Prupe.5G112900_v2.0.a1

ABC transporter C family member 10-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
Physical Location & Seq
Reverse (-)
11656769 .. 11662638
5870 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G112900.2_v2.0.a1.CDS.1

Sequence Viewer

Length: 4179 bp
ATGGGAGAGGGTTTCTGGACCTTATTCTGCAGTAATGAATGCTGTTCCGGCTTTTCAGCCATTATCAATCCAGATTCATGTGTCAACAATATTTTGGTCATTGCAGCTGATATCTTGCTCCTATTAATTTTGTTATGTATCTTCATATCTAGAAGATCATCAACAAATATCATTGCACAATCACAGTCTCACACCTTTTCAACACTCTCAATCATCTCAGTTACTAGCAACGTTGGTCTGGCTTTGGTCTACTTGGGGTTTGGGATATGGACAATCATTGAGAAAGTAAATGCAGATCAGACTGTTTTACCTCTACAAGGATGGCTAGTATTATTTTTTCAAGGGTTCACATGGTTGCTTCTGGGTTTAACCATAAGCCTAAAGAAGCCACAACCTCAACATATCGCGAGAACAAAATCTTGTTCAATTCTTGCATTCTTGATTGCCATTTTTCTTTGCACTTCATCAATTTGGGAAGCTATTGTAGATGAGGCAGTATCGGTCAAGATTGTTTTAAACATTTGTTATTTCCCTGGATCAATCCTTTTGCTCTTTAGTGCATTTCAGGGAAACAATTATGCAAAAGGTGATCCAGAAACCCATGAAGATGCTTTCTACACACCTTTGCAAGGCGCAGCATCTGATATGGAAGATGAAACCAGCTTAAATGAAAATGTAACTCCTTTTGAAAAAGCAGGGTTATTTAGCACAATGTCATTTTGGTGGTTGAATCCATTAATGAAGAAAGGTAAGCAGAAGCTTCTTGAGAATGAAGATATTCCACTTTTGAGACAGGCTGATCGAGCTCGAACATGGTACTTAATATTTATGGAGCAATTGAACAAAAGGAAGGAAGAAGGTTCATCTGCTACCTCTTCTATCTTGTCCATAATATTTTATTGCCAGAGGAGAGCAATTCTTATTTCTGGGTTATACGCACTGATCAAGGTTCTCACAACTACAAGCAGTCCACTGTTTCTCATGGCCTTCATTAAGATTGCTGAAGGCAATGAAGCTTTTAAATATGAGGGTTATGCACTGACTCTTGGTCTCTTCCTAGCGAAAATCTTGGAGTCACTATCGGAGAGGCAATGGTACTTCAAAACTAGACTGATCGGGCTCCAAGTGAGATCATTGGTGTCAGCAGCAATATATCAGAAGCAACTGCGACTCTCGAATTCTGCCAAGATGGCTCATTCTCCTGGTGAGATAGTGAATTATGTAACAGTGGATGCTTACAGAATTGGTGAATTTCCATACTGGTTTCATCAGATGTGGACCTCAAGCCTTCAACTATGCCTTTCATTACTTATTTTTTACTTCTCCGTGGGGCTGGCAACTATTGCAGCTCTAACTGTACTCTTATTGACTGTGCTGGCAAGCTCCCCACTGGCCAAGTTGCAGCATGAGTACCAGACCAAGTTCATGGTAGCACAAGATAGGAGGCTGAAGGCAATTACAGAAGCACTTTCAAATATGAAGATCTTGAAGCTGTATTCTTGGGAGACAAATTTCAAAAATGTCATAGAAGAATTAAGAACAGAAGAAATTAAATGGATATCTCAACTATTGACACAAAAGGGTTATTATATTGTTATGTTCTGGTCATCTCCTATTCTTGCAGCAGCTGTTACTTTTTGGACATGCTACTTCCTTGGATTTACACTGTCTGCTAGTAATGTTTTCCCATTTTTAGCAACTTTGCGTATTGTTCAGGAGCCAATCAGGCTGATCCCAGATGTTTTTGGAGCATATGTTGAAGCAAAGGTTTCACTATCTCGAATTGTGAAGTTTCTTGATGCACCAGAGTTGGAAAATAGACATACAAGGAAAGAGAGCTGTGACAAAGAGGTTGAGCATTCCATTTTCTTTAGCTCATCCGAAATTTCATGGGATACTAATGCTACAAAGGCCACACTAAGGAACATTAATTTGGTGGTTAAACCAGGAGAAAAAGTAGCAATTTGTGGTGAGGTTGGCTCGGGTAAATCAACCCTTTTAGCTGCAATTCTTGGAGAAGTTCCACGCATCAATGGCATTGAAAATATTATGTTTGGTTCTGCCATGGATCGTGCTAGATACCAAGAAACACTGGAGAAGTGCTCTTTAGTGAAGGACCTTGAAATTCTTCCATTCCACGATCTCACTCAGATAGGGGAAAGAGGTGTCAATCTAAGTGGTGGTCAGAAGCAGCGCATTCAACTTGCACGTGCACTTTATCAAAATGCTGATGTCTACCTCTTGGATGACCCATTCAGTGCAGTGGATGCCCATACGGCAACCAGCCTATTCAATGAATATGTCATGGGAGCTCTTGCAGAGAAGACAGTATTGCTTGTGACACACCAAGTTGATTTCCTTCCTGCTTTAAATTCAATTTTGTTGATGCATTCAGGGAAAATTCTAAGAGCAGCTCCCTACGAAGAGTTGCGGGCTTCTTGTCAAGAGTTCCAAAACCTTGTCAATACACATGATGACACCGCATATTCTGAGGGGCAAGTTGATTATGCTTCTATTGGAAGACATAAATCATCCAACAAGGAGATTGAGAAAGTAAACACTGAAGTACAGCTAAAAGAGTCTTCCAGAGATCAATTGATTAAGCTAGAAGTGAGAGAAACAGGAGACACTGGTTTCAAGCCATACATTCAGTACTTGAAGCACAGGAAAGGGTTTTGGCACTTCTCTTTTCTAGTCTTTTTCTTCTCGGTATTCGTAGCTGGGCAATTAAGTCAATTTTATTGGTTGGCTTTGAAACTTCAGGATTATAGCTTATCCAGAGTCAAACTCTTGGTCGTTTATTCTGTGATCATGTGTATCATGGTATTCGCTTTGCTTATGCGATCCTTTTCTGTAGTTGATTTAGGATGTGGGGCATCCACATCCATTTTTTCTACACTATTAAACTCTCTTTTCCGAGCACCAATGCTGTTTTATGACTCAACACCCATGGGAAGGATACTTAGTCGGGTATCTTCTGATATGAATATCATTGACCTTGAAGTAGCTTTCAAGTTGATGATAGCTGTTGCGGGAACTCTGAACACATACAGCATATTTATAGCATTGGTTTTTCAAACTTGGCCAATGGTGTTTCTGATTATACCCACAATTTATATTACTGTACTTCTTCAGAAATACTACTTTGCTTCTGCAAAAGAGTTGATGCGAATGAATGGCACAACTATGTCCGCACTAGCAAGCCACCTTTCCGAATCTATTGGTGGAGCCATGACAATCAGAGCTTTCGGAGAGGAGGATCAGTTCTTCTCAAAATACTTAGACTCTATTGATATAAATGCTAGTGCTGACTTCAATAGATTTTCAGCTAGTGAGTGGTTGATAGAACGTCTTGAATGGCTATGTGCTATTGTTCTCTCAGCCTCAGCACTTGCCATCACTTTGATTCAGTTTGACGCTTCTTCCTCTGGTTTTATTGGGATGACACTGTCATATGGTCTCTCATTAAATGTATTTCTAGTAATTTCTGACCAATTTCAATGCATGCTAGAAAATTCAATGATTTCTGTAGAAAGAGCAGAGCAATACATGCACATTTCCCATGAGGCTCCAGAAGTAATAGAAGAAAACAGACCTGCCGACAATTGGCCTACTGCTGGTAAAATGGAAATACATGATTTAAAGGTAAGATATAGGCCAAATGCTCCACTAGTTCTTCGTGGGATAAATTGCATAATTGAAGGAGGGTACAAAATTGGGATTGTTGGCCGGACTGGAAGTGGAAAGACTACTCTTATCAGCGTTTTGTTCCGTCTGGTAGAGCCTACAGAGGGAAGGATTATAGTAGATGACTATGACATTTGTAAAATTGGACTTCATGATTTAAGATCACGTTTTGGGATCATCCCACAAGATCCAACACTATTCAATGGGTCTGTCAGATTCAATCTAGACCCCTTATCAGAGCACACTGATCATGAAATATGGGAGGTTCTTGAAAAATGTCAGTTACGAGAGGCCATTCAAGAAAAAGAAGGCGGCCTGGATTCTTTAGGTAATAAACTGTCTCTAGGAGTGTTTTTCAGTGTCTGTCAAACAAGAACTAACAACCTGGATTACAGTTGTACAAGATGGAACAAACTGGAGCATGGGACAGCGACAACTATTTTGTTTGGGACGCGCTTTGTTGAAGAGGAGCCGGATACTAGTGCTCGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

