Prupe.5G017500_v2.0.a1

Belongs to the cytochrome P450 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
N/A
Physical Location & Seq
Reverse (-)
1873239 .. 1874789
1551 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G017500.1_v2.0.a1.CDS.1

Sequence Viewer

Length: 1551 bp
ATGGAGTTTTGGTTTCTTCTCCTTGCCTTTGTTTGCCTCTACATTTCTTTTACTGCGCTACTAAAGCTCCTAAGCAGTAAAAGACTACCACCAAGTCCCCCAACCTTGCCTATCTTAGGGAACATCTATTGGCTTCTCAAATCTTCTAGCAACTTCGCTAATGTTGAGCCCGTTCTCCACCATTTGCGTTCCAATTATGGCCCTATTGTTACTCTCCATATCGGGTCTCGTCCTGCCATTTTCATCACTACCCACGAAGCTGCTCATCGAGCACTTGTGAGAAATGGTACAGTCTTTGCTGGTCGCCCTGCTGCTCTCGAAACCACCCGAATCTTCTTTAGCAACCAGTGCACTGTTAGCTCTGCACCATATGGCCCAATTTGGCGTCTTCTTCGTCAAAATCTTATGTCCATAATGCATACTTCTCGACTCGAGACGTATTCGCATGGTCGTAGATGGGCATATAATCTTTTAAAGGACAAGATCTTAGATGAAACAGAATCTGGCAACAAGGCCATCCATGTGGTGCACAATTTTCAATTTGTCATGTTTGGTTTACTATCTTATATGTGTTTTGGAGTCAAATTTGATGGTAAAACCATTAAAGATATTGAAAGCGTGCAACAAGCACTGCTTTTGAATTTCGTTAGGTTCAACAAACTAAATTTTATGCCGACCATATCAAAGATCGTGTTTCGAAAGTTGTGGAAGGAACTCTTACAGATTCGTCGTAATCAAGTAGGTGTCATTCTCTCAATCATAAAAGCACGTCATGAATGGTTAATGAGTAAAAAAATCAACAAGGAATTTGAAGACGAAGAATGTATTCTCTCTTATGTTGATAGTCTAATGGATCTTCAGCTCCCCGACGGTGGTGGAAGAAAGCTTACGGATGATGAAAAGGTAAGTTTGTGTTCGGAGTTTCTGCTAGGCGGAACCGATACATCGACCACCACATTACAATGGGTTATGGCCAACTTAGTGAAGAACCAAGACATTCAGAAGAAGCTTTTAGATGAAATCAACTCTGTTGTAAAACCAAAACAAGATATTGCAGAAGATGATTTAATAAAGATGCCTTATTTGAAGGCAGTTGTGTTAGAAACTCTACGCCGACATCCACCAAGCCACTTCATCTTGCCACGGGCTGTCTTGAAAGATATTCAAATGGATGGTTATGACATACCAAAAGATGCAATGGTGAATTTTACAGTGGCAGAAATGTCACGTGATCCAAATGTGTGGGAAAGACCGATGGAGTTTAGACCAGGGAGATTCATACAAACTGGTCAACAAGAGGTGAAGTTTGATATCAAGGGAGTTAGAGGTATTCAAATGATGCCCTTTGGTGCGGGGAGGAGGATTTGCCCAGCTATTAATGTGTCACTGCTTCATGTTGAATATTTTGTGGCCAATTTGGTTAGAGATTTTGAATGGAAGTTGGGAGATCAAAATGAGGTTGACTTGACAGAGAAGCAAGCCTTCACCATGGTCATGAAATATCCACTTTTTACACATATTTCTCCAAGAATAAATTCACATGTACCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
p450

Protein Analysis

517

Amino Acids

59.33

Weight (kDa)

9.21

Isoelectric Point (pI)

