Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

N/A

Physical Location & Seq

Genomic Coordinates Reverse (-)

12924008 .. 12926286

Gene Structure 2279 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G136700.1_v2.0.a1.CDS.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 807 bp

ATGGAGACTCAAAAGTATCCTGTTGTCCCTGGGCATGAGATTGCTGGCATTGTAAAAGAGGTGGCTTCCAATGTTCAGCGCTTCAAAGTTGGTGACCATATGGGGGTGGGAACTCATGTCAACTCATGCAGAGATTGTGAGTACTGCAATGACAGATTCAATGGTGTTGATGCTGATGGTACAATCACAAAAGGAGGATACTCCAGTCATATATTTGTCCATGAATGGTACTGCTTCAACATACCAGAAAACTATCCATTGGCTTCGGCAGCCCCTCTACTTTGTGCTGGAATTACTGTTTATGCTTCGATGGTATGCCACGAGATGAACCAACATGGTAAATTCGAGGGTGATTGGCCTTGGTGGCCTAGGTCACATGGCAGTGAAGTTTGGCAAAAGGCATTTGGTTTGAATGTAACAATTTTCAGCACTAGCATATCCAAGAAAGAGGAAGCTTTAAGTCAGCTGGGTGCAGATAACTTCGTGGTCTCATCTGACAGAAATCAGATGAAGGCCCTGGTGAAGTCAGTAGACTTTATAATTGATATAGCATCTGGTGATCACCCTTTTGTTCCATACATGGAACTATTGAAAACTGGTGGAGTTCTGATTGGACTGCCAGTGCAAGCTTCGTGTTCGTTTCTCTGTCTCTTCATTTCACTCGCGCACCACATTCCTCTGCGAGTGCAAGCTTCGTCTGTCATCATTTGGCAAAAAAAGGATGCTCAGACCCGTCCAGGCCGCCTAGAACCACCCAGGCCGCCTAGGCGCCGCCTAGAACCGCCCAGGCCGCCTATATCCGCCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006725 GO:0008150 GO:0008152 GO:0009058 GO:0009698 GO:0009699 GO:0009808 GO:0009809 GO:0009987 GO:0019438 GO:0019748 GO:0044237 GO:0044249 GO:0044424 GO:0044444 GO:0044464 GO:0044550 GO:0071704 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00940 ko01100 ko01110 map00940 map01100 map01110

Pfam Domains

Protein Families

ADH_N ADH_zinc_N

Protein Analysis

269

Amino Acids

29.79

Weight (kDa)

7.15

Isoelectric Point (pI)