1393

Amino Acids

156.69

Weight (kDa)

5.93

Isoelectric Point (pI)

36.87

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0029063)

Species Orthologous Gene IDs
prunus_persica Prupe.5G112900_v2.0.a1 Prupe.5G112900_v2.0.a1

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 3604
AccI GTMKAC 2 cut(s) 249, 2235
AccII CGCG 2 cut(s) 407, 4141
AciI CCGC 5 cut(s) 2431, 2481, 3032, 3192, 3999
AclI AACGTT 1 cut(s) 231
AclWI GGATC 8 cut(s) 544, 584, 1726, 2076, 2838, 3267, 3869, 3869
AcoI YGGCCR 3 cut(s) 1392, 3083, 3727
AcsI RAATTY 8 cut(s) 1177, 1250, 1510, 1884, 2124, 2371, 2400, 3514
AcuI CTGAAG 5 cut(s) 1023, 1469, 2583, 2744, 3116
AcvI CACGTG 1 cut(s) 2210
AfaI GTAC 9 cut(s) 818, 1097, 1359, 1412, 2568, 2654, 3126, 3710, 4087
AfiI CCNNNNNNNGG 7 cut(s) 317, 629, 1920, 2955, 3606, 3617, 3791
AhdI GACNNNNNGTC 1 cut(s) 1047
AhlI ACTAGT 2 cut(s) 3670, 4166
AjnI CCWGG 5 cut(s) 532, 1201, 1945, 4002, 4071
AjuI GAANNNNNNNTTGG 2 cut(s) 1916, 1948
AloI GAACNNNNNNTCC 2 cut(s) 3248, 3280
Alw21I GWGCWC 7 cut(s) 808, 2105, 2215, 2314, 2923, 3930, 4174
Alw26I GTCTC 7 cut(s) 192, 784, 1055, 1499, 2619, 3464, 4032
Alw44I GTGCAC 1 cut(s) 2211
AlwI GGATC 8 cut(s) 544, 584, 1726, 2076, 2838, 3267, 3869, 3869
AlwNI CAGNNNCTG 3 cut(s) 641, 1628, 4050
Ama87I CYCGRG 1 cut(s) 1981
AoxI GGCC 9 cut(s) 984, 1392, 1911, 3083, 3608, 3656, 3727, 3978, 4000
ApaLI GTGCAC 1 cut(s) 2211
ApoI RAATTY 8 cut(s) 1177, 1250, 1510, 1884, 2124, 2371, 2400, 3514
ArsI GACNNNNNNTTYG 4 cut(s) 2778, 2810, 4111, 4143
AseI ATTAAT 3 cut(s) 125, 737, 1929
Asp700I GAANNNNTTC 2 cut(s) 777, 2127
AspLEI GCGC 3 cut(s) 635, 2196, 4143
AspS9I GGNCC 3 cut(s) 18, 1278, 2116
AsuHPI GGTGA 4 cut(s) 599, 1217, 1259, 1982
AvaI CYCGRG 1 cut(s) 1981
AvaII GGWCC 3 cut(s) 18, 1278, 2116
BaeGI GKGCMC 1 cut(s) 2215
BalI TGGCCA 2 cut(s) 1394, 3085
BanII GRGCYC 3 cut(s) 808, 1122, 2314
BbrPI CACGTG 1 cut(s) 2210
BbsI GAAGAC 3 cut(s) 2330, 2527, 2574
Bbv12I GWGCWC 7 cut(s) 808, 2105, 2215, 2314, 2923, 3930, 4174