48.1

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 933, 1352
AclWI GGATC 2 cut(s) 861, 1226
AcoI YGGCCR 2 cut(s) 972, 1410
AcsI RAATTY 6 cut(s) 584, 640, 664, 806, 1204, 1534
AcuI CTGAAG 1 cut(s) 842
AcvI CACGTG 1 cut(s) 1229
AcyI GRCGYC 1 cut(s) 385
AfaI GTAC 2 cut(s) 289, 1545
AfiI CCNNNNNNNGG 2 cut(s) 116, 872
AflIII ACRYGT 1 cut(s) 1540
AjiI CACGTC 1 cut(s) 770
AjnI CCWGG 1 cut(s) 1267
AjuI GAANNNNNNNTTGG 2 cut(s) 1519, 1551
AluBI AGCT 7 cut(s) 67, 260, 360, 862, 886, 1009, 1373
AluI AGCT 7 cut(s) 67, 260, 360, 862, 886, 1009, 1373
Alw21I GWGCWC 3 cut(s) 274, 353, 531
Alw26I GTCTC 2 cut(s) 231, 428
Alw44I GTGCAC 2 cut(s) 349, 527
AlwI GGATC 2 cut(s) 861, 1226
AlwNI CAGNNNCTG 1 cut(s) 503
Ama87I CYCGRG 1 cut(s) 431
AoxI GGCC 5 cut(s) 199, 373, 513, 972, 1410
ApaLI GTGCAC 2 cut(s) 349, 527
ApeKI GCWGC 2 cut(s) 260, 311
ApoI RAATTY 6 cut(s) 584, 640, 664, 806, 1204, 1534
AseI ATTAAT 1 cut(s) 1377
Asp700I GAANNNNTTC 2 cut(s) 825, 1534
AspLEI GCGC 1 cut(s) 58
AspS9I GGNCC 2 cut(s) 200, 374
AsuHPI GGTGA 3 cut(s) 1213, 1312, 1477
AsuII TTCGAA 1 cut(s) 697
AvaI CYCGRG 1 cut(s) 431
BaeGI GKGCMC 2 cut(s) 353, 531
BalI TGGCCA 2 cut(s) 974, 1412
BanII GRGCYC 1 cut(s) 171
BarI GAAGNNNNNNTAC 2 cut(s) 871, 903
BbrPI CACGTG 1 cut(s) 1229
BbsI GAAGAC 2 cut(s) 380, 819
Bbv12I GWGCWC 3 cut(s) 274, 353, 531
BbvI GCAGC 2 cut(s) 247, 298
BccI CCATC 5 cut(s) 450, 524, 584, 1166, 1249
BcgI CGANNNNNNTGC 2 cut(s) 407, 441
BciT130I CCWGG 1 cut(s) 1269
BcoDI GTCTC 2 cut(s) 231, 428
BfaI CTAG 2 cut(s) 147, 929
BglII AGATCT 1 cut(s) 483
BisI GCNGC 2 cut(s) 261, 312
BlsI GCNGC 2 cut(s) 262, 313
Bme1390I CCNGG 1 cut(s) 1269
BmeT110I CYCGRG 1 cut(s) 431
BmgBI CACGTC 1 cut(s) 770
BmgT120I GGNCC 2 cut(s) 200, 374
BmiI GGNNCC 1 cut(s) 937
BmrFI CCNGG 1 cut(s) 1269
BmsI GCATC 3 cut(s) 1065, 1183, 1329
BpiI GAAGAC 2 cut(s) 380, 819
Bpu10I CCTNAGC 1 cut(s) 71
Bpu14I TTCGAA 1 cut(s) 697
BsaAI YACGTR 1 cut(s) 1229
BsaHI GRCGYC 1 cut(s) 385
BsaI GGTCTC 1 cut(s) 231
BsaJI CCNNGG 3 cut(s) 1142, 1268, 1488
BsaXI ACNNNNNCTCC 3 cut(s) 26, 51, 81
Bsc4I CCNNNNNNNGG 2 cut(s) 116, 872
