Prupe.4G234500_v2.0.a1

protein heterodimerization activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
N/A
Physical Location & Seq
Reverse (-)
15126209 .. 15127877
1669 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G234500.1_v2.0.a1.CDS.1

Sequence Viewer

Length: 255 bp
ATGTTCCAGAGTCATGCTGTGCTTTCCCTTCAGGAAGCTGTAGAGGCCTATTTGGTGGGTCTGTTCAAGGACACCAACCCGTGCGCCATCTATGCCAAGAGGGTGACAATCATGCCCAAGGACATTCAGCTTGCTAGGCGCATCCTGGAAGCAATTGGAATTCAGGGTTTGGTTGTAGAGGCTATGAAGGAAGAGAGAGAGAGTTATGGGTCTGGGTTTAGAGAGAGAGAGAGAGAGAGAGGTTTTTTAAAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko05034 ko05202 ko05322 map05034 map05202 map05322
Pfam Domains
Protein Families
Histone

Protein Analysis

85

Amino Acids

9.6

Weight (kDa)

7.88

Isoelectric Point (pI)

35.83

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 159
AcuI CTGAAG 1 cut(s) 14
AgsI TTSAA 1 cut(s) 67
AjnI CCWGG 1 cut(s) 144
AluBI AGCT 2 cut(s) 38, 130
AluI AGCT 2 cut(s) 38, 130
AoxI GGCC 1 cut(s) 45
ApoI RAATTY 1 cut(s) 159
AspLEI GCGC 2 cut(s) 86, 141
AsuHPI GGTGA 1 cut(s) 115
BccI CCATC 1 cut(s) 95
BciT130I CCWGG 1 cut(s) 146
BfaI CTAG 1 cut(s) 135
BfmI CTRYAG 1 cut(s) 39
Bme1390I CCNGG 1 cut(s) 146
BmrFI CCNGG 1 cut(s) 146
BmsI GCATC 1 cut(s) 150
BsaJI CCNNGG 1 cut(s) 117
BseBI CCWGG 1 cut(s) 146
BseDI CCNNGG 1 cut(s) 117
BseGI GGATG 1 cut(s) 141
BshFI GGCC 1 cut(s) 47
BsnI GGCC 1 cut(s) 47
BspANI GGCC 1 cut(s) 47
BssECI CCNNGG 1 cut(s) 117
BssT1I CCWWGG 1 cut(s) 117
Bst2UI CCWGG 1 cut(s) 146
Bst6I CTCTTC 1 cut(s) 186
BstC8I GCNNGC 1 cut(s) 132
BstF5I GGATG 1 cut(s) 141
BstHHI GCGC 2 cut(s) 86, 141
BstMWI GCNNNNNNNGC 3 cut(s) 44, 92, 136
BstNI CCWGG 1 cut(s) 146
BstSCI CCNGG 1 cut(s) 144
BstSFI CTRYAG 1 cut(s) 39
BsuRI GGCC 1 cut(s) 47
BtsCI GGATG 1 cut(s) 141
Cac8I GCNNGC 1 cut(s) 132
CfoI GCGC 2 cut(s) 86, 141
CviAII CATG 2 cut(s) 14, 112
CviJI RGCY 4 cut(s) 38, 47, 130, 182
CviKI_1 RGCY 4 cut(s) 38, 47, 130, 182
DraI TTTAAA 1 cut(s) 249
Eam1104I CTCTTC 1 cut(s) 186
EarI CTCTTC 1 cut(s) 186
Eco130I CCWWGG 1 cut(s) 117
Eco147I AGGCCT 1 cut(s) 47
Eco57I CTGAAG 1 cut(s) 14
EcoRI GAATTC 1 cut(s) 159
EcoRII CCWGG 1 cut(s) 144
EcoT14I CCWWGG 1 cut(s) 117
ErhI CCWWGG 1 cut(s) 117
FaeI CATG 2 cut(s) 17, 115
FaiI YATR 5 cut(s) 15, 93, 113, 185, 207
FatI CATG 2 cut(s) 13, 111
FokI GGATG 1 cut(s) 128
FspBI CTAG 1 cut(s) 135
GlaI GCGC 2 cut(s) 85, 140
HaeIII GGCC 1 cut(s) 47
HhaI GCGC 2 cut(s) 86, 141
Hin1II CATG 2 cut(s) 17, 115
Hin6I GCGC 2 cut(s) 84, 139
HinP1I GCGC 2 cut(s) 84, 139
HinfI GANTC 1 cut(s) 10
HphI GGTGA 1 cut(s) 115
Hpy188III TCNNGA 2 cut(s) 7, 32
HpyAV CCTTC 2 cut(s) 38, 181
HpyF10VI GCNNNNNNNGC 3 cut(s) 44, 92, 136
Hsp92II CATG 2 cut(s) 17, 115
HspAI GCGC 2 cut(s) 84, 139
LpnPI CCDG 6 cut(s) 17, 20, 131, 149, 158, 198
LweI GCATC 1 cut(s) 150
MaeI CTAG 1 cut(s) 135
MaeIII GTNAC 1 cut(s) 103
MboII GAAGA 1 cut(s) 203
MfeI CAATTG 1 cut(s) 153
MluCI AATT 2 cut(s) 153, 159
MlyI GAGTC 1 cut(s) 19
MnlI CCTC 4 cut(s) 37, 93, 172, 233
MseI TTAA 1 cut(s) 248
MspR9I CCNGG 1 cut(s) 146
MunI CAATTG 1 cut(s) 153
MvaI CCWGG 1 cut(s) 146
MwoI GCNNNNNNNGC 3 cut(s) 44, 92, 136
NlaIII CATG 2 cut(s) 17, 115
NmuCI GTSAC 1 cut(s) 103
PceI AGGCCT 1 cut(s) 47
PfoI TCCNGGA 1 cut(s) 144
PleI GAGTC 1 cut(s) 18
PpsI GAGTC 1 cut(s) 18
Psp6I CCWGG 1 cut(s) 144
PspGI CCWGG 1 cut(s) 144
SaqAI TTAA 1 cut(s) 248
SchI GAGTC 1 cut(s) 19
ScrFI CCNGG 1 cut(s) 146
SetI ASST 3 cut(s) 40, 132, 244
SfaNI GCATC 1 cut(s) 150
SfcI CTRYAG 1 cut(s) 39
Sse9I AATT 2 cut(s) 153, 159
SseBI AGGCCT 1 cut(s) 47
SspMI CTAG 1 cut(s) 135
StuI AGGCCT 1 cut(s) 47
StyD4I CCNGG 1 cut(s) 144
StyI CCWWGG 1 cut(s) 117
TasI AATT 2 cut(s) 153, 159
Tru1I TTAA 1 cut(s) 248
Tru9I TTAA 1 cut(s) 248
TseFI GTSAC 1 cut(s) 103
Tsp45I GTSAC 1 cut(s) 103
TspDTI ATGAA 1 cut(s) 200
XapI RAATTY 1 cut(s) 159
XspI CTAG 1 cut(s) 135
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.