Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp04

Orthogroup ID

N/A

Physical Location & Seq

Genomic Coordinates Reverse (-)

16041401 .. 16042777

Gene Structure 1377 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.4G242900.1_v2.0.a1.CDS.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 951 bp

ATGGAGCTCAATGAAGTTGAGAGCTCAAATAATTTTCACATAGCCATGTTCCCATTCTTTTTAATGGGACACGTACCAGAATTCACAAGGAAACTTGGGGTTGGGATCAAATCTATTTACTACATCACTACAGCTGCAGTTGTGCATGCGTTCTCTATTGTGCTGGGGAAAATTACAGCCCCAGCCTTACTGAAACAACTACGTGACCTGCATCCTGGATACCAATCACAAAATGTGGTACTGCTTCCTGGTCGTGAAATTCGCTCCATGTTAGTGTTATGGAAGCCGTTTGGATTAGGTGGGCTTACATTTTACCAAAGGTTCGCAAACGCATCACAAAAAGTGACAACATGTAGAGAAATCGAAGGTCATTTCTACGATTACCTGAGCGCACATCACAAAAGGCCTATGCTTTTAACTGGACCAGTTTATGGGTTGGACGACTCGAACAAGAATAGCCCACCTTTAGAAGACATGTGGGCTAAGTGGCTTGGTGGGTTTGAGGAAGCAGGGACGGTGGTGTTTTGTGCATTTAGGAATCAATTGATCCTTGAGAAGGACCAATTCCAAGAGCTTGTGCTGGGGTTTGAGCTAACTGGGTTAACCTTTTTTTATATTTTCAAACCACCTGCAGCTTGTGCTACAATTGAAAAGGCATTTCCAAGTGGGTTTGAAGAGAGAGTGAAAGGGAGAGGGGTGGTGTTTGGGGGTTGGGTGCAACAGACAGCCATTTTGAGCTACCCATTAGTTGGGTGCTTTATCATGAACACCATGATACTGGTGAAAGAGCTCAAGGTTGCTATAGAGGTAGAGAGAGAAGAAAATGGATGGTTTTCAAAGGAAAGCTTGAGTAAAACCAGTACAACTATGATGGATAAGGAAAATGAGTTGGGTGTTTCTCTGAAGAATAACCTTGCGAAATGGAGACGGATACTACCAGAGCCAGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0008150 GO:0008152 GO:0008194 GO:0009058 GO:0009718 GO:0009719 GO:0009725 GO:0009735 GO:0009753 GO:0009812 GO:0009813 GO:0009987 GO:0010033 GO:0016137 GO:0016740 GO:0016757 GO:0016758 GO:0016763 GO:0032870 GO:0035251 GO:0035252 GO:0042221 GO:0042285 GO:0042440 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0046148 GO:0046283 GO:0046527 GO:0050896 GO:0051716 GO:0070887 GO:0071229 GO:0071310 GO:0071368 GO:0071395 GO:0071495 GO:0071704 GO:0080043 GO:0080044 GO:1901038 GO:1901135 GO:1901576 GO:1901657 GO:1901700 GO:1901701 GO:1901804

KEGG Pathways

Metabolic & Signaling

ko00942 map00942

Pfam Domains

Protein Families

UDPGT

Protein Analysis

317

Amino Acids

35.78

Weight (kDa)

7.06

Isoelectric Point (pI)