Bse1I ACTGG 2 cut(s) 346, 1291
Bse3DI GCAATG 1 cut(s) 1203
BseBI CCWGG 1 cut(s) 1269
BseDI CCNNGG 3 cut(s) 1142, 1268, 1488
BseGI GGATG 4 cut(s) 516, 898, 1117, 1177
BseLI CCNNNNNNNGG 2 cut(s) 116, 872
BseMI GCAATG 1 cut(s) 1203
BseNI ACTGG 2 cut(s) 346, 1291
BseRI GAGGAG 1 cut(s) 1372
BseSI GKGCMC 2 cut(s) 353, 531
BseXI GCAGC 2 cut(s) 247, 298
BseYI CCCAGC 1 cut(s) 1369
BsgI GTGCAG 1 cut(s) 348
BshFI GGCC 5 cut(s) 201, 375, 515, 974, 1412
BsiHKAI GWGCWC 3 cut(s) 274, 353, 531
BsiHKCI CYCGRG 1 cut(s) 431
BslFI GGGAC 1 cut(s) 81
BslI CCNNNNNNNGG 2 cut(s) 116, 872
BsmAI GTCTC 2 cut(s) 231, 428
BsmBI CGTCTC 1 cut(s) 428
BsmFI GGGAC 1 cut(s) 81
BsnI GGCC 5 cut(s) 201, 375, 515, 974, 1412
Bso31I GGTCTC 1 cut(s) 231
BsoBI CYCGRG 1 cut(s) 431
Bsp119I TTCGAA 1 cut(s) 697
Bsp1286I GDGCHC 4 cut(s) 171, 274, 353, 531
Bsp143I GATC 5 cut(s) 483, 687, 853, 1231, 1447
Bsp19I CCATGG 1 cut(s) 1488
BspACI CCGC 2 cut(s) 933, 1352
BspANI GGCC 5 cut(s) 201, 375, 515, 974, 1412
BspHI TCATGA 2 cut(s) 772, 1494
BspLI GGNNCC 1 cut(s) 937
BspPI GGATC 2 cut(s) 861, 1226
BspT104I TTCGAA 1 cut(s) 697
BspTNI GGTCTC 1 cut(s) 231
BsrDI GCAATG 1 cut(s) 1203
BsrI ACTGG 2 cut(s) 346, 1291
BssECI CCNNGG 3 cut(s) 1142, 1268, 1488
BssMI GATC 5 cut(s) 483, 687, 853, 1231, 1447
BssNI GRCGYC 1 cut(s) 385
BssT1I CCWWGG 1 cut(s) 1488
Bst2UI CCWGG 1 cut(s) 1269
Bst4CI ACNGT 4 cut(s) 292, 355, 872, 1213
BstACI GRCGYC 1 cut(s) 385
BstAPI GCANNNNNTGC 1 cut(s) 348
BstBAI YACGTR 1 cut(s) 1229
BstBI TTCGAA 1 cut(s) 697
BstC8I GCNNGC 2 cut(s) 620, 1479
BstDEI CTNAG 4 cut(s) 71, 115, 487, 979
BstDSI CCRYGG 2 cut(s) 1142, 1488
BstENI CCTNNNNNAGG 1 cut(s) 114
BstF5I GGATG 4 cut(s) 516, 898, 1117, 1177
BstHHI GCGC 1 cut(s) 58
BstKTI GATC 5 cut(s) 486, 690, 856, 1234, 1450
BstMAI GTCTC 2 cut(s) 231, 428
BstMBI GATC 5 cut(s) 483, 687, 853, 1231, 1447
BstMWI GCNNNNNNNGC 4 cut(s) 64, 269, 348, 357
BstNI CCWGG 1 cut(s) 1269
BstNSI RCATGY 1 cut(s) 1544
BstSCI CCNGG 1 cut(s) 1267
BstSLI GKGCMC 2 cut(s) 353, 531
BstV1I GCAGC 2 cut(s) 247, 298
BstV2I GAAGAC 2 cut(s) 380, 819
BstX2I RGATCY 2 cut(s) 483, 853
