Prupe.4G243600_v2.0.a1

Belongs to the cytochrome P450 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
N/A
Physical Location & Seq
Reverse (-)
16102814 .. 16104179
1366 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G243600.1_v2.0.a1.CDS.1

Sequence Viewer

Length: 1122 bp
TCATACCCCATAATCGGAAACCTACCTGGCTTCCGTATCAACTACCACCGATTCCATGACTGGGTTGCTGATATGCTCTCCCAAACCTCATCTTCAACTCTTCAAGTCAAAACCTTGCTCAATCTCTCCCATGACATCTGCATTGCCAGTCATTCAAAGGTCGAGCACCTCCTTATATCCAATTTCCCAAACTACATGAAAGGCTCTCGCTTCTATGATGTTCTTCATGACCTCCTCATCCATGGCGTCTTCAACGTTGATGGGAACCTCTGGACCATCCAATGCAAGATTGCTAGCCATGAATTCAACACCAAATCGCTCAAACACTTCATCTCAAACACCGTCAACTCCGAGATCTCGAACCACCTCATTCCATACCTCTCCAAAATCTATGATAAAAACAGAGTGATCAATCTTCAAAATGTATTGCGAAAATTCGGATTTGATAACATATGCAACGTAGCATTTGGCACAGACCCTGCTTGCTTGGATTTAGAAAACATGCACCATACTCAAAGCATGTCAGGATTGAGCTTTGCCAAATCTTTTGATGACACAGTTGATATTTGTTCATCTAGATTTATGTCACCTCTGAGCCTTGTGTGGAAGATGAAGAGGTTCTTCAACATTGGTTCTGAAAAGCAATTCAAACAAGCAACAGAAGAAATCATATACTATGATGAGCTGAAGAAGCTTCATTACATGCATGCAGATTTATCAGAGTCCATGCGGTTGTTTCCACCTGTGCCTATCAATTCAAGATTAATAGTGGATGATGAAGTTTTGCTAGATGGATGCCACGTGAGGAAAGGGTGGTTTGCTAATTACTTTGCCTATGCAATGGAGTTTAAACCTGAGAGGTGGCTGGATGGTGATGGGGTGTTTCAGCCATCATATCAATTTCGGTTCCCAGTGTTCCATTATGGGCCTAGTATGTGTTTGGGGAATGAGATGGCTTATGTGCAGATGAAGTTAGTTGTAGCAGCTGTGATGTATGAGTTTGAGGTTATGGTTGTTAATAGTGGTGCCACTGTGGAGAAGATGATGAACCCTCCTTACATCTTATCACTTGTGCTTAAGATGAAGGGTAGATTGGTTGTGAGGCTGCATAAAAGACAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
p450

Protein Analysis

374

Amino Acids

43.16

Weight (kDa)

8.08

Isoelectric Point (pI)