48.58

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	637
Acc36I	ACCTGC	2 cut(s)	216, 637
AccB7I	CCANNNNNTGG	2 cut(s)	431, 749
AclWI	GGATC	2 cut(s)	113, 541
AcsI	RAATTY	2 cut(s)	80, 258
AcuI	CTGAAG	1 cut(s)	923
AfaI	GTAC	3 cut(s)	75, 240, 862
AfiI	CCNNNNNNNGG	3 cut(s)	431, 556, 749
AflIII	ACRYGT	3 cut(s)	70, 350, 474
AgsI	TTSAA	4 cut(s)	622, 650, 674, 837
AjnI	CCWGG	2 cut(s)	214, 247
AluBI	AGCT	9 cut(s)	7, 24, 134, 574, 592, 635, 738, 790, 846
AluI	AGCT	9 cut(s)	7, 24, 134, 574, 592, 635, 738, 790, 846
Alw21I	GWGCWC	3 cut(s)	9, 26, 792
Alw26I	GTCTC	1 cut(s)	919
AlwI	GGATC	2 cut(s)	113, 541
AoxI	GGCC	1 cut(s)	404
ApeKI	GCWGC	2 cut(s)	134, 632
ApoI	RAATTY	2 cut(s)	80, 258
ArsI	GACNNNNNNTTYG	2 cut(s)	715, 747
AspLEI	GCGC	1 cut(s)	392
AspS9I	GGNCC	2 cut(s)	422, 559
AsuHPI	GGTGA	1 cut(s)	793
AvaII	GGWCC	2 cut(s)	422, 559
BanII	GRGCYC	3 cut(s)	9, 26, 792
BbsI	GAAGAC	1 cut(s)	477
Bbv12I	GWGCWC	3 cut(s)	9, 26, 792
BbvI	GCAGC	2 cut(s)	121, 644
BccI	CCATC	2 cut(s)	822, 865
BceAI	ACGGC	1 cut(s)	271
BciT130I	CCWGG	2 cut(s)	216, 249
BciVI	GTATCC	2 cut(s)	212, 924
BcoDI	GTCTC	1 cut(s)	919
BfmI	CTRYAG	4 cut(s)	129, 135, 630, 801
BfuAI	ACCTGC	2 cut(s)	216, 637
BfuI	GTATCC	2 cut(s)	212, 924
BisI	GCNGC	2 cut(s)	135, 633
BlsI	GCNGC	2 cut(s)	136, 634
Bme1390I	CCNGG	2 cut(s)	216, 249
Bme18I	GGWCC	2 cut(s)	422, 559
BmgT120I	GGNCC	2 cut(s)	422, 559
BmrFI	CCNGG	2 cut(s)	216, 249
BmrI	ACTGGG	1 cut(s)	606
BmsI	GCATC	2 cut(s)	220, 341
BmuI	ACTGGG	1 cut(s)	606
BpiI	GAAGAC	1 cut(s)	477
Bpu10I	CCTNAGC	1 cut(s)	386
BpuEI	CTTGAG	3 cut(s)	572, 776, 868
BsaAI	YACGTR	2 cut(s)	73, 203
BsaBI	GATNNNNATC	1 cut(s)	223
Bsc4I	CCNNNNNNNGG	3 cut(s)	431, 556, 749
Bse1I	ACTGG	5 cut(s)	424, 425, 601, 783, 858
Bse8I	GATNNNNATC	1 cut(s)	223
BseBI	CCWGG	2 cut(s)	216, 249
BseGI	GGATG	2 cut(s)	211, 833
BseJI	GATNNNNATC	1 cut(s)	223
BseLI	CCNNNNNNNGG	3 cut(s)	431, 556, 749
BseMII	CTCAG	1 cut(s)	377
BseNI	ACTGG	5 cut(s)	424, 425, 601, 783, 858
BseXI	GCAGC	2 cut(s)	121, 644
BseYI	CCCAGC	3 cut(s)	163, 181, 580
BshFI	GGCC	1 cut(s)	406
BsiHKAI	GWGCWC	3 cut(s)	9, 26, 792
BslFI	GGGAC	2 cut(s)	81, 526
BslI	CCNNNNNNNGG	3 cut(s)	431, 556, 749
BsmAI	GTCTC	1 cut(s)	919
BsmBI	CGTCTC	1 cut(s)	919
BsmFI	GGGAC	2 cut(s)	81, 526
BsnI	GGCC	1 cut(s)	406
Bsp1286I	GDGCHC	3 cut(s)	9, 26, 792
Bsp143I	GATC	2 cut(s)	105, 546
BspANI	GGCC	1 cut(s)	406
BspCNI	CTCAG	1 cut(s)	378
BspHI	TCATGA	1 cut(s)	762
BspMAI	CTGCAG	2 cut(s)	139, 634
BspMI	ACCTGC	2 cut(s)	216, 637
BspPI	GGATC	2 cut(s)	113, 541
BsrI	ACTGG	5 cut(s)	424, 425, 601, 783, 858
BssMI	GATC	2 cut(s)	105, 546
Bst2UI	CCWGG	2 cut(s)	216, 249
Bst4CI	ACNGT	1 cut(s)	517
Bst6I	CTCTTC	1 cut(s)	669
BstAPI	GCANNNNNTGC	1 cut(s)	638
