Ribonuclease H protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
No orthologs found for this gene in the current database.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 140 |
| Acc36I | ACCTGC | 2 cut(s) | 9, 140 |
| AccII | CGCG | 1 cut(s) | 122 |
| AciI | CCGC | 1 cut(s) | 120 |
| AfaI | GTAC | 1 cut(s) | 220 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 271 |
| AgsI | TTSAA | 2 cut(s) | 142, 236 |
| AjuI | GAANNNNNNNTTGG | 1 cut(s) | 37 |
| AluBI | AGCT | 1 cut(s) | 51 |
| AluI | AGCT | 1 cut(s) | 51 |
| Alw21I | GWGCWC | 1 cut(s) | 261 |
| Alw44I | GTGCAC | 1 cut(s) | 257 |
| AoxI | GGCC | 1 cut(s) | 239 |
| ApaLI | GTGCAC | 1 cut(s) | 257 |
| AspS9I | GGNCC | 2 cut(s) | 161, 240 |
| AsuHPI | GGTGA | 2 cut(s) | 238, 284 |
| AvaII | GGWCC | 1 cut(s) | 161 |
| BaeGI | GKGCMC | 1 cut(s) | 261 |
| Bbv12I | GWGCWC | 1 cut(s) | 261 |
| BccI | CCATC | 1 cut(s) | 269 |
| BceAI | ACGGC | 1 cut(s) | 254 |
| BciVI | GTATCC | 1 cut(s) | 110 |
| BfuAI | ACCTGC | 2 cut(s) | 9, 140 |
| BfuI | GTATCC | 1 cut(s) | 110 |
| Bme18I | GGWCC | 1 cut(s) | 161 |
| BmgT120I | GGNCC | 2 cut(s) | 161, 240 |
| BmiI | GGNNCC | 1 cut(s) | 242 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 271 |
| BseGI | GGATG | 3 cut(s) | 116, 261, 280 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 271 |
| BseRI | GAGGAG | 2 cut(s) | 226, 229 |
| BseSI | GKGCMC | 1 cut(s) | 261 |
| BsgI | GTGCAG | 1 cut(s) | 168 |
| Bsh1236I | CGCG | 1 cut(s) | 122 |
| BshFI | GGCC | 1 cut(s) | 241 |
| BsiHKAI | GWGCWC | 1 cut(s) | 261 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 271 |
| BsnI | GGCC | 1 cut(s) | 241 |
| Bsp1286I | GDGCHC | 1 cut(s) | 261 |
| BspACI | CCGC | 1 cut(s) | 120 |
| BspANI | GGCC | 1 cut(s) | 241 |
| BspFNI | CGCG | 1 cut(s) | 122 |
| BspLI | GGNNCC | 1 cut(s) | 242 |
| BspMI | ACCTGC | 2 cut(s) | 9, 140 |
| Bst6I | CTCTTC | 1 cut(s) | 137 |
| BstC8I | GCNNGC | 1 cut(s) | 201 |
| BstDEI | CTNAG | 1 cut(s) | 109 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 269 |
| BstF5I | GGATG | 3 cut(s) | 116, 261, 280 |
| BstFNI | CGCG | 1 cut(s) | 122 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 119 |
| BstSLI | GKGCMC | 1 cut(s) | 261 |
| BstUI | CGCG | 1 cut(s) | 122 |
| BsuI | GTATCC | 1 cut(s) | 110 |
| BsuRI | GGCC | 1 cut(s) | 241 |
| BtgZI | GCGATG | 1 cut(s) | 137 |
| BtsCI | GGATG | 3 cut(s) | 116, 261, 280 |
| BveI | ACCTGC | 2 cut(s) | 9, 140 |
| Cac8I | GCNNGC | 1 cut(s) | 201 |
