Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp04

Orthogroup ID

N/A

Physical Location & Seq

Genomic Coordinates Reverse (-)

15742263 .. 15743333

Gene Structure 1071 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.4G239500.1_v2.0.a1.CDS.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1071 bp

ATGTCTACTTTGGTTGGTTCATCTTCATTTGCAACTGTCAACACAAAGTATCCCAACAAAACATACAAAACATTGGCCACCTGTGTGGACAACTCGAGAACATCCCAACCCACTCCAAGCCATCATCTCTCAGTCTCAGATCAACCCCGATTCGACAATCCCGTTTCCAAGTTATTGAAGTTTTACAGACCATGTTTGACAGATTTTGTTTCACAAACAGCTACTAACCCGAACCCCGAACAACTCCCTCAGCCTCGGAGAACTTTCATTGAAGATACCAAAGGAGAAGAAGCGAAGAAAGATTACATATGGATGAAAATGAGAGAGGAGTCTTATATGGATGTTGAACGGGAGCCTATCTTGTCTAGCTATTATTTTGCTTCAATTTTGGCTCATAATTCTTTAGAAAGCGCTCTGGCGAATCATCTTGCAAATAAACTGAGCAACTCTACCCTGCCTGTGCATACCCTTTACGATATATTTTCTGGTGTTCTTTATGAAGATCAGGAAATTTTGGAAGCCATAAAAGAAGATTTGAAGGGAGTGAAAGAGAGAGACCCAGCATGCACAAGTTATGTGCACTGTTTCTTGAACTACAAAGGTTTCCTTGCATGTGAAGCTCATAGGGTGGCACATAATCTATGGTTGCGAGGCAGAGAGGCCTTGGCACTATTGATTCAGAATAGGGTGTCTGAGGTGCTTGCAGTGGATATCCATCCCGGGGCCAAGATCGGATGTGGCATATTGCTCGATCATGGCACCGGGGTAGTGATAGGAGAGACGGTGGTGATGGGAAACAATGTGTCAATTCTGCATAATGTGACTTTGGGAGGAACAGGCAAGGAGTGTGGGGATAGGCACCCAAAGATTGGAGATGGGGTACTAATAGGGGCAGGGACCAATGTGTTAGGGAATGTAAGGATTGGTGAAGGTGCTAAGATTGGGGCTGGTGCTGTTGTGTTAAAAGATGTACTTCCAAGAACTACTGCAGTTGGGAACCCAGCAAGATTGGTTGGGAGGAATGACCTGTTTAGGCTTGACACAGTCCAAGCACTTAACCATGTTATTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000096 GO:0000097 GO:0003674 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005829 GO:0006082 GO:0006520 GO:0006534 GO:0006790 GO:0006807 GO:0008150 GO:0008152 GO:0008270 GO:0008374 GO:0008652 GO:0009001 GO:0009058 GO:0009069 GO:0009070 GO:0009987 GO:0010035 GO:0010038 GO:0016053 GO:0016407 GO:0016412 GO:0016413 GO:0016740 GO:0016746 GO:0016747 GO:0019344 GO:0019752 GO:0042221 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044272 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046394 GO:0046686 GO:0046872 GO:0046914 GO:0050896 GO:0071704 GO:1901564 GO:1901566 GO:1901576 GO:1901605 GO:1901607

KEGG Pathways

Metabolic & Signaling

ko00270 ko00920 ko01100 ko01110 ko01120 ko01200 ko01230 ko05111 map00270 map00920 map01100 map01110 map01120 map01200 map01230 map05111

Pfam Domains

Protein Families

Hexapep SATase_N

Protein Analysis

357

Amino Acids

39.0

Weight (kDa)

6.89

Isoelectric Point (pI)

