Prupe.4G237300_v2.0.a1

UDP-Glycosyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
N/A
Physical Location & Seq
Forward (+)
15492550 .. 15495408
2859 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G237300.1_v2.0.a1.CDS.3

Sequence Viewer

Length: 1026 bp
ATGGATTCCACAGAAGTAGCTACTAAGACACATGCTGTTTGCATTCCATTCCCTGCTCAAAGCCATATAAAGGCAATGCTTAAATTTGCAAAGCTCCTCCACCATAGAGGTTTTCATATAACCTTTGTTAACACAGAGTTCAATCACAAGCGCTTTCTTAAAACTCTAGGATCCAATTCCCTAGACGCCATCCCGGATAGCCTTCCAGATTCAAATGAAGACACCACACAAGATGTCACTTTGCTTTGTGAGTCCGTCAGAAAAAATTTATTGGCTCCCTTTCATACCCTCCTTGCAAAACTCAACAATGATGCCATAGAAACATCTACCAATCCTCCAGTGACTTGCATAGTTTCAGATGGTTTCTTGTCCACGTTCACAATCACAGCTGCTGAAGAAATTGGAGCCCCTATAGTGATGTTCTACACTGTAGCTGCCTGCAGCTTCATGGGATGTAAACAATTTTGCGCCGTGGTCGAAAAAGGACTTGCTCCACTCAAAGTTGTCTATGTGAATTTCGGCAGTATAGCAGTCATGAGTCATGACACCAGAACAGCTTGTGGAGTTTGGCTTCCATTCTTTTGGGTAATTAGACCTGATCTTGTTATTGGAGAATCTGCTATTTTGCCGCCTGAGTTTGTGGCTGAAACTAAGGAAAGAAGTCTAATAGCTGGGTGGTGCCCACAAGAGCAAGTCCTTAACCACCCATCAGTCGGAGGATTTTTAACGCACAGCGGTTGGAATTCAGCTGTTGAGAGCCTTACTGCAGGAGTTCCTATGCTCTGTTGGCCATTCTTCGCAGACCAGCAAATGGACTGTCGCTATACTTGCCACGAATGGGGCATTGGCATGGATATAAATTATTTGAGGGACACCCTTGTAGGGTCCACTTCACATTGTATTTCACTAATGAAGAATAAGGCCATGGAGTGGAAAGCATTGGCAGAGCAAGCAACCGGTCCACACGATTCTTCGTCCACAAACTTAGACAATTTAGCTAATCAAATGCAATCAAGAAAACTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

342

Amino Acids

37.59

Weight (kDa)

5.88

Isoelectric Point (pI)

