Prupe.5G116700_v2.0.a1

Receptor protein kinase

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
N/A
Physical Location & Seq
Reverse (-)
11857137 .. 11857747
611 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G116700.1_v2.0.a1.CDS.3

Sequence Viewer

Length: 423 bp
ATGTATCTCTATGCTAAGCTCGAGAAGGCAACCAAAAACTTTAAAGAAGAGCTGGGAAGAGGGGCTTCCGGGGTTGTATATAAGGGTGTTCTGGCAGATAAAAGAGTGGTAGCTGTCAAGAAATTAGCAGATATTTATAAAGGAGAAGTATTTTGGGCAGAAGTAAGCACAATTGTGAAAGTCAATCACATGAACCTGTATGTTGAAAGCAAACCATTAGACAAGCATTTGTTCCCCCCAAATTTCCTTGGATGGAAAGAGAGGTTTAAAATTGCACTAAGGATTGCTAAAGGTTTATCCTATCTTCACCATGAGTGTCTAGAATGGGTTATTCATTGTGATGAAGATAGGAACATAAGACCAAGGGATTTAGTAGTGCAAATGTTGCTAGAATATGAAGAGGAACCCAACATTCAGATGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

141

Amino Acids

16.39

Weight (kDa)

8.45

Isoelectric Point (pI)