36.96

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	758, 858
AccB7I	CCANNNNNTGG	1 cut(s)	869
AccI	GTMKAC	1 cut(s)	5
AcoI	YGGCCR	1 cut(s)	75
AcsI	RAATTY	1 cut(s)	510
AfaI	GTAC	2 cut(s)	882, 972
AfeI	AGCGCT	1 cut(s)	412
AfiI	CCNNNNNNNGG	2 cut(s)	721, 869
AgsI	TTSAA	6 cut(s)	178, 272, 347, 384, 538, 592
AleI	CACNNNNGTG	1 cut(s)	83
AluBI	AGCT	3 cut(s)	221, 369, 620
AluI	AGCT	3 cut(s)	221, 369, 620
Alw21I	GWGCWC	1 cut(s)	582
Alw26I	GTCTC	3 cut(s)	139, 549, 773
Alw44I	GTGCAC	1 cut(s)	578
Ama87I	CYCGRG	2 cut(s)	94, 719
Aor51HI	AGCGCT	1 cut(s)	412
AoxI	GGCC	3 cut(s)	75, 660, 723
ApaLI	GTGCAC	1 cut(s)	578
ApoI	RAATTY	1 cut(s)	510
AspLEI	GCGC	1 cut(s)	413
AspS9I	GGNCC	2 cut(s)	723, 897
AsuC2I	CCSGG	3 cut(s)	720, 721, 763
AsuHPI	GGTGA	2 cut(s)	799, 938
AvaI	CYCGRG	2 cut(s)	94, 719
AvaII	GGWCC	1 cut(s)	897
BaeGI	GKGCMC	1 cut(s)	582
BalI	TGGCCA	1 cut(s)	77
BanI	GGYRCC	2 cut(s)	758, 858
BarI	GAAGNNNNNNTAC	2 cut(s)	287, 319
Bbv12I	GWGCWC	1 cut(s)	582
BbvCI	CCTCAGC	1 cut(s)	249
BccI	CCATC	4 cut(s)	129, 723, 784, 869
BcgI	CGANNNNNNTGC	2 cut(s)	730, 764
BciVI	GTATCC	1 cut(s)	60
BcnI	CCSGG	3 cut(s)	720, 721, 763
BcoDI	GTCTC	3 cut(s)	139, 549, 773
BfaI	CTAG	1 cut(s)	366
BfmI	CTRYAG	1 cut(s)	987
BfoI	RGCGCY	1 cut(s)	414
BfuI	GTATCC	1 cut(s)	60
Bme1390I	CCNGG	3 cut(s)	720, 721, 763
Bme18I	GGWCC	1 cut(s)	897
BmeT110I	CYCGRG	2 cut(s)	94, 719
BmgT120I	GGNCC	2 cut(s)	723, 897
BmiI	GGNNCC	6 cut(s)	354, 724, 760, 860, 898, 998
BmrFI	CCNGG	3 cut(s)	720, 721, 763
Bpu10I	CCTNAGC	1 cut(s)	249
BpuMI	CCSGG	3 cut(s)	720, 721, 763
BsaBI	GATNNNNATC	1 cut(s)	714
BsaI	GGTCTC	1 cut(s)	549
BsaJI	CCNNGG	5 cut(s)	254, 663, 719, 720, 762
BsaXI	ACNNNNNCTCC	4 cut(s)	768, 798, 864, 894
Bsc4I	CCNNNNNNNGG	2 cut(s)	721, 869
Bse8I	GATNNNNATC	1 cut(s)	714
BseDI	CCNNGG	5 cut(s)	254, 663, 719, 720, 762
BseGI	GGATG	5 cut(s)	101, 318, 346, 715, 740
BseJI	GATNNNNATC	1 cut(s)	714
BseLI	CCNNNNNNNGG	2 cut(s)	721, 869
BseMII	CTCAG	5 cut(s)	144, 150, 263, 431, 684
BseRI	GAGGAG	1 cut(s)	341
BseSI	GKGCMC	1 cut(s)	582
BseYI	CCCAGC	2 cut(s)	559, 1000