50.38

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1025
AciI CCGC 1 cut(s) 730
AclI AACGTT 1 cut(s) 255
AcsI RAATTY 2 cut(s) 302, 434
AcuI CTGAAG 1 cut(s) 707
AcvI CACGTG 1 cut(s) 802
AcyI GRCGYC 1 cut(s) 246
AfiI CCNNNNNNNGG 2 cut(s) 14, 61
AflII CTTAAG 1 cut(s) 1076
AgsI TTSAA 9 cut(s) 96, 104, 156, 253, 307, 419, 625, 649, 759
AjnI CCWGG 1 cut(s) 25
AjuI GAANNNNNNNTTGG 2 cut(s) 1076, 1108
AluBI AGCT 4 cut(s) 534, 685, 694, 986
AluI AGCT 4 cut(s) 534, 685, 694, 986
Alw21I GWGCWC 1 cut(s) 168
AlwNI CAGNNNCTG 1 cut(s) 479
AoxI GGCC 1 cut(s) 926
ApeKI GCWGC 2 cut(s) 983, 1105
ApoI RAATTY 2 cut(s) 302, 434
AseI ATTAAT 1 cut(s) 764
Asp700I GAANNNNTTC 1 cut(s) 617
AspS9I GGNCC 2 cut(s) 273, 926
AsuHPI GGTGA 2 cut(s) 579, 884
AsuNHI GCTAGC 1 cut(s) 293
AvaII GGWCC 1 cut(s) 273
BanI GGYRCC 1 cut(s) 1025
BarI GAAGNNNNNNTAC 2 cut(s) 683, 715
BbrPI CACGTG 1 cut(s) 802
BbsI GAAGAC 1 cut(s) 241
Bbv12I GWGCWC 1 cut(s) 168
BbvI GCAGC 2 cut(s) 995, 1092
BccI CCATC 7 cut(s) 254, 284, 785, 863, 869, 898, 946
BciT130I CCWGG 1 cut(s) 27
BclI TGATCA 1 cut(s) 408
BfaI CTAG 4 cut(s) 294, 576, 788, 930
BfrI CTTAAG 1 cut(s) 1076
BglII AGATCT 1 cut(s) 354
BisI GCNGC 2 cut(s) 984, 1106
BlsI GCNGC 2 cut(s) 985, 1107
Bme1390I CCNGG 1 cut(s) 27
Bme18I GGWCC 1 cut(s) 273
BmgT120I GGNCC 2 cut(s) 273, 926
BmiI GGNNCC 3 cut(s) 266, 908, 1027
BmrFI CCNGG 1 cut(s) 27
BmrI ACTGGG 2 cut(s) 70, 905
BmsI GCATC 1 cut(s) 785
BmtI GCTAGC 1 cut(s) 297
BmuI ACTGGG 2 cut(s) 70, 905
BpiI GAAGAC 1 cut(s) 241
BsaAI YACGTR 1 cut(s) 802
BsaHI GRCGYC 1 cut(s) 246
BsaJI CCNNGG 1 cut(s) 241
Bsc4I CCNNNNNNNGG 2 cut(s) 14, 61
Bse1I ACTGG 3 cut(s) 65, 147, 911
Bse3DI GCAATG 2 cut(s) 141, 846
BseBI CCWGG 1 cut(s) 27
BseDI CCNNGG 1 cut(s) 241
BseGI GGATG 5 cut(s) 237, 276, 778, 800, 874
BseLI CCNNNNNNNGG 2 cut(s) 14, 61
BseMI GCAATG 2 cut(s) 141, 846
BseMII CTCAG 2 cut(s) 584, 846
BseNI ACTGG 3 cut(s) 65, 147, 911
BseRI GAGGAG 1 cut(s) 224
BseXI GCAGC 2 cut(s) 995, 1092
BsgI GTGCAG 1 cut(s) 983
BshFI GGCC 1 cut(s) 928
BshNI GGYRCC 1 cut(s) 1025
BsiHKAI GWGCWC 1 cut(s) 168
BslI CCNNNNNNNGG 2 cut(s) 14, 61
BsnI GGCC 1 cut(s) 928
Bsp1286I GDGCHC 1 cut(s) 168
Bsp143I GATC 2 cut(s) 354, 408
Bsp19I CCATGG 1 cut(s) 241
BspACI CCGC 1 cut(s) 730
BspANI GGCC 1 cut(s) 928
BspCNI CTCAG 2 cut(s) 585, 847
BspHI TCATGA 1 cut(s) 226
BspLI GGNNCC 3 cut(s) 266, 908, 1027
BspOI GCTAGC 1 cut(s) 297
BspT107I GGYRCC 1 cut(s) 1025
BspTI CTTAAG 1 cut(s) 1076
BsrDI GCAATG 2 cut(s) 141, 846
BsrI ACTGG 3 cut(s) 65, 147, 911
BssECI CCNNGG 1 cut(s) 241
