Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

N/A

Physical Location & Seq

Genomic Coordinates Reverse (-)

3851545 .. 3854799

Gene Structure 3255 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G033700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 513 bp

ATGACTGTGAATACGACCCATGACGGGCGAGAAGGACGTGAGCTGACGTTTGAGGAGTTGCAGAACACCATTGGAGGCTCAGGCAAGGACTTTGGGTCCATGAACATGGACGAGCTCTTGAAGAGCATATGGACGGCTAAAGAGACTCAGATTATGGCTCCATCTGGTGGTGGGTCTAATATGCTTCAGAGGCAACAGACCTTGGGAGAGATGACTTTGGAGGAGTTCCTGGTCAAAGCTGGGGTTGTTAGAGAAGAGGCTCAATTGGCTCCAAAGCCAGCTAATAATGGTGCTGGGTTTTTTTTTTTTTTTTTTTTTTTTCAGATTCAATTGGATATTGACTTGGGACCAAAGGTATTTGATGTTTTCAGTGTGATTGCTGTGGCGCATGGAGCTAGCTCCAGTGGGCTGCAAGTCACTGCTGCCGTACACACCTGGCTTCCCCCAAAGACAAGAACAAAAGCAGTGCTCTCTATAGCCCCAAGATTAGAACTTGGGCTTGTTGTGAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001067 GO:0001101 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006950 GO:0006970 GO:0007154 GO:0007165 GO:0008150 GO:0009414 GO:0009415 GO:0009628 GO:0009651 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009787 GO:0009789 GO:0009889 GO:0009966 GO:0009967 GO:0009987 GO:0010033 GO:0010035 GO:0010468 GO:0010556 GO:0010646 GO:0010647 GO:0019219 GO:0019222 GO:0023051 GO:0023052 GO:0023056 GO:0031323 GO:0031326 GO:0032870 GO:0033993 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044424 GO:0044464 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051716 GO:0060255 GO:0065007 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0080090 GO:0097159 GO:0097305 GO:0097306 GO:0140110 GO:1901363 GO:1901419 GO:1901421 GO:1901700 GO:1901701 GO:1903506 GO:1905957 GO:1905959 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

bZIP_1

Protein Analysis

171

Amino Acids

18.53

Weight (kDa)

5.61

Isoelectric Point (pI)