BshFI	GGCC	3 cut(s)	77, 662, 725
BshNI	GGYRCC	2 cut(s)	758, 858
BsiHKAI	GWGCWC	1 cut(s)	582
BsiHKCI	CYCGRG	2 cut(s)	94, 719
BsiSI	CCGG	2 cut(s)	720, 762
BslFI	GGGAC	1 cut(s)	910
BslI	CCNNNNNNNGG	2 cut(s)	721, 869
BsmAI	GTCTC	3 cut(s)	139, 549, 773
BsmBI	CGTCTC	1 cut(s)	773
BsmFI	GGGAC	1 cut(s)	910
BsnI	GGCC	3 cut(s)	77, 662, 725
Bso31I	GGTCTC	1 cut(s)	549
BsoBI	CYCGRG	2 cut(s)	94, 719
Bsp1286I	GDGCHC	1 cut(s)	582
Bsp143I	GATC	4 cut(s)	139, 502, 729, 751
BspANI	GGCC	3 cut(s)	77, 662, 725
BspCNI	CTCAG	5 cut(s)	143, 149, 262, 432, 685
BspLI	GGNNCC	6 cut(s)	354, 724, 760, 860, 898, 998
BspMAI	CTGCAG	1 cut(s)	991
BspT107I	GGYRCC	2 cut(s)	758, 858
BspTNI	GGTCTC	1 cut(s)	549
BssECI	CCNNGG	5 cut(s)	254, 663, 719, 720, 762
BssMI	GATC	4 cut(s)	139, 502, 729, 751
BssT1I	CCWWGG	1 cut(s)	663
Bst4CI	ACNGT	4 cut(s)	37, 584, 784, 1045
BstC8I	GCNNGC	2 cut(s)	565, 702
BstDEI	CTNAG	6 cut(s)	130, 136, 249, 440, 693, 936
BstF5I	GGATG	5 cut(s)	101, 318, 346, 715, 740
BstH2I	RGCGCY	1 cut(s)	414
BstHHI	GCGC	1 cut(s)	413
BstKTI	GATC	4 cut(s)	142, 505, 732, 754
BstMAI	GTCTC	3 cut(s)	139, 549, 773
BstMBI	GATC	4 cut(s)	139, 502, 729, 751
BstMWI	GCNNNNNNNGC	1 cut(s)	617
BstNSI	RCATGY	2 cut(s)	567, 615
BstSCI	CCNGG	3 cut(s)	718, 719, 761
BstSFI	CTRYAG	1 cut(s)	987
BstSLI	GKGCMC	1 cut(s)	582
BstXI	CCANNNNNNTGG	1 cut(s)	85
BsuI	GTATCC	1 cut(s)	60
BsuRI	GGCC	3 cut(s)	77, 662, 725
BtsCI	GGATG	5 cut(s)	101, 318, 346, 715, 740
BtsI	GCAGTG	1 cut(s)	711
BtsIMutI	CAGTG	2 cut(s)	580, 711
Cac8I	GCNNGC	2 cut(s)	565, 702
CfoI	GCGC	1 cut(s)	413
Cfr13I	GGNCC	2 cut(s)	723, 897
Cfr9I	CCCGGG	1 cut(s)	719
Csp6I	GTAC	2 cut(s)	881, 971
CspCI	CAANNNNNGTGG	2 cut(s)	829, 864
CviAII	CATG	5 cut(s)	192, 564, 612, 755, 1061
CviQI	GTAC	2 cut(s)	881, 971
DdeI	CTNAG	6 cut(s)	130, 136, 249, 440, 693, 936
DpnI	GATC	4 cut(s)	141, 504, 731, 753
DpnII	GATC	4 cut(s)	139, 502, 729, 751
EaeI	YGGCCR	1 cut(s)	75
Eco130I	CCWWGG	1 cut(s)	663
Eco147I	AGGCCT	1 cut(s)	662
Eco31I	GGTCTC	1 cut(s)	549
Eco32I	GATATC	1 cut(s)	712
Eco47I	GGWCC	1 cut(s)	897
Eco47III	AGCGCT	1 cut(s)	412
Eco88I	CYCGRG	2 cut(s)	94, 719