41.35

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 678
AccB7I CCANNNNNTGG 2 cut(s) 811, 930
AciI CCGC 2 cut(s) 629, 735
AclWI GGATC 2 cut(s) 165, 178
AcoI YGGCCR 1 cut(s) 788
AcsI RAATTY 4 cut(s) 83, 265, 514, 742
AcuI CTGAAG 1 cut(s) 414
AcyI GRCGYC 1 cut(s) 186
AfeI AGCGCT 1 cut(s) 152
AfiI CCNNNNNNNGG 6 cut(s) 70, 713, 811, 838, 882, 930
AgeI ACCGGT 1 cut(s) 956
AgsI TTSAA 2 cut(s) 142, 213
AjuI GAANNNNNNNTTGG 2 cut(s) 828, 860
AluBI AGCT 9 cut(s) 20, 94, 389, 434, 444, 557, 671, 749, 998
AluI AGCT 9 cut(s) 20, 94, 389, 434, 444, 557, 671, 749, 998
AlwI GGATC 2 cut(s) 165, 178
AlwNI CAGNNNCTG 1 cut(s) 392
Aor51HI AGCGCT 1 cut(s) 152
AoxI GGCC 2 cut(s) 788, 921
ApeKI GCWGC 3 cut(s) 389, 434, 441
ApoI RAATTY 4 cut(s) 83, 265, 514, 742
ArsI GACNNNNNNTTYG 2 cut(s) 802, 834
AsiGI ACCGGT 1 cut(s) 956
AspLEI GCGC 2 cut(s) 153, 470
AspS9I GGNCC 2 cut(s) 885, 959
AsuC2I CCSGG 1 cut(s) 194
AvaII GGWCC 2 cut(s) 885, 959
BaeGI GKGCMC 1 cut(s) 683
BalI TGGCCA 1 cut(s) 790
BamHI GGATCC 1 cut(s) 170
BanI GGYRCC 1 cut(s) 678
BanII GRGCYC 1 cut(s) 409
BbsI GAAGAC 1 cut(s) 225
BbvI GCAGC 3 cut(s) 376, 421, 453
BccI CCATC 3 cut(s) 197, 353, 715
BceAI ACGGC 1 cut(s) 455
BcnI CCSGG 1 cut(s) 194
BfaI CTAG 3 cut(s) 167, 182, 1024
BfmI CTRYAG 4 cut(s) 411, 429, 439, 765
BfoI RGCGCY 1 cut(s) 154
BisI GCNGC 4 cut(s) 390, 435, 442, 629
BlsI GCNGC 4 cut(s) 391, 436, 443, 630
Bme1390I CCNGG 1 cut(s) 194
Bme18I GGWCC 2 cut(s) 885, 959
BmgT120I GGNCC 2 cut(s) 885, 959
BmiI GGNNCC 5 cut(s) 172, 276, 406, 680, 886
BmrFI CCNGG 1 cut(s) 194
BmsI GCATC 1 cut(s) 301
BpiI GAAGAC 1 cut(s) 225
BpmI CTGGAG 1 cut(s) 321
BpuMI CCSGG 1 cut(s) 194
BsaHI GRCGYC 1 cut(s) 186
BsaJI CCNNGG 2 cut(s) 471, 924
BsaWI WCCGGW 1 cut(s) 956
BsaXI ACNNNNNCTCC 2 cut(s) 319, 349
Bsc4I CCNNNNNNNGG 6 cut(s) 70, 713, 811, 838, 882, 930
Bse118I RCCGGY 1 cut(s) 956
Bse1I ACTGG 1 cut(s) 338
Bse3DI GCAATG 1 cut(s) 81
BseDI CCNNGG 2 cut(s) 471, 924
BseGI GGATG 2 cut(s) 189, 458
BseLI CCNNNNNNNGG 6 cut(s) 70, 713, 811, 838, 882, 930
BseMI GCAATG 1 cut(s) 81
BseMII CTCAG 1 cut(s) 624
BseNI ACTGG 1 cut(s) 338
BseRI GAGGAG 1 cut(s) 86
BseSI GKGCMC 1 cut(s) 683
BseXI GCAGC 3 cut(s) 376, 421, 453
BseYI CCCAGC 1 cut(s) 671
BshFI GGCC 2 cut(s) 790, 923
BshNI GGYRCC 1 cut(s) 678
BshTI ACCGGT 1 cut(s) 956
BsiSI CCGG 2 cut(s) 194, 957
BslFI GGGAC 1 cut(s) 884
BslI CCNNNNNNNGG 6 cut(s) 70, 713, 811, 838, 882, 930
BsmFI GGGAC 1 cut(s) 884
BsmI GAATGC 1 cut(s) 42
BsnI GGCC 2 cut(s) 790, 923
Bsp1286I GDGCHC 2 cut(s) 409, 683
Bsp143I GATC 2 cut(s) 170, 598
Bsp19I CCATGG 1 cut(s) 924
BspACI CCGC 2 cut(s) 629, 735
BspANI GGCC 2 cut(s) 790, 923
BspCNI CTCAG 1 cut(s) 625
BspHI TCATGA 2 cut(s) 534, 541
BspLI GGNNCC 5 cut(s) 172, 276, 406, 680, 886
BspMAI CTGCAG 2 cut(s) 443, 769
BspPI GGATC 2 cut(s) 165, 178
BspT107I GGYRCC 1 cut(s) 678
BsrDI GCAATG 1 cut(s) 81
BsrFI RCCGGY 1 cut(s) 956