| Cfr13I | GGNCC | 2 cut(s) | 161, 240 |
| CseI | GACGC | 1 cut(s) | 173 |
| Csp6I | GTAC | 1 cut(s) | 219 |
| CviAII | CATG | 1 cut(s) | 296 |
| CviJI | RGCY | 4 cut(s) | 5, 51, 113, 241 |
| CviKI_1 | RGCY | 4 cut(s) | 5, 51, 113, 241 |
| CviQI | GTAC | 1 cut(s) | 219 |
| DdeI | CTNAG | 1 cut(s) | 109 |
| Eam1104I | CTCTTC | 1 cut(s) | 137 |
| EarI | CTCTTC | 1 cut(s) | 137 |
| Eco47I | GGWCC | 1 cut(s) | 161 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 269 |
| FaeI | CATG | 1 cut(s) | 299 |
| FaiI | YATR | 1 cut(s) | 297 |
| FatI | CATG | 1 cut(s) | 295 |
| FokI | GGATG | 3 cut(s) | 103, 248, 287 |
| HaeIII | GGCC | 1 cut(s) | 241 |
| HgaI | GACGC | 1 cut(s) | 173 |
| Hin1II | CATG | 1 cut(s) | 299 |
| HinfI | GANTC | 1 cut(s) | 279 |
| HphI | GGTGA | 2 cut(s) | 238, 284 |
| Hpy166II | GTNNAC | 1 cut(s) | 259 |
| Hpy188III | TCNNGA | 1 cut(s) | 10 |
| Hpy8I | GTNNAC | 1 cut(s) | 259 |
| Hpy99I | CGWCG | 1 cut(s) | 199 |
| HpyCH4IV | ACGT | 1 cut(s) | 194 |
| HpyCH4V | TGCA | 4 cut(s) | 18, 149, 259, 270 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 119 |
| HpyF3I | CTNAG | 1 cut(s) | 109 |
| HpySE526I | ACGT | 1 cut(s) | 194 |
| Hsp92II | CATG | 1 cut(s) | 299 |
| LmnI | GCTCC | 1 cut(s) | 48 |
| LpnPI | CCDG | 5 cut(s) | 4, 23, 135, 180, 185 |
| MaeII | ACGT | 1 cut(s) | 194 |
| MboII | GAAGA | 1 cut(s) | 154 |
| MhlI | GDGCHC | 1 cut(s) | 261 |
| MluCI | AATT | 5 cut(s) | 13, 26, 87, 104, 171 |
| MlyI | GAGTC | 1 cut(s) | 273 |
| MnlI | CCTC | 7 cut(s) | 76, 124, 204, 207, 254, 259, 300 |
| MvnI | CGCG | 1 cut(s) | 122 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 119 |
| NlaIII | CATG | 1 cut(s) | 299 |
| NlaIV | GGNNCC | 1 cut(s) | 242 |
| PaqCI | CACCTGC | 1 cut(s) | 140 |
| PleI | GAGTC | 1 cut(s) | 273 |
| PpsI | GAGTC | 1 cut(s) | 273 |
| PspN4I | GGNNCC | 1 cut(s) | 242 |
| PspPI | GGNCC | 2 cut(s) | 161, 240 |
| RsaI | GTAC | 1 cut(s) | 220 |
| RsaNI | GTAC | 1 cut(s) | 219 |
| Sau96I | GGNCC | 2 cut(s) | 161, 240 |
| SchI | GAGTC | 1 cut(s) | 273 |
| SduI | GDGCHC | 1 cut(s) | 261 |
| SetI | ASST | 5 cut(s) | 23, 53, 154, 197, 251 |
| SinI | GGWCC | 1 cut(s) | 161 |
| Sse9I | AATT | 5 cut(s) | 13, 26, 87, 104, 171 |
| SsiI | CCGC | 1 cut(s) | 120 |
| TaiI | ACGT | 1 cut(s) | 197 |
| TaqI | TCGA | 2 cut(s) | 81, 209 |
| TasI | AATT | 5 cut(s) | 13, 26, 87, 104, 171 |
| VneI | GTGCAC | 1 cut(s) | 257 |
| VpaK11BI | GGWCC | 1 cut(s) | 161 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 269 |