EcoRV	GATATC	1 cut(s)	712
EcoT14I	CCWWGG	1 cut(s)	663
ErhI	CCWWGG	1 cut(s)	663
Esp3I	CGTCTC	1 cut(s)	773
FaeI	CATG	5 cut(s)	195, 567, 615, 758, 1064
FalI	AAGNNNNNCTT	4 cut(s)	591, 623, 957, 989
FaqI	GGGAC	1 cut(s)	910
FatI	CATG	5 cut(s)	191, 563, 611, 754, 1060
FauNDI	CATATG	1 cut(s)	308
FblI	GTMKAC	1 cut(s)	5
FokI	GGATG	5 cut(s)	88, 325, 353, 702, 747
FspBI	CTAG	1 cut(s)	366
GlaI	GCGC	1 cut(s)	412
GsaI	CCCAGC	2 cut(s)	563, 1004
HaeII	RGCGCY	1 cut(s)	414
HaeIII	GGCC	3 cut(s)	77, 662, 725
HapII	CCGG	2 cut(s)	720, 762
HhaI	GCGC	1 cut(s)	413
Hin1II	CATG	5 cut(s)	195, 567, 615, 758, 1064
Hin6I	GCGC	1 cut(s)	411
HinP1I	GCGC	1 cut(s)	411
HincII	GTYRAC	1 cut(s)	40
HindII	GTYRAC	1 cut(s)	40
HinfI	GANTC	4 cut(s)	150, 329, 421, 676
HpaII	CCGG	2 cut(s)	720, 762
HphI	GGTGA	2 cut(s)	799, 938
Hpy166II	GTNNAC	4 cut(s)	6, 40, 88, 580
Hpy188I	TCNGA	5 cut(s)	139, 258, 681, 694, 734
Hpy188III	TCNNGA	3 cut(s)	96, 506, 589
Hpy8I	GTNNAC	4 cut(s)	6, 40, 88, 580
HpyAV	CCTTC	2 cut(s)	532, 923
HpyCH4III	ACNGT	4 cut(s)	37, 584, 784, 1045
HpyCH4V	TGCA	9 cut(s)	32, 431, 463, 567, 580, 611, 704, 814, 989
HpyF10VI	GCNNNNNNNGC	1 cut(s)	617
HpyF3I	CTNAG	6 cut(s)	130, 136, 249, 440, 693, 936
Hsp92II	CATG	5 cut(s)	195, 567, 615, 758, 1064
HspAI	GCGC	1 cut(s)	411
Kzo9I	GATC	4 cut(s)	139, 502, 729, 751
LmnI	GCTCC	1 cut(s)	352
MaeI	CTAG	1 cut(s)	366
MaeIII	GTNAC	1 cut(s)	820
MalI	GATC	4 cut(s)	141, 504, 731, 753
MboI	GATC	4 cut(s)	139, 502, 729, 751
MboII	GAAGA	6 cut(s)	15, 284, 299, 307, 512, 542
MhlI	GDGCHC	1 cut(s)	582
MlsI	TGGCCA	1 cut(s)	77
MluCI	AATT	4 cut(s)	384, 397, 510, 807
MluNI	TGGCCA	1 cut(s)	77
MlyI	GAGTC	1 cut(s)	338
MnlI	CCTC	8 cut(s)	258, 264, 319, 644, 652, 688, 824, 1011
Mox20I	TGGCCA	1 cut(s)	77
MscI	TGGCCA	1 cut(s)	77
MseI	TTAA	2 cut(s)	962, 1056
MslI	CAYNNNNRTG	2 cut(s)	83, 311
Msp20I	TGGCCA	1 cut(s)	77
MspI	CCGG	2 cut(s)	720, 762
MspR9I	CCNGG	3 cut(s)	720, 721, 763
MwoI	GCNNNNNNNGC	1 cut(s)	617
NciI	CCSGG	3 cut(s)	720, 721, 763
NdeI	CATATG	1 cut(s)	308
NdeII	GATC	4 cut(s)	139, 502, 729, 751
NlaIII	CATG	5 cut(s)	195, 567, 615, 758, 1064