BstXI CCANNNNNNTGG 2 cut(s) 523, 1242
BstYI RGATCY 2 cut(s) 483, 853
BsuRI GGCC 5 cut(s) 201, 375, 515, 974, 1412
BtgI CCRYGG 2 cut(s) 1142, 1488
BtrI CACGTC 1 cut(s) 770
BtsCI GGATG 4 cut(s) 516, 898, 1117, 1177
BtsI GCAGTG 2 cut(s) 629, 1385
BtsIMutI CAGTG 5 cut(s) 351, 353, 629, 1218, 1385
Cac8I GCNNGC 2 cut(s) 620, 1479
CaiI CAGNNNCTG 1 cut(s) 503
CciI TCATGA 2 cut(s) 772, 1494
CfoI GCGC 1 cut(s) 58
Cfr13I GGNCC 2 cut(s) 200, 374
CseI GACGC 1 cut(s) 374
Csp6I GTAC 2 cut(s) 288, 1544
CviAII CATG 8 cut(s) 446, 521, 547, 773, 1394, 1489, 1495, 1541
CviQI GTAC 2 cut(s) 288, 1544
DdeI CTNAG 4 cut(s) 71, 115, 487, 979
DpnI GATC 5 cut(s) 485, 689, 855, 1233, 1449
DpnII GATC 5 cut(s) 483, 687, 853, 1231, 1447
DraI TTTAAA 1 cut(s) 474
EaeI YGGCCR 2 cut(s) 972, 1410
EciI GGCGGA 1 cut(s) 948
Eco130I CCWWGG 1 cut(s) 1488
Eco24I GRGCYC 1 cut(s) 171
Eco31I GGTCTC 1 cut(s) 231
Eco32I GATATC 1 cut(s) 1312
Eco57I CTGAAG 1 cut(s) 842
Eco72I CACGTG 1 cut(s) 1229
Eco88I CYCGRG 1 cut(s) 431
EcoNI CCTNNNNNAGG 1 cut(s) 114
EcoRII CCWGG 1 cut(s) 1267
EcoRV GATATC 1 cut(s) 1312
EcoT14I CCWWGG 1 cut(s) 1488
EcoT22I ATGCAT 1 cut(s) 420
EcoT38I GRGCYC 1 cut(s) 171
ErhI CCWWGG 1 cut(s) 1488
Esp3I CGTCTC 1 cut(s) 428
FaeI CATG 8 cut(s) 449, 524, 550, 776, 1397, 1492, 1498, 1544
FalI AAGNNNNNCTT 6 cut(s) 618, 650, 701, 733, 1466, 1498
FaqI GGGAC 1 cut(s) 81
FatI CATG 8 cut(s) 445, 520, 546, 772, 1393, 1488, 1494, 1540
FauI CCCGC 1 cut(s) 1345
FauNDI CATATG 1 cut(s) 370
Fnu4HI GCNGC 2 cut(s) 261, 312
FokI GGATG 4 cut(s) 503, 905, 1104, 1184
FriOI GRGCYC 1 cut(s) 171
Fsp4HI GCNGC 2 cut(s) 261, 312
FspBI CTAG 2 cut(s) 147, 929
GlaI GCGC 1 cut(s) 57
GluI GCNGC 2 cut(s) 261, 312
GsaI CCCAGC 1 cut(s) 1373
HaeIII GGCC 5 cut(s) 201, 375, 515, 974, 1412
HgaI GACGC 1 cut(s) 374
HhaI GCGC 1 cut(s) 58
Hin1I GRCGYC 1 cut(s) 385
Hin1II CATG 8 cut(s) 449, 524, 550, 776, 1397, 1492, 1498, 1544
Hin6I GCGC 1 cut(s) 56
HinP1I GCGC 1 cut(s) 56
HincII GTYRAC 2 cut(s) 1292, 1462
HindII GTYRAC 2 cut(s) 1292, 1462
HindIII AAGCTT 2 cut(s) 884, 1007
HinfI GANTC 6 cut(s) 330, 429, 500, 579, 724, 1275