27.62

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	167
AcuI	CTGAAG	1 cut(s)	170
AfaI	GTAC	1 cut(s)	429
AfiI	CCNNNNNNNGG	2 cut(s)	24, 167
AgsI	TTSAA	2 cut(s)	121, 329
AhdI	GACNNNNNGTC	1 cut(s)	94
AjiI	CACGTC	1 cut(s)	38
AjnI	CCWGG	2 cut(s)	228, 434
AluBI	AGCT	6 cut(s)	43, 115, 239, 281, 395, 399
AluI	AGCT	6 cut(s)	43, 115, 239, 281, 395, 399
Alw21I	GWGCWC	2 cut(s)	117, 471
Alw26I	GTCTC	1 cut(s)	137
ApeKI	GCWGC	2 cut(s)	409, 422
AspLEI	GCGC	1 cut(s)	388
AspS9I	GGNCC	2 cut(s)	96, 347
AsuNHI	GCTAGC	1 cut(s)	395
AvaII	GGWCC	2 cut(s)	96, 347
BanII	GRGCYC	1 cut(s)	117
Bbv12I	GWGCWC	2 cut(s)	117, 471
BbvI	GCAGC	2 cut(s)	396, 409
BccI	CCATC	1 cut(s)	169
BceAI	ACGGC	2 cut(s)	150, 410
BciT130I	CCWGG	2 cut(s)	230, 436
BcoDI	GTCTC	1 cut(s)	137
BfaI	CTAG	1 cut(s)	396
BfmI	CTRYAG	1 cut(s)	474
BisI	GCNGC	2 cut(s)	410, 423
BlsI	GCNGC	2 cut(s)	411, 424
Bme1390I	CCNGG	2 cut(s)	230, 436
Bme18I	GGWCC	2 cut(s)	96, 347
BmeRI	GACNNNNNGTC	1 cut(s)	94
BmgBI	CACGTC	1 cut(s)	38
BmgT120I	GGNCC	2 cut(s)	96, 347
BmiI	GGNNCC	4 cut(s)	97, 159, 270, 348
BmrFI	CCNGG	2 cut(s)	230, 436
BmtI	GCTAGC	1 cut(s)	399
BpmI	CTGGAG	1 cut(s)	385
Bpu10I	CCTNAGC	1 cut(s)	79
BsaJI	CCNNGG	1 cut(s)	201
Bsc4I	CCNNNNNNNGG	2 cut(s)	24, 167
Bse1I	ACTGG	1 cut(s)	402
BseBI	CCWGG	2 cut(s)	230, 436
BseDI	CCNNGG	1 cut(s)	201
BseLI	CCNNNNNNNGG	2 cut(s)	24, 167
BseMII	CTCAG	2 cut(s)	93, 161
BseNI	ACTGG	1 cut(s)	402
BseRI	GAGGAG	2 cut(s)	68, 236
BseXI	GCAGC	2 cut(s)	396, 409
BseYI	CCCAGC	2 cut(s)	239, 293
BsiHKAI	GWGCWC	2 cut(s)	117, 471
BslFI	GGGAC	1 cut(s)	360
BslI	CCNNNNNNNGG	2 cut(s)	24, 167
BsmAI	GTCTC	1 cut(s)	137
BsmFI	GGGAC	1 cut(s)	360
Bsp1286I	GDGCHC	2 cut(s)	117, 471
BspCNI	CTCAG	2 cut(s)	92, 160
BspLI	GGNNCC	4 cut(s)	97, 159, 270, 348
BspOI	GCTAGC	1 cut(s)	399
BspQI	GCTCTTC	1 cut(s)	116
BsrI	ACTGG	1 cut(s)	402
BssECI	CCNNGG	1 cut(s)	201
BssT1I	CCWWGG	1 cut(s)	201
Bst2UI	CCWGG	2 cut(s)	230, 436
Bst4CI	ACNGT	1 cut(s)	7
Bst6I	CTCTTC	2 cut(s)	116, 249
BstC8I	GCNNGC	2 cut(s)	279, 397
BstDEI	CTNAG	2 cut(s)	79, 147
BstHHI	GCGC	1 cut(s)	388
BstMAI	GTCTC	1 cut(s)	137
BstMWI	GCNNNNNNNGC	3 cut(s)	190, 266, 392
BstNI	CCWGG	2 cut(s)	230, 436
BstSCI	CCNGG	2 cut(s)	228, 434
BstSFI	CTRYAG	1 cut(s)	474
BstV1I	GCAGC	2 cut(s)	396, 409
BstXI	CCANNNNNNTGG	1 cut(s)	106
BtrI	CACGTC	1 cut(s)	38
BtsI	GCAGTG	2 cut(s)	417, 471
BtsIMutI	CAGTG	4 cut(s)	376, 409, 417, 471
Cac8I	GCNNGC	2 cut(s)	279, 397
CfoI	GCGC	1 cut(s)	388
Cfr13I	GGNCC	2 cut(s)	96, 347
Csp6I	GTAC	1 cut(s)	428
CviAII	CATG	4 cut(s)	20, 100, 106, 389
CviQI	GTAC	1 cut(s)	428
DdeI	CTNAG	2 cut(s)	79, 147
DriI	GACNNNNNGTC	1 cut(s)	94
Eam1104I	CTCTTC	2 cut(s)	116, 249
Eam1105I	GACNNNNNGTC	1 cut(s)	94
EarI	CTCTTC	2 cut(s)	116, 249
Ecl136II	GAGCTC	1 cut(s)	115
Eco130I	CCWWGG	1 cut(s)	201
Eco24I	GRGCYC	1 cut(s)	117
Eco47I	GGWCC	2 cut(s)	96, 347
Eco53kI	GAGCTC	1 cut(s)	115
Eco57I	CTGAAG	1 cut(s)	170
EcoICRI	GAGCTC	1 cut(s)	115
EcoRII	CCWGG	2 cut(s)	228, 434
EcoT14I	CCWWGG	1 cut(s)	201