BbvCI CCTCAGC 1 cut(s) 3385
BccI CCATC 4 cut(s) 315, 1183, 3404, 4086
BceAI ACGGC 1 cut(s) 2292
BciT130I CCWGG 5 cut(s) 534, 1203, 1947, 4004, 4073
BciVI GTATCC 3 cut(s) 1888, 2952, 4156
BclI TGATCA 3 cut(s) 942, 2808, 3934
BcoDI GTCTC 7 cut(s) 192, 784, 1055, 1499, 2619, 3464, 4032
BcuI ACTAGT 2 cut(s) 3670, 4166
BfmI CTRYAG 4 cut(s) 28, 2853, 3528, 3786
BfuAI ACCTGC 1 cut(s) 3604
BfuI GTATCC 3 cut(s) 1888, 2952, 4156
BglI GCCNNNNNGGC 3 cut(s) 1190, 1726, 2276
BglII AGATCT 1 cut(s) 1482
BmcAI AGTACT 1 cut(s) 2654
Bme1390I CCNGG 5 cut(s) 534, 1203, 1947, 4004, 4073
Bme18I GGWCC 3 cut(s) 18, 1278, 2116
BmeRI GACNNNNNGTC 1 cut(s) 1047
BmeT110I CYCGRG 1 cut(s) 1981
BmgT120I GGNCC 3 cut(s) 18, 1278, 2116
BmiI GGNNCC 5 cut(s) 1121, 1719, 3229, 3570, 4158
BmrFI CCNGG 5 cut(s) 534, 1203, 1947, 4004, 4073
BmsI GCATC 9 cut(s) 598, 647, 1222, 1789, 2037, 2257, 2376, 2885, 3156
BpiI GAAGAC 3 cut(s) 2330, 2527, 2574
BplI GAGNNNNNCTC 6 cut(s) 1964, 1996, 2087, 2119, 2772, 2804
BpmI CTGGAG 3 cut(s) 2114, 3555, 4124
Bpu10I CCTNAGC 1 cut(s) 3385
BpuEI CTTGAG 2 cut(s) 785, 1267
BsaAI YACGTR 1 cut(s) 2210
BsaI GGTCTC 2 cut(s) 1055, 3464
BsaJI CCNNGG 5 cut(s) 532, 1326, 1654, 2064, 2949
BsaXI ACNNNNNCTCC 6 cut(s) 1740, 1770, 1941, 1971, 3248, 3278
Bsc4I CCNNNNNNNGG 7 cut(s) 317, 629, 1920, 2955, 3606, 3617, 3791
Bse1I ACTGG 6 cut(s) 1265, 1395, 2097, 2635, 3739, 4107
Bse3DI GCAATG 4 cut(s) 99, 171, 1015, 1097
BseBI CCWGG 5 cut(s) 534, 1203, 1947, 4004, 4073
BseDI CCNNGG 5 cut(s) 532, 1326, 1654, 2064, 2949
BseLI CCNNNNNNNGG 7 cut(s) 317, 629, 1920, 2955, 3606, 3617, 3791
BseMI GCAATG 4 cut(s) 99, 171, 1015, 1097
BseMII CTCAG 5 cut(s) 231, 2162, 2481, 3393, 3399
BseNI ACTGG 6 cut(s) 1265, 1395, 2097, 2635, 3739, 4107
BseRI GAGGAG 3 cut(s) 922, 3269, 4169
BseSI GKGCMC 1 cut(s) 2215
BseYI CCCAGC 1 cut(s) 2720
BsgI GTGCAG 1 cut(s) 2280
Bsh1236I CGCG 2 cut(s) 407, 4141
BshFI GGCC 9 cut(s) 986, 1394, 1913, 3085, 3610, 3658, 3729, 3980, 4002
BsiHKAI GWGCWC 7 cut(s) 808, 2105, 2215, 2314, 2923, 3930, 4174
BsiHKCI CYCGRG 1 cut(s) 1981
BsiSI CCGG 3 cut(s) 48, 3730, 4160
BslFI GGGAC 2 cut(s) 4126, 4150