HphI GGTGA 3 cut(s) 1213, 1312, 1477
Hpy166II GTNNAC 5 cut(s) 351, 529, 557, 1292, 1462
Hpy188I TCNGA 2 cut(s) 919, 1002
Hpy188III TCNNGA 6 cut(s) 317, 426, 433, 773, 1153, 1495
Hpy8I GTNNAC 5 cut(s) 351, 529, 557, 1292, 1462
Hpy99I CGWCG 2 cut(s) 732, 872
HpyAV CCTTC 3 cut(s) 703, 1081, 1492
HpyCH4III ACNGT 4 cut(s) 292, 355, 872, 1213
HpyCH4IV ACGT 3 cut(s) 437, 769, 1228
HpyCH4V TGCA 7 cut(s) 351, 365, 418, 529, 622, 1055, 1196
HpyF10VI GCNNNNNNNGC 4 cut(s) 64, 269, 348, 357
HpyF3I CTNAG 4 cut(s) 71, 115, 487, 979
HpySE526I ACGT 3 cut(s) 437, 769, 1228
Hsp92I GRCGYC 1 cut(s) 385
Hsp92II CATG 8 cut(s) 449, 524, 550, 776, 1397, 1492, 1498, 1544
HspAI GCGC 1 cut(s) 56
Kzo9I GATC 5 cut(s) 483, 687, 853, 1231, 1447
LmnI GCTCC 2 cut(s) 72, 867
LpnPI CCDG 9 cut(s) 246, 285, 321, 359, 489, 1254, 1272, 1281, 1383
Lsp1109I GCAGC 2 cut(s) 247, 298
LweI GCATC 3 cut(s) 1065, 1183, 1329
MaeI CTAG 2 cut(s) 147, 929
MaeII ACGT 3 cut(s) 437, 769, 1228
MaeIII GTNAC 3 cut(s) 208, 1224, 1383
MalI GATC 5 cut(s) 485, 689, 855, 1233, 1449
MboI GATC 5 cut(s) 483, 687, 853, 1231, 1447
MflI RGATCY 2 cut(s) 483, 853
MhlI GDGCHC 4 cut(s) 171, 274, 353, 531
MlsI TGGCCA 2 cut(s) 974, 1412
MluNI TGGCCA 2 cut(s) 974, 1412
MlyI GAGTC 2 cut(s) 423, 588
MnlI CCTC 6 cut(s) 47, 1291, 1319, 1350, 1353, 1450
Mox20I TGGCCA 2 cut(s) 974, 1412
Mph1103I ATGCAT 1 cut(s) 420
MroXI GAANNNNTTC 2 cut(s) 825, 1534
MscI TGGCCA 2 cut(s) 974, 1412
MseI TTAA 6 cut(s) 473, 603, 782, 1067, 1377, 1549
MslI CAYNNNNRTG 3 cut(s) 521, 961, 1493
Msp20I TGGCCA 2 cut(s) 974, 1412
MspR9I CCNGG 1 cut(s) 1269
MvaI CCWGG 1 cut(s) 1269
MwoI GCNNNNNNNGC 4 cut(s) 64, 269, 348, 357
NcoI CCATGG 1 cut(s) 1488
NdeI CATATG 1 cut(s) 370
NdeII GATC 5 cut(s) 483, 687, 853, 1231, 1447
NlaIII CATG 8 cut(s) 449, 524, 550, 776, 1397, 1492, 1498, 1544
NlaIV GGNNCC 1 cut(s) 937
NmuCI GTSAC 2 cut(s) 1224, 1383
NsiI ATGCAT 1 cut(s) 420
NspI RCATGY 1 cut(s) 1544
NspV TTCGAA 1 cut(s) 697
PaeR7I CTCGAG 1 cut(s) 431
PagI TCATGA 2 cut(s) 772, 1494
PciI ACATGT 1 cut(s) 1540
PdmI GAANNNNTTC 2 cut(s) 825, 1534