BsrI ACTGG 1 cut(s) 338
BssAI RCCGGY 1 cut(s) 956
BssECI CCNNGG 2 cut(s) 471, 924
BssMI GATC 2 cut(s) 170, 598
BssNI GRCGYC 1 cut(s) 186
BssT1I CCWWGG 1 cut(s) 924
Bst4CI ACNGT 2 cut(s) 430, 818
BstACI GRCGYC 1 cut(s) 186
BstC8I GCNNGC 2 cut(s) 439, 951
BstDEI CTNAG 4 cut(s) 24, 633, 651, 985
BstDSI CCRYGG 2 cut(s) 471, 924
BstF5I GGATG 2 cut(s) 189, 458
BstH2I RGCGCY 1 cut(s) 154
BstHHI GCGC 2 cut(s) 153, 470
BstKTI GATC 2 cut(s) 173, 601
BstMBI GATC 2 cut(s) 170, 598
BstMWI GCNNNNNNNGC 3 cut(s) 787, 828, 950
BstNSI RCATGY 1 cut(s) 35
BstSCI CCNGG 1 cut(s) 192
BstSFI CTRYAG 4 cut(s) 411, 429, 439, 765
BstSLI GKGCMC 1 cut(s) 683
BstV1I GCAGC 3 cut(s) 376, 421, 453
BstV2I GAAGAC 1 cut(s) 225
BstX2I RGATCY 1 cut(s) 170
BstXI CCANNNNNNTGG 1 cut(s) 582
BstYI RGATCY 1 cut(s) 170
BsuRI GGCC 2 cut(s) 790, 923
BtgI CCRYGG 2 cut(s) 471, 924
BtsCI GGATG 2 cut(s) 189, 458
BtsIMutI CAGTG 2 cut(s) 345, 426
Cac8I GCNNGC 2 cut(s) 439, 951
CaiI CAGNNNCTG 1 cut(s) 392
CciI TCATGA 2 cut(s) 534, 541
CfoI GCGC 2 cut(s) 153, 470
Cfr10I RCCGGY 1 cut(s) 956
Cfr13I GGNCC 2 cut(s) 885, 959
CseI GACGC 1 cut(s) 194
CspAI ACCGGT 1 cut(s) 956
CviAII CATG 6 cut(s) 32, 448, 535, 542, 850, 925
DdeI CTNAG 4 cut(s) 24, 633, 651, 985
DpnI GATC 2 cut(s) 172, 600
DpnII GATC 2 cut(s) 170, 598
EaeI YGGCCR 1 cut(s) 788
Eco130I CCWWGG 1 cut(s) 924
Eco24I GRGCYC 1 cut(s) 409
Eco47I GGWCC 2 cut(s) 885, 959
Eco47III AGCGCT 1 cut(s) 152
Eco57I CTGAAG 1 cut(s) 414
EcoRI GAATTC 1 cut(s) 742
EcoT14I CCWWGG 1 cut(s) 924
EcoT38I GRGCYC 1 cut(s) 409
ErhI CCWWGG 1 cut(s) 924
FaeI CATG 6 cut(s) 35, 451, 538, 545, 853, 928
FaqI GGGAC 1 cut(s) 884
FatI CATG 6 cut(s) 31, 447, 534, 541, 849, 924
Fnu4HI GCNGC 4 cut(s) 390, 435, 442, 629
FokI GGATG 2 cut(s) 176, 465
FriOI GRGCYC 1 cut(s) 409
Fsp4HI GCNGC 4 cut(s) 390, 435, 442, 629
FspBI CTAG 3 cut(s) 167, 182, 1024
GlaI GCGC 2 cut(s) 152, 469
GluI GCNGC 4 cut(s) 390, 435, 442, 629
GsaI CCCAGC 1 cut(s) 675
GsuI CTGGAG 1 cut(s) 321
HaeII RGCGCY 1 cut(s) 154
HaeIII GGCC 2 cut(s) 790, 923
HapII CCGG 2 cut(s) 194, 957
HgaI GACGC 1 cut(s) 194
HhaI GCGC 2 cut(s) 153, 470
Hin1I GRCGYC 1 cut(s) 186
Hin1II CATG 6 cut(s) 35, 451, 538, 545, 853, 928
Hin6I GCGC 2 cut(s) 151, 468
HinP1I GCGC 2 cut(s) 151, 468
HincII GTYRAC 1 cut(s) 130
HindII GTYRAC 1 cut(s) 130
HinfI GANTC 6 cut(s) 5, 209, 251, 538, 614, 968
HpaI GTTAAC 1 cut(s) 130
HpaII CCGG 2 cut(s) 194, 957
Hpy166II GTNNAC 7 cut(s) 130, 372, 378, 458, 888, 962, 978
Hpy188I TCNGA 3 cut(s) 260, 358, 716
Hpy188III TCNNGA 4 cut(s) 206, 535, 542, 1014
Hpy8I GTNNAC 7 cut(s) 130, 372, 378, 458, 888, 962, 978
HpyAV CCTTC 1 cut(s) 212
HpyCH4III ACNGT 2 cut(s) 430, 818
HpyCH4IV ACGT 1 cut(s) 374
HpyCH4V TGCA 7 cut(s) 42, 89, 296, 348, 441, 767, 1009
HpyF10VI GCNNNNNNNGC 3 cut(s) 787, 828, 950
HpyF3I CTNAG 4 cut(s) 24, 633, 651, 985
HpySE526I ACGT 1 cut(s) 374
