Prupe.4G246800_v2.0.a1

KH-domain-like of EngA bacterial GTPase enzymes, C-terminal

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
N/A
Physical Location & Seq
Reverse (-)
16376874 .. 16378303
1430 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G246800.1_v2.0.a1.CDS.2

Sequence Viewer

Length: 234 bp
ATGAGATGTTTTCTTTTCCACATGTATATTTCTTGTGTATCTCTTAGGATAGAAAGAGAAGGTAAAGGCTGCCTGATAGTTGTAAACAAATGGGATACCATACCGAATAAAAACCAGCATACTGCAACATACTATGAGCAGGATGTTAGGGAAAAGCTTCGTGTTCTTGGTTGGGCACCTATTGTGTATTCAACTGCAATAGCTGTTCAAAGTGTTGACAAATATGGAGAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

78

Amino Acids

8.98

Weight (kDa)

8.5

Isoelectric Point (pI)

32.15

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 175
AflIII ACRYGT 1 cut(s) 21
AgsI TTSAA 2 cut(s) 192, 209
AluBI AGCT 2 cut(s) 157, 203
AluI AGCT 2 cut(s) 157, 203
ApeKI GCWGC 1 cut(s) 69
Asp700I GAANNNNTTC 1 cut(s) 156
BaeGI GKGCMC 1 cut(s) 178
BanI GGYRCC 1 cut(s) 175
BbvI GCAGC 1 cut(s) 56
BciVI GTATCC 1 cut(s) 88
BfuI GTATCC 1 cut(s) 88
BisI GCNGC 1 cut(s) 70
BlsI GCNGC 1 cut(s) 71
BmiI GGNNCC 1 cut(s) 177
BseGI GGATG 1 cut(s) 148
BseSI GKGCMC 1 cut(s) 178
BseXI GCAGC 1 cut(s) 56
BshNI GGYRCC 1 cut(s) 175
Bsp1286I GDGCHC 1 cut(s) 178
BspLI GGNNCC 1 cut(s) 177
BspT107I GGYRCC 1 cut(s) 175
BstDEI CTNAG 1 cut(s) 44
BstF5I GGATG 1 cut(s) 148
BstNSI RCATGY 1 cut(s) 25
BstSLI GKGCMC 1 cut(s) 178
BstV1I GCAGC 1 cut(s) 56
BsuI GTATCC 1 cut(s) 88
BtsCI GGATG 1 cut(s) 148
CviAII CATG 1 cut(s) 22
CviJI RGCY 3 cut(s) 69, 157, 203
CviKI_1 RGCY 3 cut(s) 69, 157, 203
DdeI CTNAG 1 cut(s) 44
FaeI CATG 1 cut(s) 25
FaiI YATR 7 cut(s) 23, 27, 101, 120, 130, 135, 225
FatI CATG 1 cut(s) 21
Fnu4HI GCNGC 1 cut(s) 70
FokI GGATG 1 cut(s) 155
Fsp4HI GCNGC 1 cut(s) 70
GluI GCNGC 1 cut(s) 70
Hin1II CATG 1 cut(s) 25
HincII GTYRAC 1 cut(s) 217
HindII GTYRAC 1 cut(s) 217
HindIII AAGCTT 1 cut(s) 155
Hpy166II GTNNAC 2 cut(s) 85, 217
Hpy8I GTNNAC 2 cut(s) 85, 217
HpyAV CCTTC 1 cut(s) 53
HpyCH4V TGCA 2 cut(s) 125, 197
HpyF3I CTNAG 1 cut(s) 44
Hsp92II CATG 1 cut(s) 25
LpnPI CCDG 3 cut(s) 86, 125, 128
Lsp1109I GCAGC 1 cut(s) 56
MhlI GDGCHC 1 cut(s) 178
MroXI GAANNNNTTC 1 cut(s) 156
NlaIII CATG 1 cut(s) 25
NlaIV GGNNCC 1 cut(s) 177
NspI RCATGY 1 cut(s) 25
PciI ACATGT 1 cut(s) 21
PdmI GAANNNNTTC 1 cut(s) 156
PkrI GCNGC 1 cut(s) 71
PscI ACATGT 1 cut(s) 21
PspN4I GGNNCC 1 cut(s) 177
SatI GCNGC 1 cut(s) 70
SduI GDGCHC 1 cut(s) 178
SetI ASST 4 cut(s) 64, 159, 181, 205
SgeI CNNG 7 cut(s) 34, 45, 85, 127, 152, 173, 179
TseI GCWGC 1 cut(s) 69
XceI RCATGY 1 cut(s) 25
XmnI GAANNNNTTC 1 cut(s) 156
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.