BssMI GATC 2 cut(s) 354, 408
BssNI GRCGYC 1 cut(s) 246
BssT1I CCWWGG 1 cut(s) 241
Bst2UI CCWGG 1 cut(s) 27
Bst4CI ACNGT 3 cut(s) 343, 559, 1033
Bst6I CTCTTC 2 cut(s) 105, 608
BstACI GRCGYC 1 cut(s) 246
BstAFI CTTAAG 1 cut(s) 1076
BstBAI YACGTR 1 cut(s) 802
BstC8I GCNNGC 3 cut(s) 295, 484, 708
BstDEI CTNAG 2 cut(s) 593, 855
BstDSI CCRYGG 1 cut(s) 241
BstF5I GGATG 5 cut(s) 237, 276, 778, 800, 874
BstKTI GATC 2 cut(s) 357, 411
BstMBI GATC 2 cut(s) 354, 408
BstMWI GCNNNNNNNGC 1 cut(s) 691
BstNI CCWGG 1 cut(s) 27
BstNSI RCATGY 4 cut(s) 505, 523, 706, 710
BstSCI CCNGG 1 cut(s) 25
BstV1I GCAGC 2 cut(s) 995, 1092
BstV2I GAAGAC 1 cut(s) 241
BstX2I RGATCY 1 cut(s) 354
BstYI RGATCY 1 cut(s) 354
BsuRI GGCC 1 cut(s) 928
BtgI CCRYGG 1 cut(s) 241
BtsCI GGATG 5 cut(s) 237, 276, 778, 800, 874
BtsIMutI CAGTG 2 cut(s) 918, 1029
Cac8I GCNNGC 3 cut(s) 295, 484, 708
CaiI CAGNNNCTG 1 cut(s) 479
CciI TCATGA 1 cut(s) 226
Cfr13I GGNCC 2 cut(s) 273, 926
CseI GACGC 1 cut(s) 235
DdeI CTNAG 2 cut(s) 593, 855
DpnI GATC 2 cut(s) 356, 410
DpnII GATC 2 cut(s) 354, 408
DraI TTTAAA 1 cut(s) 850
Eam1104I CTCTTC 2 cut(s) 105, 608
EarI CTCTTC 2 cut(s) 105, 608
Eco130I CCWWGG 1 cut(s) 241
Eco47I GGWCC 1 cut(s) 273
Eco57I CTGAAG 1 cut(s) 707
Eco72I CACGTG 1 cut(s) 802
EcoRI GAATTC 1 cut(s) 302
EcoRII CCWGG 1 cut(s) 25
EcoT14I CCWWGG 1 cut(s) 241
EcoT22I ATGCAT 1 cut(s) 708
ErhI CCWWGG 1 cut(s) 241
FalI AAGNNNNNCTT 2 cut(s) 605, 637
FauNDI CATATG 1 cut(s) 452
FbaI TGATCA 1 cut(s) 408
Fnu4HI GCNGC 2 cut(s) 984, 1106
FokI GGATG 5 cut(s) 224, 263, 785, 807, 881
Fsp4HI GCNGC 2 cut(s) 984, 1106
FspBI CTAG 4 cut(s) 294, 576, 788, 930
GluI GCNGC 2 cut(s) 984, 1106
HaeIII GGCC 1 cut(s) 928
HgaI GACGC 1 cut(s) 235
Hin1I GRCGYC 1 cut(s) 246
HincII GTYRAC 1 cut(s) 346
HindII GTYRAC 1 cut(s) 346
HindIII AAGCTT 1 cut(s) 692
HinfI GANTC 2 cut(s) 51, 722
HphI GGTGA 2 cut(s) 579, 884
Hpy166II GTNNAC 1 cut(s) 346
Hpy188I TCNGA 6 cut(s) 17, 352, 440, 594, 637, 721
Hpy188III TCNNGA 6 cut(s) 227, 271, 358, 525, 576, 759
Hpy8I GTNNAC 1 cut(s) 346
HpyAV CCTTC 1 cut(s) 1078
HpyCH4III ACNGT 3 cut(s) 343, 559, 1033
HpyCH4IV ACGT 3 cut(s) 255, 459, 801
HpyCH4V TGCA 9 cut(s) 141, 285, 456, 505, 706, 710, 839, 964, 1108
HpyF10VI GCNNNNNNNGC 1 cut(s) 691
HpyF3I CTNAG 2 cut(s) 593, 855
HpySE526I ACGT 3 cut(s) 255, 459, 801
Hsp92I GRCGYC 1 cut(s) 246
Ksp22I TGATCA 1 cut(s) 408
Kzo9I GATC 2 cut(s) 354, 408
Lsp1109I GCAGC 2 cut(s) 995, 1092
LweI GCATC 1 cut(s) 785
MaeI CTAG 4 cut(s) 294, 576, 788, 930
MaeII ACGT 3 cut(s) 255, 459, 801
MaeIII GTNAC 1 cut(s) 585