Hsp92I GRCGYC 1 cut(s) 186
Hsp92II CATG 6 cut(s) 35, 451, 538, 545, 853, 928
HspAI GCGC 2 cut(s) 151, 468
KspAI GTTAAC 1 cut(s) 130
Kzo9I GATC 2 cut(s) 170, 598
LmnI GCTCC 4 cut(s) 99, 280, 404, 496
Lsp1109I GCAGC 3 cut(s) 376, 421, 453
LweI GCATC 1 cut(s) 301
MaeI CTAG 3 cut(s) 167, 182, 1024
MaeII ACGT 1 cut(s) 374
MaeIII GTNAC 2 cut(s) 235, 340
MalI GATC 2 cut(s) 172, 600
MboI GATC 2 cut(s) 170, 598
MboII GAAGA 5 cut(s) 230, 407, 787, 925, 963
MflI RGATCY 1 cut(s) 170
MhlI GDGCHC 2 cut(s) 409, 683
MlsI TGGCCA 1 cut(s) 790
MluNI TGGCCA 1 cut(s) 790
MlyI GAGTC 2 cut(s) 260, 547
MmeI TCCRAC 2 cut(s) 694, 719
MnlI CCTC 6 cut(s) 101, 107, 299, 345, 710, 861
Mox20I TGGCCA 1 cut(s) 790
MscI TGGCCA 1 cut(s) 790
MseI TTAA 5 cut(s) 81, 129, 159, 699, 725
MslI CAYNNNNRTG 1 cut(s) 848
Msp20I TGGCCA 1 cut(s) 790
MspA1I CMGCKG 3 cut(s) 389, 735, 749
MspI CCGG 2 cut(s) 194, 957
MspR9I CCNGG 1 cut(s) 194
Mva1269I GAATGC 1 cut(s) 42
MwoI GCNNNNNNNGC 3 cut(s) 787, 828, 950
NciI CCSGG 1 cut(s) 194
NcoI CCATGG 1 cut(s) 924
NdeII GATC 2 cut(s) 170, 598
NlaIII CATG 6 cut(s) 35, 451, 538, 545, 853, 928
NlaIV GGNNCC 5 cut(s) 172, 276, 406, 680, 886
NmuCI GTSAC 2 cut(s) 235, 340
NspI RCATGY 1 cut(s) 35
PagI TCATGA 2 cut(s) 534, 541
PctI GAATGC 1 cut(s) 42
PfeI GAWTC 4 cut(s) 5, 209, 614, 968
PflMI CCANNNNNTGG 2 cut(s) 811, 930
PfoI TCCNGGA 1 cut(s) 192
PinAI ACCGGT 1 cut(s) 956
PkrI GCNGC 4 cut(s) 391, 436, 443, 630
PleI GAGTC 2 cut(s) 259, 546
PpsI GAGTC 2 cut(s) 259, 546
PspFI CCCAGC 1 cut(s) 671
PspN4I GGNNCC 5 cut(s) 172, 276, 406, 680, 886
PspPI GGNCC 2 cut(s) 885, 959
PstI CTGCAG 2 cut(s) 443, 769
PstNI CAGNNNCTG 1 cut(s) 392
PsuI RGATCY 1 cut(s) 170
PvuII CAGCTG 2 cut(s) 389, 749
RseI CAYNNNNRTG 1 cut(s) 848
SaqAI TTAA 5 cut(s) 81, 129, 159, 699, 725
SatI GCNGC 4 cut(s) 390, 435, 442, 629
Sau3AI GATC 2 cut(s) 170, 598
Sau96I GGNCC 2 cut(s) 885, 959
SchI GAGTC 2 cut(s) 260, 547
ScrFI CCNGG 1 cut(s) 194
SduI GDGCHC 2 cut(s) 409, 683
SfaNI GCATC 1 cut(s) 301
SfcI CTRYAG 4 cut(s) 411, 429, 439, 765
SinI GGWCC 2 cut(s) 885, 959
SmiMI CAYNNNNRTG 1 cut(s) 848
SsiI CCGC 2 cut(s) 629, 735
SspMI CTAG 3 cut(s) 167, 182, 1024
StyD4I CCNGG 1 cut(s) 192
StyI CCWWGG 1 cut(s) 924
TaaI ACNGT 2 cut(s) 430, 818
TaiI ACGT 1 cut(s) 377
TaqI TCGA 1 cut(s) 477
TauI GCSGC 1 cut(s) 631
TfiI GAWTC 4 cut(s) 5, 209, 614, 968
Tru1I TTAA 5 cut(s) 81, 129, 159, 699, 725
Tru9I TTAA 5 cut(s) 81, 129, 159, 699, 725
TscAI CASTG 2 cut(s) 345, 433
TseFI GTSAC 2 cut(s) 235, 340
TseI GCWGC 3 cut(s) 389, 434, 441
Tsp45I GTSAC 2 cut(s) 235, 340
TspDTI ATGAA 5 cut(s) 104, 231, 272, 436, 926
TspGWI ACGGA 1 cut(s) 244
TspRI CASTG 2 cut(s) 345, 433
Van91I CCANNNNNTGG 2 cut(s) 811, 930
VpaK11BI GGWCC 2 cut(s) 885, 959
XapI RAATTY 4 cut(s) 83, 265, 514, 742
XceI RCATGY 1 cut(s) 35
XspI CTAG 3 cut(s) 167, 182, 1024
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.