BslI CCNNNNNNNGG 7 cut(s) 317, 629, 1920, 2955, 3606, 3617, 3791
BsmAI GTCTC 7 cut(s) 192, 784, 1055, 1499, 2619, 3464, 4032
BsmFI GGGAC 2 cut(s) 4126, 4150
BsmI GAATGC 5 cut(s) 44, 434, 1858, 2196, 2389
BsnI GGCC 9 cut(s) 986, 1394, 1913, 3085, 3610, 3658, 3729, 3980, 4002
Bso31I GGTCTC 2 cut(s) 1055, 3464
BsoBI CYCGRG 1 cut(s) 1981
Bsp1286I GDGCHC 8 cut(s) 808, 1122, 2105, 2215, 2314, 2923, 3930, 4174
Bsp1407I TGTACA 1 cut(s) 4085
Bsp19I CCATGG 2 cut(s) 2064, 2949
Bsp68I TCGCGA 1 cut(s) 407
BspACI CCGC 5 cut(s) 2431, 2481, 3032, 3192, 3999
BspANI GGCC 9 cut(s) 986, 1394, 1913, 3085, 3610, 3658, 3729, 3980, 4002
BspCNI CTCAG 5 cut(s) 230, 2161, 2482, 3392, 3398
BspFNI CGCG 2 cut(s) 407, 4141
BspHI TCATGA 2 cut(s) 3838, 3937
BspLI GGNNCC 5 cut(s) 1121, 1719, 3229, 3570, 4158
BspMAI CTGCAG 1 cut(s) 32
BspMI ACCTGC 1 cut(s) 3604
BspPI GGATC 8 cut(s) 544, 584, 1726, 2076, 2838, 3267, 3869, 3869
BspTNI GGTCTC 2 cut(s) 1055, 3464
BsrDI GCAATG 4 cut(s) 99, 171, 1015, 1097
BsrGI TGTACA 1 cut(s) 4085
BsrI ACTGG 6 cut(s) 1265, 1395, 2097, 2635, 3739, 4107
BssECI CCNNGG 5 cut(s) 532, 1326, 1654, 2064, 2949
BssT1I CCWWGG 3 cut(s) 1654, 2064, 2949
Bst2UI CCWGG 5 cut(s) 534, 1203, 1947, 4004, 4073
Bst6I CTCTTC 4 cut(s) 880, 1058, 2418, 4146
BstAPI GCANNNNNTGC 3 cut(s) 1343, 2267, 3550
BstAUI TGTACA 1 cut(s) 4085
BstBAI YACGTR 1 cut(s) 2210
BstC8I GCNNGC 6 cut(s) 1335, 1377, 1381, 2433, 3202, 3506
BstDSI CCRYGG 3 cut(s) 1326, 2064, 2949
BstENI CCTNNNNNAGG 2 cut(s) 315, 627
BstFNI CGCG 2 cut(s) 407, 4141
BstHHI GCGC 3 cut(s) 635, 2196, 4143
BstMAI GTCTC 7 cut(s) 192, 784, 1055, 1499, 2619, 3464, 4032
BstNI CCWGG 5 cut(s) 534, 1203, 1947, 4004, 4073
BstNSI RCATGY 3 cut(s) 1647, 3508, 3553
BstSCI CCNGG 5 cut(s) 532, 1201, 1945, 4002, 4071
BstSFI CTRYAG 4 cut(s) 28, 2853, 3528, 3786
BstSLI GKGCMC 1 cut(s) 2215
BstUI CGCG 2 cut(s) 407, 4141
BstV2I GAAGAC 3 cut(s) 2330, 2527, 2574
BstX2I RGATCY 2 cut(s) 1482, 3874
BstXI CCANNNNNNTGG 1 cut(s) 1426
BstYI RGATCY 2 cut(s) 1482, 3874
BsuI GTATCC 3 cut(s) 1888, 2952, 4156
BsuRI GGCC 9 cut(s) 986, 1394, 1913, 3085, 3610, 3658, 3729, 3980, 4002
BtgI CCRYGG 3 cut(s) 1326, 2064, 2949
BtsI GCAGTG 1 cut(s) 2268
BtuMI TCGCGA 1 cut(s) 407