EcoT38I	GRGCYC	1 cut(s)	117
ErhI	CCWWGG	1 cut(s)	201
FaeI	CATG	4 cut(s)	23, 103, 109, 392
FaiI	YATR	9 cut(s)	21, 101, 107, 128, 130, 155, 182, 390, 476
FaqI	GGGAC	1 cut(s)	360
FatI	CATG	4 cut(s)	19, 99, 105, 388
FauNDI	CATATG	1 cut(s)	128
Fnu4HI	GCNGC	2 cut(s)	410, 423
FriOI	GRGCYC	1 cut(s)	117
Fsp4HI	GCNGC	2 cut(s)	410, 423
FspBI	CTAG	1 cut(s)	396
GlaI	GCGC	1 cut(s)	387
GluI	GCNGC	2 cut(s)	410, 423
GsaI	CCCAGC	2 cut(s)	243, 297
GsuI	CTGGAG	1 cut(s)	385
HhaI	GCGC	1 cut(s)	388
Hin1II	CATG	4 cut(s)	23, 103, 109, 392
Hin6I	GCGC	1 cut(s)	386
HinP1I	GCGC	1 cut(s)	386
HinfI	GANTC	2 cut(s)	145, 325
Hpy166II	GTNNAC	1 cut(s)	430
Hpy188I	TCNGA	3 cut(s)	150, 189, 324
Hpy188III	TCNNGA	1 cut(s)	118
Hpy8I	GTNNAC	1 cut(s)	430
HpyAV	CCTTC	1 cut(s)	26
HpyCH4III	ACNGT	1 cut(s)	7
HpyCH4IV	ACGT	2 cut(s)	37, 47
HpyCH4V	TGCA	2 cut(s)	61, 412
HpyF10VI	GCNNNNNNNGC	3 cut(s)	190, 266, 392
HpyF3I	CTNAG	2 cut(s)	79, 147
HpySE526I	ACGT	2 cut(s)	37, 47
Hsp92II	CATG	4 cut(s)	23, 103, 109, 392
HspAI	GCGC	1 cut(s)	386
LguI	GCTCTTC	1 cut(s)	116
LmnI	GCTCC	4 cut(s)	163, 274, 392, 404
Lsp1109I	GCAGC	2 cut(s)	396, 409
MaeI	CTAG	1 cut(s)	396
MaeII	ACGT	2 cut(s)	37, 47
MaeIII	GTNAC	1 cut(s)	415
MboII	GAAGA	2 cut(s)	133, 266
MfeI	CAATTG	2 cut(s)	263, 329
MhlI	GDGCHC	2 cut(s)	117, 471
MluCI	AATT	2 cut(s)	263, 329
MlyI	GAGTC	1 cut(s)	139
MnlI	CCTC	5 cut(s)	46, 68, 183, 214, 250
MslI	CAYNNNNRTG	1 cut(s)	104
MspR9I	CCNGG	2 cut(s)	230, 436
MunI	CAATTG	2 cut(s)	263, 329
MvaI	CCWGG	2 cut(s)	230, 436
MwoI	GCNNNNNNNGC	3 cut(s)	190, 266, 392
NdeI	CATATG	1 cut(s)	128
NheI	GCTAGC	1 cut(s)	395
NlaIII	CATG	4 cut(s)	23, 103, 109, 392
NlaIV	GGNNCC	4 cut(s)	97, 159, 270, 348
NmuCI	GTSAC	1 cut(s)	415
PciSI	GCTCTTC	1 cut(s)	116
PfeI	GAWTC	1 cut(s)	325
PflMI	CCANNNNNTGG	1 cut(s)	167
PkrI	GCNGC	2 cut(s)	411, 424
PleI	GAGTC	1 cut(s)	139
PpsI	GAGTC	1 cut(s)	139
Psp124BI	GAGCTC	1 cut(s)	117
Psp6I	CCWGG	2 cut(s)	228, 434
PspFI	CCCAGC	2 cut(s)	239, 293
PspGI	CCWGG	2 cut(s)	228, 434
PspN4I	GGNNCC	4 cut(s)	97, 159, 270, 348
PspPI	GGNCC	2 cut(s)	96, 347
RsaI	GTAC	1 cut(s)	429
RsaNI	GTAC	1 cut(s)	428
RseI	CAYNNNNRTG	1 cut(s)	104
SacI	GAGCTC	1 cut(s)	117
SapI	GCTCTTC	1 cut(s)	116
SatI	GCNGC	2 cut(s)	410, 423
Sau96I	GGNCC	2 cut(s)	96, 347
SchI	GAGTC	1 cut(s)	139
ScrFI	CCNGG	2 cut(s)	230, 436
SduI	GDGCHC	2 cut(s)	117, 471
SfcI	CTRYAG	1 cut(s)	474
SinI	GGWCC	2 cut(s)	96, 347
SmiMI	CAYNNNNRTG	1 cut(s)	104
Sse9I	AATT	2 cut(s)	263, 329
SspMI	CTAG	1 cut(s)	396
SstI	GAGCTC	1 cut(s)	117
StyD4I	CCNGG	2 cut(s)	228, 434
StyI	CCWWGG	1 cut(s)	201
TaaI	ACNGT	1 cut(s)	7
TaiI	ACGT	2 cut(s)	40, 50
TasI	AATT	2 cut(s)	263, 329
TfiI	GAWTC	1 cut(s)	325
TscAI	CASTG	4 cut(s)	376, 409, 424, 471
TseFI	GTSAC	1 cut(s)	415
TseI	GCWGC	2 cut(s)	409, 422
Tsp45I	GTSAC	1 cut(s)	415
TspDTI	ATGAA	1 cut(s)	116
TspRI	CASTG	4 cut(s)	376, 409, 424, 471
Van91I	CCANNNNNTGG	1 cut(s)	167
VpaK11BI	GGWCC	2 cut(s)	96, 347
XspI	CTAG	1 cut(s)	396

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.