MalI GATC 2 cut(s) 356, 410
MboI GATC 2 cut(s) 354, 408
MflI RGATCY 1 cut(s) 354
MhlI GDGCHC 1 cut(s) 168
MluCI AATT 7 cut(s) 181, 302, 434, 644, 754, 823, 899
MlyI GAGTC 1 cut(s) 731
Mph1103I ATGCAT 1 cut(s) 708
MroXI GAANNNNTTC 1 cut(s) 617
MseI TTAA 4 cut(s) 764, 849, 1017, 1077
MspA1I CMGCKG 1 cut(s) 986
MspCI CTTAAG 1 cut(s) 1076
MspR9I CCNGG 1 cut(s) 27
MssI GTTTAAAC 1 cut(s) 850
MvaI CCWGG 1 cut(s) 27
MwoI GCNNNNNNNGC 1 cut(s) 691
NcoI CCATGG 1 cut(s) 241
NdeI CATATG 1 cut(s) 452
NdeII GATC 2 cut(s) 354, 408
NheI GCTAGC 1 cut(s) 293
NlaIV GGNNCC 3 cut(s) 266, 908, 1027
NmuCI GTSAC 1 cut(s) 585
NsiI ATGCAT 1 cut(s) 708
NspI RCATGY 4 cut(s) 505, 523, 706, 710
PaeI GCATGC 1 cut(s) 710
PagI TCATGA 1 cut(s) 226
PdmI GAANNNNTTC 1 cut(s) 617
PfeI GAWTC 1 cut(s) 51
PkrI GCNGC 2 cut(s) 985, 1107
PleI GAGTC 1 cut(s) 730
PmaCI CACGTG 1 cut(s) 802
PmeI GTTTAAAC 1 cut(s) 850
PmlI CACGTG 1 cut(s) 802
PpsI GAGTC 1 cut(s) 730
Ppu21I YACGTR 1 cut(s) 802
PshBI ATTAAT 1 cut(s) 764
Psp1406I AACGTT 1 cut(s) 255
Psp6I CCWGG 1 cut(s) 25
PspCI CACGTG 1 cut(s) 802
PspGI CCWGG 1 cut(s) 25
PspN4I GGNNCC 3 cut(s) 266, 908, 1027
PspPI GGNCC 2 cut(s) 273, 926
PsrI GAACNNNNNNTAC 2 cut(s) 1040, 1072
PstNI CAGNNNCTG 1 cut(s) 479
PsuI RGATCY 1 cut(s) 354
PvuII CAGCTG 1 cut(s) 986
SaqAI TTAA 4 cut(s) 764, 849, 1017, 1077
SatI GCNGC 2 cut(s) 984, 1106
Sau3AI GATC 2 cut(s) 354, 408
Sau96I GGNCC 2 cut(s) 273, 926
SchI GAGTC 1 cut(s) 731
ScrFI CCNGG 1 cut(s) 27
SduI GDGCHC 1 cut(s) 168
SfaNI GCATC 1 cut(s) 785
SinI GGWCC 1 cut(s) 273
SmlI CTYRAG 1 cut(s) 1076
SmoI CTYRAG 1 cut(s) 1076
SphI GCATGC 1 cut(s) 710
Sse9I AATT 7 cut(s) 181, 302, 434, 644, 754, 823, 899
SsiI CCGC 1 cut(s) 730
SspMI CTAG 4 cut(s) 294, 576, 788, 930
StyD4I CCNGG 1 cut(s) 25
StyI CCWWGG 1 cut(s) 241
TaaI ACNGT 3 cut(s) 343, 559, 1033
TaiI ACGT 3 cut(s) 258, 462, 804
TaqI TCGA 2 cut(s) 162, 359
TasI AATT 7 cut(s) 181, 302, 434, 644, 754, 823, 899
TfiI GAWTC 1 cut(s) 51
Tru1I TTAA 4 cut(s) 764, 849, 1017, 1077
Tru9I TTAA 4 cut(s) 764, 849, 1017, 1077
TscAI CASTG 2 cut(s) 918, 1036
TseFI GTSAC 1 cut(s) 585
TseI GCWGC 2 cut(s) 983, 1105
Tsp45I GTSAC 1 cut(s) 585
TspGWI ACGGA 1 cut(s) 23
TspRI CASTG 2 cut(s) 918, 1036
Vha464I CTTAAG 1 cut(s) 1076
VpaK11BI GGWCC 1 cut(s) 273
VspI ATTAAT 1 cut(s) 764
XapI RAATTY 2 cut(s) 302, 434
XbaI TCTAGA 1 cut(s) 575
XceI RCATGY 4 cut(s) 505, 523, 706, 710
XmnI GAANNNNTTC 1 cut(s) 617
XspI CTAG 4 cut(s) 294, 576, 788, 930
Zsp2I ATGCAT 1 cut(s) 708
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.