BveI ACCTGC 1 cut(s) 3604
Cac8I GCNNGC 6 cut(s) 1335, 1377, 1381, 2433, 3202, 3506
CaiI CAGNNNCTG 3 cut(s) 641, 1628, 4050
CciI TCATGA 2 cut(s) 3838, 3937
CfoI GCGC 3 cut(s) 635, 2196, 4143
Cfr13I GGNCC 3 cut(s) 18, 1278, 2116
CseI GACGC 2 cut(s) 3425, 4147
Csp6I GTAC 9 cut(s) 817, 1096, 1358, 1411, 2567, 2653, 3125, 3709, 4086
CspCI CAANNNNNGTGG 2 cut(s) 2158, 2193
CviQI GTAC 9 cut(s) 817, 1096, 1358, 1411, 2567, 2653, 3125, 3709, 4086
DraI TTTAAA 4 cut(s) 516, 1021, 2370, 3642
DriI GACNNNNNGTC 1 cut(s) 1047
EaeI YGGCCR 3 cut(s) 1392, 3083, 3727
Eam1104I CTCTTC 4 cut(s) 880, 1058, 2418, 4146
Eam1105I GACNNNNNGTC 1 cut(s) 1047
EarI CTCTTC 4 cut(s) 880, 1058, 2418, 4146
Ecl136II GAGCTC 2 cut(s) 806, 2312
Eco130I CCWWGG 3 cut(s) 1654, 2064, 2949
Eco24I GRGCYC 3 cut(s) 808, 1122, 2314
Eco31I GGTCTC 2 cut(s) 1055, 3464
Eco32I GATATC 2 cut(s) 112, 1560
Eco47I GGWCC 3 cut(s) 18, 1278, 2116
Eco53kI GAGCTC 2 cut(s) 806, 2312
Eco57I CTGAAG 5 cut(s) 1023, 1469, 2583, 2744, 3116
Eco72I CACGTG 1 cut(s) 2210
Eco88I CYCGRG 1 cut(s) 1981
EcoICRI GAGCTC 2 cut(s) 806, 2312
EcoNI CCTNNNNNAGG 2 cut(s) 315, 627
EcoO109I RGGNCCY 1 cut(s) 2116
EcoRI GAATTC 1 cut(s) 1177
EcoRII CCWGG 5 cut(s) 532, 1201, 1945, 4002, 4071
EcoRV GATATC 2 cut(s) 112, 1560
EcoT14I CCWWGG 3 cut(s) 1654, 2064, 2949
EcoT22I ATGCAT 2 cut(s) 2391, 3506
EcoT38I GRGCYC 3 cut(s) 808, 1122, 2314
ErhI CCWWGG 3 cut(s) 1654, 2064, 2949
FaqI GGGAC 2 cut(s) 4126, 4150
FauI CCCGC 2 cut(s) 2424, 3025
FauNDI CATATG 2 cut(s) 1753, 3454
FbaI TGATCA 3 cut(s) 942, 2808, 3934
FblI GTMKAC 2 cut(s) 249, 2235
FriOI GRGCYC 3 cut(s) 808, 1122, 2314
GlaI GCGC 3 cut(s) 634, 2195, 4142
GsaI CCCAGC 1 cut(s) 2724
GsuI CTGGAG 3 cut(s) 2114, 3555, 4124
HaeIII GGCC 9 cut(s) 986, 1394, 1913, 3085, 3610, 3658, 3729, 3980, 4002
HapII CCGG 3 cut(s) 48, 3730, 4160
HgaI GACGC 2 cut(s) 3425, 4147
HhaI GCGC 3 cut(s) 635, 2196, 4143
Hin6I GCGC 3 cut(s) 633, 2194, 4141
HinP1I GCGC 3 cut(s) 633, 2194, 4141
HincII GTYRAC 1 cut(s) 85
HindII GTYRAC 1 cut(s) 85
HindIII AAGCTT 2 cut(s) 758, 1014
HpaII CCGG 3 cut(s) 48, 3730, 4160
HphI GGTGA 4 cut(s) 599, 1217, 1259, 1982
Hpy166II GTNNAC 8 cut(s) 85, 250, 348, 971, 1278, 2213, 2236, 2557