34.8

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	539
AccB1I	GGYRCC	1 cut(s)	768
AccI	GTMKAC	1 cut(s)	531
AccII	CGCG	1 cut(s)	665
AciI	CCGC	6 cut(s)	742, 761, 772, 782, 791, 801
AcsI	RAATTY	1 cut(s)	341
AcyI	GRCGYC	1 cut(s)	769
AfaI	GTAC	3 cut(s)	143, 181, 230
AfeI	AGCGCT	1 cut(s)	80
AfiI	CCNNNNNNNGG	1 cut(s)	103
AgsI	TTSAA	5 cut(s)	85, 160, 238, 412, 592
AjnI	CCWGG	5 cut(s)	28, 516, 736, 755, 785
AluBI	AGCT	4 cut(s)	455, 466, 629, 692
AluI	AGCT	4 cut(s)	455, 466, 629, 692
Alw26I	GTCTC	2 cut(s)	493, 653
Aor51HI	AGCGCT	1 cut(s)	80
AoxI	GGCC	6 cut(s)	356, 365, 513, 739, 758, 788
ApeKI	GCWGC	1 cut(s)	269
ApoI	RAATTY	1 cut(s)	341
AspA2I	CCTAGG	2 cut(s)	368, 764
AspLEI	GCGC	3 cut(s)	81, 667, 771
AspS9I	GGNCC	1 cut(s)	514
AsuHPI	GGTGA	5 cut(s)	104, 362, 532, 554, 569
AvrII	CCTAGG	2 cut(s)	368, 764
BaeI	ACNNNNGTAYC	2 cut(s)	190, 223
BanI	GGYRCC	1 cut(s)	768
BauI	CACGAG	1 cut(s)	320
BbvI	GCAGC	1 cut(s)	281
BccI	CCATC	2 cut(s)	170, 304
BciT130I	CCWGG	5 cut(s)	30, 518, 738, 757, 787
BciVI	GTATCC	2 cut(s)	27, 191
BclI	TGATCA	1 cut(s)	559
BcoDI	GTCTC	2 cut(s)	493, 653
BfaI	CTAG	6 cut(s)	369, 432, 746, 765, 776, 805
BfoI	RGCGCY	2 cut(s)	82, 772
BfuI	GTATCC	2 cut(s)	27, 191
BglI	GCCNNNNNGGC	2 cut(s)	364, 766
BisI	GCNGC	5 cut(s)	270, 742, 761, 772, 791
BlnI	CCTAGG	2 cut(s)	368, 764
BlsI	GCNGC	5 cut(s)	271, 743, 762, 773, 792
BmcAI	AGTACT	1 cut(s)	143
Bme1390I	CCNGG	5 cut(s)	30, 518, 738, 757, 787
BmgT120I	GGNCC	1 cut(s)	514
BmiI	GGNNCC	1 cut(s)	770
BmrFI	CCNGG	5 cut(s)	30, 518, 738, 757, 787
BmsI	GCATC	3 cut(s)	160, 560, 712
BpmI	CTGGAG	1 cut(s)	187
BsaHI	GRCGYC	1 cut(s)	769
BsaI	GGTCTC	1 cut(s)	493
BsaJI	CCNNGG	8 cut(s)	28, 29, 359, 368, 516, 755, 764, 785
Bsc4I	CCNNNNNNNGG	1 cut(s)	103
Bse1I	ACTGG	3 cut(s)	204, 601, 620
Bse3DI	GCAATG	1 cut(s)	154
BseBI	CCWGG	5 cut(s)	30, 518, 738, 757, 787
BseDI	CCNNGG	8 cut(s)	28, 29, 359, 368, 516, 755, 764, 785
BseGI	GGATG	1 cut(s)	727
BseLI	CCNNNNNNNGG	1 cut(s)	103
BseMI	GCAATG	1 cut(s)	154
BseMII	CTCAG	1 cut(s)	740
BseNI	ACTGG	3 cut(s)	204, 601, 620
BseXI	GCAGC	1 cut(s)	281
BseYI	CCCAGC	1 cut(s)	466
BsgI	GTGCAG	1 cut(s)	492
Bsh1236I	CGCG	1 cut(s)	665
BshFI	GGCC	6 cut(s)	358, 367, 515, 741, 760, 790
BshNI	GGYRCC	1 cut(s)	768
BslFI	GGGAC	1 cut(s)	11
BslI	CCNNNNNNNGG	1 cut(s)	103
BsmAI	GTCTC	2 cut(s)	493, 653
BsmFI	GGGAC	1 cut(s)	11
BsnI	GGCC	6 cut(s)	358, 367, 515, 741, 760, 790
Bso31I	GGTCTC	1 cut(s)	493
Bsp143I	GATC	1 cut(s)	559
BspACI	CCGC	6 cut(s)	742, 761, 772, 782, 791, 801
BspANI	GGCC	6 cut(s)	358, 367, 515, 741, 760, 790
