Prupe.4G260200_v2.0.a1

No description available

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
N/A
Physical Location & Seq
Reverse (-)
18727818 .. 18729290
1473 bp
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UTR
Exon/CDS
Intron
Prupe.4G260200.1_v2.0.a1.CDS.2

Sequence Viewer

Length: 324 bp
ATGGAGTCGTTTTGGCAATTCAATGGCTTGGCTTCCAACTTTGTATACCATCCAACCAAAATTCGATTTGAACCAACTCACATTGTAATTTCTAACAAGAGACCTGATGAGAGAAGAAATTTTGATACAGTAAATGGTAAAGATGATCTTGATAGTCCTCCTTGCTATCCTGAAATAGAAGAGATTCCTGAACCAGAAGAGTTTACCTTTTTTCAGTGGCTCTCTCCTCCATCTTCTCCACTACGTTGGGAGTCCCCGCCATTCTCTCCTTTAGCATTGCCACTTGAGGTGGTAGAATTTGTGTTGAGGGAAGGAAATGATTGA

Protein Analysis

108

Amino Acids

12.54

Weight (kDa)

4.51

Isoelectric Point (pI)

89.55

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 45
AciI CCGC 1 cut(s) 257
AcsI RAATTY 3 cut(s) 60, 118, 296
AgsI TTSAA 2 cut(s) 22, 71
Alw26I GTCTC 1 cut(s) 94
ApoI RAATTY 3 cut(s) 60, 118, 296
Asp700I GAANNNNTTC 1 cut(s) 183
BccI CCATC 2 cut(s) 57, 238
BcoDI GTCTC 1 cut(s) 94
BpuEI CTTGAG 1 cut(s) 305
BsaI GGTCTC 1 cut(s) 94
Bse3DI GCAATG 1 cut(s) 275
BseGI GGATG 1 cut(s) 49
BseMI GCAATG 1 cut(s) 275
BseRI GAGGAG 1 cut(s) 216
BslFI GGGAC 1 cut(s) 238
BsmAI GTCTC 1 cut(s) 94
BsmFI GGGAC 1 cut(s) 238
Bso31I GGTCTC 1 cut(s) 94
Bsp143I GATC 1 cut(s) 145
BspACI CCGC 1 cut(s) 257
BspTNI GGTCTC 1 cut(s) 94
BsrDI GCAATG 1 cut(s) 275
BssMI GATC 1 cut(s) 145
BssNAI GTATAC 1 cut(s) 46
Bst1107I GTATAC 1 cut(s) 46
Bst4CI ACNGT 1 cut(s) 130
Bst6I CTCTTC 2 cut(s) 174, 192
BstF5I GGATG 1 cut(s) 49
BstKTI GATC 1 cut(s) 148
BstMAI GTCTC 1 cut(s) 94
BstMBI GATC 1 cut(s) 145
BstXI CCANNNNNNTGG 1 cut(s) 246
BstZ17I GTATAC 1 cut(s) 46
BtsCI GGATG 1 cut(s) 49
BtsIMutI CAGTG 1 cut(s) 221
CviJI RGCY 3 cut(s) 27, 32, 220
CviKI_1 RGCY 3 cut(s) 27, 32, 220
DpnI GATC 1 cut(s) 147
DpnII GATC 1 cut(s) 145
Eam1104I CTCTTC 2 cut(s) 174, 192
EarI CTCTTC 2 cut(s) 174, 192
Eco31I GGTCTC 1 cut(s) 94
FaiI YATR 1 cut(s) 46
FalI AAGNNNNNCTT 2 cut(s) 132, 164
FaqI GGGAC 1 cut(s) 238
FauI CCCGC 1 cut(s) 264
FblI GTMKAC 1 cut(s) 45
FokI GGATG 1 cut(s) 36
HinfI GANTC 3 cut(s) 5, 184, 251
Hpy166II GTNNAC 2 cut(s) 46, 204
Hpy188III TCNNGA 3 cut(s) 149, 170, 188
Hpy8I GTNNAC 2 cut(s) 46, 204
HpyAV CCTTC 1 cut(s) 305
HpyCH4III ACNGT 1 cut(s) 130
HpyCH4IV ACGT 1 cut(s) 244
HpySE526I ACGT 1 cut(s) 244
Kzo9I GATC 1 cut(s) 145
LpnPI CCDG 4 cut(s) 117, 183, 201, 207
MaeII ACGT 1 cut(s) 244
MalI GATC 1 cut(s) 147
MboI GATC 1 cut(s) 145
MboII GAAGA 4 cut(s) 126, 191, 209, 225
MluCI AATT 5 cut(s) 17, 60, 87, 118, 296
MlyI GAGTC 2 cut(s) 14, 260
MmeI TCCRAC 2 cut(s) 60, 77
MnlI CCTC 4 cut(s) 168, 237, 280, 300
MroXI GAANNNNTTC 1 cut(s) 183
NdeII GATC 1 cut(s) 145
PdmI GAANNNNTTC 1 cut(s) 183
PfeI GAWTC 1 cut(s) 184
PleI GAGTC 2 cut(s) 13, 259
PpsI GAGTC 2 cut(s) 13, 259
Sau3AI GATC 1 cut(s) 145
SchI GAGTC 2 cut(s) 14, 260
SetI ASST 4 cut(s) 106, 209, 247, 291
SmlI CTYRAG 1 cut(s) 284
SmoI CTYRAG 1 cut(s) 284
Sse9I AATT 5 cut(s) 17, 60, 87, 118, 296
SsiI CCGC 1 cut(s) 257
TaaI ACNGT 1 cut(s) 130
TaiI ACGT 1 cut(s) 247
TaqI TCGA 1 cut(s) 64
TasI AATT 5 cut(s) 17, 60, 87, 118, 296
TfiI GAWTC 1 cut(s) 184
TscAI CASTG 1 cut(s) 221
TspRI CASTG 1 cut(s) 221
XapI RAATTY 3 cut(s) 60, 118, 296
XmiI GTMKAC 1 cut(s) 45
XmnI GAANNNNTTC 1 cut(s) 183
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.