Hpy8I GTNNAC 8 cut(s) 85, 250, 348, 971, 1278, 2213, 2236, 2557
HpyCH4IV ACGT 4 cut(s) 231, 2209, 3349, 3853
HpySE526I ACGT 4 cut(s) 231, 2209, 3349, 3853
HspAI GCGC 3 cut(s) 633, 2194, 4141
Ksp22I TGATCA 3 cut(s) 942, 2808, 3934
LweI GCATC 9 cut(s) 598, 647, 1222, 1789, 2037, 2257, 2376, 2885, 3156
MaeII ACGT 4 cut(s) 231, 2209, 3349, 3853
MaeIII GTNAC 8 cut(s) 220, 676, 1074, 1222, 1630, 1841, 2338, 3969
MfeI CAATTG 3 cut(s) 836, 2594, 3604
MflI RGATCY 2 cut(s) 1482, 3874
MhlI GDGCHC 8 cut(s) 808, 1122, 2105, 2215, 2314, 2923, 3930, 4174
MlsI TGGCCA 2 cut(s) 1394, 3085
MluNI TGGCCA 2 cut(s) 1394, 3085
MlyI GAGTC 7 cut(s) 1036, 1082, 1164, 2588, 2790, 2933, 3278
MmeI TCCRAC 3 cut(s) 1791, 2559, 3902
Mox20I TGGCCA 2 cut(s) 1394, 3085
Mph1103I ATGCAT 2 cut(s) 2391, 3506
MroXI GAANNNNTTC 2 cut(s) 777, 2127
MscI TGGCCA 2 cut(s) 1394, 3085
MslI CAYNNNNRTG 3 cut(s) 606, 721, 3185
Msp20I TGGCCA 2 cut(s) 1394, 3085
MspA1I CMGCKG 2 cut(s) 107, 1628
MspI CCGG 3 cut(s) 48, 3730, 4160
MspR9I CCNGG 5 cut(s) 534, 1203, 1947, 4004, 4073
MunI CAATTG 3 cut(s) 836, 2594, 3604
Mva1269I GAATGC 5 cut(s) 44, 434, 1858, 2196, 2389
MvaI CCWGG 5 cut(s) 534, 1203, 1947, 4004, 4073
MvnI CGCG 2 cut(s) 407, 4141
NcoI CCATGG 2 cut(s) 2064, 2949
NdeI CATATG 2 cut(s) 1753, 3454
NlaIV GGNNCC 5 cut(s) 1121, 1719, 3229, 3570, 4158
NmuCI GTSAC 3 cut(s) 1074, 1841, 2338
NruI TCGCGA 1 cut(s) 407
NsiI ATGCAT 2 cut(s) 2391, 3506
NspI RCATGY 3 cut(s) 1647, 3508, 3553
PaeI GCATGC 1 cut(s) 3508
PagI TCATGA 2 cut(s) 3838, 3937
PctI GAATGC 5 cut(s) 44, 434, 1858, 2196, 2389
PdmI GAANNNNTTC 2 cut(s) 777, 2127
PfeI GAWTC 6 cut(s) 74, 730, 3215, 3406, 3903, 4007
PflFI GACNNNGTC 1 cut(s) 3448
PleI GAGTC 7 cut(s) 1036, 1081, 1164, 2587, 2789, 2933, 3278
PmaCI CACGTG 1 cut(s) 2210
PmlI CACGTG 1 cut(s) 2210
PpsI GAGTC 7 cut(s) 1036, 1081, 1164, 2587, 2789, 2933, 3278
Ppu21I YACGTR 1 cut(s) 2210
PpuMI RGGWCCY 1 cut(s) 2116
PshBI ATTAAT 3 cut(s) 125, 737, 1929
Psp124BI GAGCTC 2 cut(s) 808, 2314
Psp1406I AACGTT 1 cut(s) 231
Psp5II RGGWCCY 1 cut(s) 2116
Psp6I CCWGG 5 cut(s) 532, 1201, 1945, 4002, 4071
PspCI CACGTG 1 cut(s) 2210
PspFI CCCAGC 1 cut(s) 2720