27.89

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 138
AcsI RAATTY 1 cut(s) 241
AgsI TTSAA 1 cut(s) 206
AleI CACNNNNGTG 1 cut(s) 173
AluBI AGCT 3 cut(s) 19, 52, 113
AluI AGCT 3 cut(s) 19, 52, 113
Ama87I CYCGRG 1 cut(s) 20
ApoI RAATTY 1 cut(s) 241
AsuC2I CCSGG 1 cut(s) 70
AsuHPI GGTGA 1 cut(s) 299
AvaI CYCGRG 1 cut(s) 20
BccI CCATC 1 cut(s) 246
BcnI CCSGG 1 cut(s) 70
BfaI CTAG 2 cut(s) 320, 389
BlpI GCTNAGC 1 cut(s) 15
Bme1390I CCNGG 1 cut(s) 70
BmeT110I CYCGRG 1 cut(s) 20
BmiI GGNNCC 1 cut(s) 405
BmrFI CCNGG 1 cut(s) 70
Bpu1102I GCTNAGC 1 cut(s) 15
BpuMI CCSGG 1 cut(s) 70
BsaJI CCNNGG 3 cut(s) 69, 247, 362
BseDI CCNNGG 3 cut(s) 69, 247, 362
BseGI GGATG 1 cut(s) 257
BseYI CCCAGC 1 cut(s) 52
BsiHKCI CYCGRG 1 cut(s) 20
BsiSI CCGG 1 cut(s) 69
BsoBI CYCGRG 1 cut(s) 20
Bsp1720I GCTNAGC 1 cut(s) 15
BspLI GGNNCC 1 cut(s) 405
BspQI GCTCTTC 1 cut(s) 42
BssECI CCNNGG 3 cut(s) 69, 247, 362
BssT1I CCWWGG 2 cut(s) 247, 362
Bst6I CTCTTC 3 cut(s) 42, 52, 393
BstAPI GCANNNNNTGC 1 cut(s) 385
BstDEI CTNAG 2 cut(s) 15, 278
BstF5I GGATG 1 cut(s) 257
BstMWI GCNNNNNNNGC 1 cut(s) 385
BstSCI CCNGG 1 cut(s) 68
BtsCI GGATG 1 cut(s) 257
CviAII CATG 2 cut(s) 190, 311
CviJI RGCY 4 cut(s) 19, 52, 65, 113
CviKI_1 RGCY 4 cut(s) 19, 52, 65, 113
DdeI CTNAG 2 cut(s) 15, 278
DraI TTTAAA 2 cut(s) 43, 268
Eam1104I CTCTTC 3 cut(s) 42, 52, 393
EarI CTCTTC 3 cut(s) 42, 52, 393
Eco130I CCWWGG 2 cut(s) 247, 362
Eco88I CYCGRG 1 cut(s) 20
EcoT14I CCWWGG 2 cut(s) 247, 362
ErhI CCWWGG 2 cut(s) 247, 362
FaeI CATG 2 cut(s) 193, 314
FaiI YATR 9 cut(s) 12, 79, 81, 138, 191, 201, 312, 356, 396
FalI AAGNNNNNCTT 2 cut(s) 49, 81
FatI CATG 2 cut(s) 189, 310
FokI GGATG 1 cut(s) 264
FspBI CTAG 2 cut(s) 320, 389
GsaI CCCAGC 1 cut(s) 56
HapII CCGG 1 cut(s) 69
Hin1II CATG 2 cut(s) 193, 314
HpaII CCGG 1 cut(s) 69
HphI GGTGA 1 cut(s) 299
Hpy188I TCNGA 1 cut(s) 417
Hpy188III TCNNGA 3 cut(s) 22, 118, 320
HpyAV CCTTC 1 cut(s) 19
HpyCH4V TGCA 2 cut(s) 275, 379
HpyF10VI GCNNNNNNNGC 1 cut(s) 385
HpyF3I CTNAG 2 cut(s) 15, 278
Hsp92II CATG 2 cut(s) 193, 314
LguI GCTCTTC 1 cut(s) 42
LpnPI CCDG 4 cut(s) 38, 77, 82, 209
MaeI CTAG 2 cut(s) 320, 389
MboII GAAGA 5 cut(s) 59, 69, 296, 356, 410
MfeI CAATTG 1 cut(s) 171
MluCI AATT 4 cut(s) 122, 171, 241, 270
MnlI CCTC 3 cut(s) 53, 255, 394
MseI TTAA 2 cut(s) 42, 267
MslI CAYNNNNRTG 3 cut(s) 173, 339, 416
MspI CCGG 1 cut(s) 69
MspR9I CCNGG 1 cut(s) 70
MunI CAATTG 1 cut(s) 171
MwoI GCNNNNNNNGC 1 cut(s) 385
NciI CCSGG 1 cut(s) 70
NlaIII CATG 2 cut(s) 193, 314
NlaIV GGNNCC 1 cut(s) 405
OliI CACNNNNGTG 1 cut(s) 173
PaeR7I CTCGAG 1 cut(s) 20
PciSI GCTCTTC 1 cut(s) 42
PsiI TTATAA 1 cut(s) 138
PspFI CCCAGC 1 cut(s) 52
PspN4I GGNNCC 1 cut(s) 405
RseI CAYNNNNRTG 3 cut(s) 173, 339, 416
SapI GCTCTTC 1 cut(s) 42
SaqAI TTAA 2 cut(s) 42, 267
ScrFI CCNGG 1 cut(s) 70
SetI ASST 6 cut(s) 21, 54, 115, 198, 266, 295
Sfr274I CTCGAG 1 cut(s) 20
SlaI CTCGAG 1 cut(s) 20
SmiMI CAYNNNNRTG 3 cut(s) 173, 339, 416
SmlI CTYRAG 1 cut(s) 20
SmoI CTYRAG 1 cut(s) 20
Sse9I AATT 4 cut(s) 122, 171, 241, 270
SspMI CTAG 2 cut(s) 320, 389
StyD4I CCNGG 1 cut(s) 68
StyI CCWWGG 2 cut(s) 247, 362
TaqI TCGA 1 cut(s) 21
TasI AATT 4 cut(s) 122, 171, 241, 270
Tru1I TTAA 2 cut(s) 42, 267
Tru9I TTAA 2 cut(s) 42, 267
TspDTI ATGAA 4 cut(s) 206, 323, 357, 411
XapI RAATTY 1 cut(s) 241
XbaI TCTAGA 1 cut(s) 319
XhoI CTCGAG 1 cut(s) 20
XspI CTAG 2 cut(s) 320, 389
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.