NlaIV	GGNNCC	6 cut(s)	354, 724, 760, 860, 898, 998
NmuCI	GTSAC	1 cut(s)	820
NspI	RCATGY	2 cut(s)	567, 615
OliI	CACNNNNGTG	1 cut(s)	83
PaeI	GCATGC	1 cut(s)	567
PaeR7I	CTCGAG	1 cut(s)	94
PceI	AGGCCT	1 cut(s)	662
PcsI	WCGNNNNNNNCGW	1 cut(s)	159
PfeI	GAWTC	3 cut(s)	150, 421, 676
PflFI	GACNNNGTC	1 cut(s)	1043
PflMI	CCANNNNNTGG	1 cut(s)	869
PleI	GAGTC	1 cut(s)	337
PpsI	GAGTC	1 cut(s)	337
PspFI	CCCAGC	2 cut(s)	559, 1000
PspN4I	GGNNCC	6 cut(s)	354, 724, 760, 860, 898, 998
PspPI	GGNCC	2 cut(s)	723, 897
PstI	CTGCAG	1 cut(s)	991
PsyI	GACNNNGTC	1 cut(s)	1043
RsaI	GTAC	2 cut(s)	882, 972
RsaNI	GTAC	2 cut(s)	881, 971
RseI	CAYNNNNRTG	2 cut(s)	83, 311
SaqAI	TTAA	2 cut(s)	962, 1056
Sau3AI	GATC	4 cut(s)	139, 502, 729, 751
Sau96I	GGNCC	2 cut(s)	723, 897
SchI	GAGTC	1 cut(s)	338
ScrFI	CCNGG	3 cut(s)	720, 721, 763
SduI	GDGCHC	1 cut(s)	582
SetI	ASST	8 cut(s)	83, 223, 371, 604, 622, 699, 934, 1029
SfcI	CTRYAG	1 cut(s)	987
Sfr274I	CTCGAG	1 cut(s)	94
SinI	GGWCC	1 cut(s)	897
SlaI	CTCGAG	1 cut(s)	94
SmaI	CCCGGG	1 cut(s)	721
SmiMI	CAYNNNNRTG	2 cut(s)	83, 311
SmlI	CTYRAG	1 cut(s)	94
SmoI	CTYRAG	1 cut(s)	94
SphI	GCATGC	1 cut(s)	567
Sse9I	AATT	4 cut(s)	384, 397, 510, 807
SseBI	AGGCCT	1 cut(s)	662
SspMI	CTAG	1 cut(s)	366
StuI	AGGCCT	1 cut(s)	662
StyD4I	CCNGG	3 cut(s)	718, 719, 761
StyI	CCWWGG	1 cut(s)	663
TaaI	ACNGT	4 cut(s)	37, 584, 784, 1045
TaqI	TCGA	3 cut(s)	95, 153, 750
TasI	AATT	4 cut(s)	384, 397, 510, 807
TatI	WGTACW	1 cut(s)	970
TfiI	GAWTC	3 cut(s)	150, 421, 676
Tru1I	TTAA	2 cut(s)	962, 1056
Tru9I	TTAA	2 cut(s)	962, 1056
TscAI	CASTG	2 cut(s)	587, 711
TseFI	GTSAC	1 cut(s)	820
Tsp45I	GTSAC	1 cut(s)	820
TspDTI	ATGAA	5 cut(s)	9, 15, 256, 329, 513
TspMI	CCCGGG	1 cut(s)	719
TspRI	CASTG	2 cut(s)	587, 711
Tth111I	GACNNNGTC	1 cut(s)	1043
Van91I	CCANNNNNTGG	1 cut(s)	869
VneI	GTGCAC	1 cut(s)	578
VpaK11BI	GGWCC	1 cut(s)	897
XapI	RAATTY	1 cut(s)	510
XceI	RCATGY	2 cut(s)	567, 615
XhoI	CTCGAG	1 cut(s)	94
XmaI	CCCGGG	1 cut(s)	719
XmiI	GTMKAC	1 cut(s)	5
XspI	CTAG	1 cut(s)	366

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.