PspGI CCWGG 5 cut(s) 532, 1201, 1945, 4002, 4071
PspN4I GGNNCC 5 cut(s) 1121, 1719, 3229, 3570, 4158
PspPI GGNCC 3 cut(s) 18, 1278, 2116
PspPPI RGGWCCY 1 cut(s) 2116
PstI CTGCAG 1 cut(s) 32
PstNI CAGNNNCTG 3 cut(s) 641, 1628, 4050
PsuI RGATCY 2 cut(s) 1482, 3874
PsyI GACNNNGTC 1 cut(s) 3448
PvuII CAGCTG 2 cut(s) 107, 1628
RruI TCGCGA 1 cut(s) 407
RsaI GTAC 9 cut(s) 818, 1097, 1359, 1412, 2568, 2654, 3126, 3710, 4087
RsaNI GTAC 9 cut(s) 817, 1096, 1358, 1411, 2567, 2653, 3125, 3709, 4086
RseI CAYNNNNRTG 3 cut(s) 606, 721, 3185
SacI GAGCTC 2 cut(s) 808, 2314
Sau96I GGNCC 3 cut(s) 18, 1278, 2116
ScaI AGTACT 1 cut(s) 2654
SchI GAGTC 7 cut(s) 1036, 1082, 1164, 2588, 2790, 2933, 3278
ScrFI CCNGG 5 cut(s) 534, 1203, 1947, 4004, 4073
SduI GDGCHC 8 cut(s) 808, 1122, 2105, 2215, 2314, 2923, 3930, 4174
SfaNI GCATC 9 cut(s) 598, 647, 1222, 1789, 2037, 2257, 2376, 2885, 3156
SfcI CTRYAG 4 cut(s) 28, 2853, 3528, 3786
SinI GGWCC 3 cut(s) 18, 1278, 2116
SmiMI CAYNNNNRTG 3 cut(s) 606, 721, 3185
SmlI CTYRAG 2 cut(s) 764, 1282
SmoI CTYRAG 2 cut(s) 764, 1282
SpeI ACTAGT 2 cut(s) 3670, 4166
SphI GCATGC 1 cut(s) 3508
SsiI CCGC 5 cut(s) 2431, 2481, 3032, 3192, 3999
SspI AATATT 4 cut(s) 91, 825, 894, 2047
SstI GAGCTC 2 cut(s) 808, 2314
StyD4I CCNGG 5 cut(s) 532, 1201, 1945, 4002, 4071
StyI CCWWGG 3 cut(s) 1654, 2064, 2949
TaiI ACGT 4 cut(s) 234, 2212, 3352, 3856
TaqI TCGA 5 cut(s) 802, 808, 1175, 1780, 4174
TaqII GACCGA 1 cut(s) 490
TatI WGTACW 5 cut(s) 1357, 2566, 2652, 3124, 4085
TauI GCSGC 1 cut(s) 4002
TfiI GAWTC 6 cut(s) 74, 730, 3215, 3406, 3903, 4007
TseFI GTSAC 3 cut(s) 1074, 1841, 2338
Tsp45I GTSAC 3 cut(s) 1074, 1841, 2338
TspGWI ACGGA 2 cut(s) 1315, 3761
Tth111I GACNNNGTC 1 cut(s) 3448
VneI GTGCAC 1 cut(s) 2211
VpaK11BI GGWCC 3 cut(s) 18, 1278, 2116
VspI ATTAAT 3 cut(s) 125, 737, 1929
XagI CCTNNNNNAGG 2 cut(s) 315, 627
XapI RAATTY 8 cut(s) 1177, 1250, 1510, 1884, 2124, 2371, 2400, 3514
XbaI TCTAGA 2 cut(s) 149, 3910
XceI RCATGY 3 cut(s) 1647, 3508, 3553
XmiI GTMKAC 2 cut(s) 249, 2235
XmnI GAANNNNTTC 2 cut(s) 777, 2127
ZrmI AGTACT 1 cut(s) 2654
Zsp2I ATGCAT 2 cut(s) 2391, 3506
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.