BstBAI	YACGTR	2 cut(s)	73, 203
BstC8I	GCNNGC	1 cut(s)	147
BstDEI	CTNAG	2 cut(s)	386, 483
BstENI	CCTNNNNNAGG	1 cut(s)	554
BstF5I	GGATG	2 cut(s)	211, 833
BstHHI	GCGC	1 cut(s)	392
BstKTI	GATC	2 cut(s)	108, 549
BstMAI	GTCTC	1 cut(s)	919
BstMBI	GATC	2 cut(s)	105, 546
BstMWI	GCNNNNNNNGC	1 cut(s)	638
BstNI	CCWGG	2 cut(s)	216, 249
BstNSI	RCATGY	3 cut(s)	149, 354, 478
BstSCI	CCNGG	2 cut(s)	214, 247
BstSFI	CTRYAG	4 cut(s)	129, 135, 630, 801
BstV1I	GCAGC	2 cut(s)	121, 644
BstV2I	GAAGAC	1 cut(s)	477
BstXI	CCANNNNNNTGG	1 cut(s)	778
BsuI	GTATCC	2 cut(s)	212, 924
BsuRI	GGCC	1 cut(s)	406
BtsCI	GGATG	2 cut(s)	211, 833
BveI	ACCTGC	2 cut(s)	216, 637
Cac8I	GCNNGC	1 cut(s)	147
CciI	TCATGA	1 cut(s)	762
CfoI	GCGC	1 cut(s)	392
Cfr13I	GGNCC	2 cut(s)	422, 559
Csp6I	GTAC	3 cut(s)	74, 239, 861
CviAII	CATG	7 cut(s)	46, 146, 268, 351, 475, 763, 772
CviQI	GTAC	3 cut(s)	74, 239, 861
DdeI	CTNAG	2 cut(s)	386, 483
DpnI	GATC	2 cut(s)	107, 548
DpnII	GATC	2 cut(s)	105, 546
Eam1104I	CTCTTC	1 cut(s)	669
EarI	CTCTTC	1 cut(s)	669
Ecl136II	GAGCTC	3 cut(s)	7, 24, 790
Eco147I	AGGCCT	1 cut(s)	406
Eco24I	GRGCYC	3 cut(s)	9, 26, 792
Eco47I	GGWCC	2 cut(s)	422, 559
Eco53kI	GAGCTC	3 cut(s)	7, 24, 790
Eco57I	CTGAAG	1 cut(s)	923
EcoICRI	GAGCTC	3 cut(s)	7, 24, 790
EcoNI	CCTNNNNNAGG	1 cut(s)	554
EcoRI	GAATTC	1 cut(s)	80
EcoRII	CCWGG	2 cut(s)	214, 247
EcoT38I	GRGCYC	3 cut(s)	9, 26, 792
Esp3I	CGTCTC	1 cut(s)	919
FaeI	CATG	7 cut(s)	49, 149, 271, 354, 478, 766, 775
FalI	AAGNNNNNCTT	2 cut(s)	830, 862
FaqI	GGGAC	2 cut(s)	81, 526
FatI	CATG	7 cut(s)	45, 145, 267, 350, 474, 762, 771
Fnu4HI	GCNGC	2 cut(s)	135, 633
FokI	GGATG	2 cut(s)	198, 840
FriOI	GRGCYC	3 cut(s)	9, 26, 792
Fsp4HI	GCNGC	2 cut(s)	135, 633
GlaI	GCGC	1 cut(s)	391
GluI	GCNGC	2 cut(s)	135, 633
GsaI	CCCAGC	3 cut(s)	167, 185, 584
HaeIII	GGCC	1 cut(s)	406
HhaI	GCGC	1 cut(s)	392
Hin1II	CATG	7 cut(s)	49, 149, 271, 354, 478, 766, 775
Hin6I	GCGC	1 cut(s)	390
HinP1I	GCGC	1 cut(s)	390
HincII	GTYRAC	1 cut(s)	603
HindII	GTYRAC	1 cut(s)	603
HindIII	AAGCTT	1 cut(s)	844
HinfI	GANTC	2 cut(s)	443, 538
HpaI	GTTAAC	1 cut(s)	603
HphI	GGTGA	1 cut(s)	793
Hpy166II	GTNNAC	1 cut(s)	603
Hpy188I	TCNGA	1 cut(s)	903
Hpy188III	TCNNGA	2 cut(s)	254, 763
Hpy8I	GTNNAC	1 cut(s)	603
HpyAV	CCTTC	2 cut(s)	359, 550
HpyCH4III	ACNGT	1 cut(s)	517
HpyCH4IV	ACGT	2 cut(s)	72, 202
HpyCH4V	TGCA	6 cut(s)	137, 145, 211, 530, 632, 718
HpyF10VI	GCNNNNNNNGC	1 cut(s)	638
HpyF3I	CTNAG	2 cut(s)	386, 483
HpySE526I	ACGT	2 cut(s)	72, 202
Hsp92II	CATG	7 cut(s)	49, 149, 271, 354, 478, 766, 775
HspAI	GCGC	1 cut(s)	390
KspAI	GTTAAC	1 cut(s)	603
Kzo9I	GATC	2 cut(s)	105, 546
LmnI	GCTCC	2 cut(s)	4, 269
Lsp1109I	GCAGC	2 cut(s)	121, 644
LweI	GCATC	2 cut(s)	220, 341
