGAA	2 cut(s)	251, 357
TspRI	CASTG	1 cut(s)	442
Vha464I	CTTAAG	1 cut(s)	203
VpaK11BI	GGWCC	1 cut(s)	212
XapI	RAATTY	1 cut(s)	174
XhoI	CTCGAG	1 cut(s)	320

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.