PfeI GAWTC 4 cut(s) 330, 500, 724, 1275
PkrI GCNGC 2 cut(s) 262, 313
PleI GAGTC 2 cut(s) 423, 587
PmaCI CACGTG 1 cut(s) 1229
PmlI CACGTG 1 cut(s) 1229
PpsI GAGTC 2 cut(s) 423, 587
Ppu21I YACGTR 1 cut(s) 1229
PscI ACATGT 1 cut(s) 1540
PshBI ATTAAT 1 cut(s) 1377
Psp6I CCWGG 1 cut(s) 1267
PspCI CACGTG 1 cut(s) 1229
PspFI CCCAGC 1 cut(s) 1369
PspGI CCWGG 1 cut(s) 1267
PspN4I GGNNCC 1 cut(s) 937
PspPI GGNCC 2 cut(s) 200, 374
PstNI CAGNNNCTG 1 cut(s) 503
PsuI RGATCY 2 cut(s) 483, 853
RsaI GTAC 2 cut(s) 289, 1545
RsaNI GTAC 2 cut(s) 288, 1544
RseI CAYNNNNRTG 3 cut(s) 521, 961, 1493
SaqAI TTAA 6 cut(s) 473, 603, 782, 1067, 1377, 1549
SatI GCNGC 2 cut(s) 261, 312
Sau3AI GATC 5 cut(s) 483, 687, 853, 1231, 1447
Sau96I GGNCC 2 cut(s) 200, 374
SchI GAGTC 2 cut(s) 423, 588
ScrFI CCNGG 1 cut(s) 1269
SduI GDGCHC 4 cut(s) 171, 274, 353, 531
SfaNI GCATC 3 cut(s) 1065, 1183, 1329
Sfr274I CTCGAG 1 cut(s) 431
SfuI TTCGAA 1 cut(s) 697
SlaI CTCGAG 1 cut(s) 431
SmiMI CAYNNNNRTG 3 cut(s) 521, 961, 1493
SmlI CTYRAG 1 cut(s) 431
SmoI CTYRAG 1 cut(s) 431
SsiI CCGC 2 cut(s) 933, 1352
SspI AATATT 1 cut(s) 1403
SspMI CTAG 2 cut(s) 147, 929
StyD4I CCNGG 1 cut(s) 1267
StyI CCWWGG 1 cut(s) 1488
TaaI ACNGT 4 cut(s) 292, 355, 872, 1213
TaiI ACGT 3 cut(s) 440, 772, 1231
TaqI TCGA 6 cut(s) 268, 318, 427, 432, 697, 947
TaqII GACCGA 1 cut(s) 1267
TfiI GAWTC 4 cut(s) 330, 500, 724, 1275
Tru1I TTAA 6 cut(s) 473, 603, 782, 1067, 1377, 1549
Tru9I TTAA 6 cut(s) 473, 603, 782, 1067, 1377, 1549
TscAI CASTG 5 cut(s) 353, 358, 636, 1218, 1392
TseFI GTSAC 2 cut(s) 1224, 1383
TseI GCWGC 2 cut(s) 260, 311
Tsp45I GTSAC 2 cut(s) 1224, 1383
TspDTI ATGAA 9 cut(s) 232, 507, 789, 912, 1032, 1123, 1267, 1382, 1511
TspGWI ACGGA 1 cut(s) 905
TspRI CASTG 5 cut(s) 353, 358, 636, 1218, 1392
VneI GTGCAC 2 cut(s) 349, 527
VspI ATTAAT 1 cut(s) 1377
XagI CCTNNNNNAGG 1 cut(s) 114
XapI RAATTY 6 cut(s) 584, 640, 664, 806, 1204, 1534
XceI RCATGY 1 cut(s) 1544
XhoI CTCGAG 1 cut(s) 431
XmnI GAANNNNTTC 2 cut(s) 825, 1534
XspI CTAG 2 cut(s) 147, 929
Zsp2I ATGCAT 1 cut(s) 420
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.