MaeII	ACGT	2 cut(s)	72, 202
MaeIII	GTNAC	2 cut(s)	203, 343
MalI	GATC	2 cut(s)	107, 548
MboI	GATC	2 cut(s)	105, 546
MboII	GAAGA	4 cut(s)	482, 686, 830, 916
MfeI	CAATTG	2 cut(s)	542, 645
MhlI	GDGCHC	3 cut(s)	9, 26, 792
MluCI	AATT	7 cut(s)	31, 80, 171, 258, 542, 563, 645
MlyI	GAGTC	1 cut(s)	437
MmeI	TCCRAC	1 cut(s)	417
MnlI	CCTC	3 cut(s)	496, 686, 799
MseI	TTAA	3 cut(s)	62, 416, 602
MslI	CAYNNNNRTG	2 cut(s)	44, 272
MspA1I	CMGCKG	1 cut(s)	134
MspR9I	CCNGG	2 cut(s)	216, 249
MunI	CAATTG	2 cut(s)	542, 645
MvaI	CCWGG	2 cut(s)	216, 249
MwoI	GCNNNNNNNGC	1 cut(s)	638
NdeII	GATC	2 cut(s)	105, 546
NlaIII	CATG	7 cut(s)	49, 149, 271, 354, 478, 766, 775
NmuCI	GTSAC	2 cut(s)	203, 343
NspI	RCATGY	3 cut(s)	149, 354, 478
PaeI	GCATGC	1 cut(s)	149
PagI	TCATGA	1 cut(s)	762
PaqCI	CACCTGC	1 cut(s)	637
PceI	AGGCCT	1 cut(s)	406
PciI	ACATGT	2 cut(s)	350, 474
PfeI	GAWTC	1 cut(s)	538
PflMI	CCANNNNNTGG	2 cut(s)	431, 749
PfoI	TCCNGGA	1 cut(s)	214
PkrI	GCNGC	2 cut(s)	136, 634
PleI	GAGTC	1 cut(s)	437
PpsI	GAGTC	1 cut(s)	437
Ppu21I	YACGTR	2 cut(s)	73, 203
PscI	ACATGT	2 cut(s)	350, 474
Psp124BI	GAGCTC	3 cut(s)	9, 26, 792
Psp6I	CCWGG	2 cut(s)	214, 247
PspFI	CCCAGC	3 cut(s)	163, 181, 580
PspGI	CCWGG	2 cut(s)	214, 247
PspPI	GGNCC	2 cut(s)	422, 559
PstI	CTGCAG	2 cut(s)	139, 634
PvuII	CAGCTG	1 cut(s)	134
RsaI	GTAC	3 cut(s)	75, 240, 862
RsaNI	GTAC	3 cut(s)	74, 239, 861
RseI	CAYNNNNRTG	2 cut(s)	44, 272
SacI	GAGCTC	3 cut(s)	9, 26, 792
SaqAI	TTAA	3 cut(s)	62, 416, 602
SatI	GCNGC	2 cut(s)	135, 633
Sau3AI	GATC	2 cut(s)	105, 546
Sau96I	GGNCC	2 cut(s)	422, 559
SchI	GAGTC	1 cut(s)	437
ScrFI	CCNGG	2 cut(s)	216, 249
SduI	GDGCHC	3 cut(s)	9, 26, 792
SfaNI	GCATC	2 cut(s)	220, 341
SfcI	CTRYAG	4 cut(s)	129, 135, 630, 801
SinI	GGWCC	2 cut(s)	422, 559
SmiMI	CAYNNNNRTG	2 cut(s)	44, 272
SmlI	CTYRAG	3 cut(s)	551, 791, 847
SmoI	CTYRAG	3 cut(s)	551, 791, 847
SphI	GCATGC	1 cut(s)	149
Sse9I	AATT	7 cut(s)	31, 80, 171, 258, 542, 563, 645
SseBI	AGGCCT	1 cut(s)	406
SstI	GAGCTC	3 cut(s)	9, 26, 792
StuI	AGGCCT	1 cut(s)	406
StyD4I	CCNGG	2 cut(s)	214, 247
TaaI	ACNGT	1 cut(s)	517
TaiI	ACGT	2 cut(s)	75, 205
TaqI	TCGA	2 cut(s)	363, 446
TasI	AATT	7 cut(s)	31, 80, 171, 258, 542, 563, 645
TatI	WGTACW	1 cut(s)	860
TfiI	GAWTC	1 cut(s)	538
Tru1I	TTAA	3 cut(s)	62, 416, 602
Tru9I	TTAA	3 cut(s)	62, 416, 602
TseFI	GTSAC	2 cut(s)	203, 343
TseI	GCWGC	2 cut(s)	134, 632
Tsp45I	GTSAC	2 cut(s)	203, 343
TspDTI	ATGAA	2 cut(s)	27, 779
TspGWI	ACGGA	1 cut(s)	943
Van91I	CCANNNNNTGG	2 cut(s)	431, 749
VpaK11BI	GGWCC	2 cut(s)	422, 559
XagI	CCTNNNNNAGG	1 cut(s)	554
XapI	RAATTY	2 cut(s)	80, 258
XceI	RCATGY	3 cut(s)	149, 354, 478

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.