BspCNI	CTCAG	1 cut(s)	739
BspFNI	CGCG	1 cut(s)	665
BspLI	GGNNCC	1 cut(s)	770
BspT107I	GGYRCC	1 cut(s)	768
BspTNI	GGTCTC	1 cut(s)	493
BsrDI	GCAATG	1 cut(s)	154
BsrI	ACTGG	3 cut(s)	204, 601, 620
BssECI	CCNNGG	8 cut(s)	28, 29, 359, 368, 516, 755, 764, 785
BssMI	GATC	1 cut(s)	559
BssNI	GRCGYC	1 cut(s)	769
BssSI	CACGAG	1 cut(s)	320
BssT1I	CCWWGG	3 cut(s)	359, 368, 764
Bst2BI	CACGAG	1 cut(s)	320
Bst2UI	CCWGG	5 cut(s)	30, 518, 738, 757, 787
Bst4CI	ACNGT	1 cut(s)	298
Bst6I	CTCTTC	1 cut(s)	656
BstACI	GRCGYC	1 cut(s)	769
BstC8I	GCNNGC	3 cut(s)	46, 627, 690
BstDEI	CTNAG	1 cut(s)	726
BstEII	GGTNACC	1 cut(s)	92
BstF5I	GGATG	1 cut(s)	727
BstFNI	CGCG	1 cut(s)	665
BstH2I	RGCGCY	2 cut(s)	82, 772
BstHHI	GCGC	3 cut(s)	81, 667, 771
BstKTI	GATC	1 cut(s)	562
BstMAI	GTCTC	2 cut(s)	493, 653
BstMBI	GATC	1 cut(s)	559
BstMWI	GCNNNNNNNGC	4 cut(s)	269, 364, 766, 790
BstNI	CCWGG	5 cut(s)	30, 518, 738, 757, 787
BstPI	GGTNACC	1 cut(s)	92
BstSCI	CCNGG	5 cut(s)	28, 516, 736, 755, 785
BstUI	CGCG	1 cut(s)	665
BstV1I	GCAGC	1 cut(s)	281
BsuI	GTATCC	2 cut(s)	27, 191
BsuRI	GGCC	6 cut(s)	358, 367, 515, 741, 760, 790
BtsCI	GGATG	1 cut(s)	727
BtsI	GCAGTG	1 cut(s)	388
BtsIMutI	CAGTG	2 cut(s)	388, 627
Cac8I	GCNNGC	3 cut(s)	46, 627, 690
CfoI	GCGC	3 cut(s)	81, 667, 771
Cfr13I	GGNCC	1 cut(s)	514
Csp6I	GTAC	3 cut(s)	142, 180, 229
CviAII	CATG	7 cut(s)	35, 116, 126, 221, 335, 377, 580
CviQI	GTAC	3 cut(s)	142, 180, 229
DdeI	CTNAG	1 cut(s)	726
DinI	GGCGCC	1 cut(s)	770
DpnI	GATC	1 cut(s)	561
DpnII	GATC	1 cut(s)	559
Eam1104I	CTCTTC	1 cut(s)	656
EarI	CTCTTC	1 cut(s)	656
EciI	GGCGGA	1 cut(s)	790
Eco130I	CCWWGG	3 cut(s)	359, 368, 764
Eco31I	GGTCTC	1 cut(s)	493
Eco47III	AGCGCT	1 cut(s)	80
Eco91I	GGTNACC	1 cut(s)	92
EcoO109I	RGGNCCY	1 cut(s)	514
EcoO65I	GGTNACC	1 cut(s)	92
EcoRII	CCWGG	5 cut(s)	28, 516, 736, 755, 785
EcoT14I	CCWWGG	3 cut(s)	359, 368, 764
EgeI	GGCGCC	1 cut(s)	770
EheI	GGCGCC	1 cut(s)	770
ErhI	CCWWGG	3 cut(s)	359, 368, 764
FaeI	CATG	7 cut(s)	38, 119, 129, 224, 338, 380, 583
FaqI	GGGAC	1 cut(s)	11
FatI	CATG	7 cut(s)	34, 115, 125, 220, 334, 376, 579
FauNDI	CATATG	1 cut(s)	99
FbaI	TGATCA	1 cut(s)	559
FblI	GTMKAC	1 cut(s)	531
Fnu4HI	GCNGC	5 cut(s)	270, 742, 761, 772, 791
FokI	GGATG	1 cut(s)	734
Fsp4HI	GCNGC	5 cut(s)	270, 742, 761, 772, 791
FspBI	CTAG	6 cut(s)	369, 432, 746, 765, 776, 805
GlaI	GCGC	3 cut(s)	80, 666, 770
GluI	GCNGC	5 cut(s)	270, 742, 761, 772, 791
GsaI	CCCAGC	1 cut(s)	470
GsuI	CTGGAG	1 cut(s)	187
HaeII	RGCGCY	2 cut(s)	82, 772
HaeIII	GGCC	6 cut(s)	358, 367, 515, 741, 760, 790
HhaI	GCGC	3 cut(s)	81, 667, 771
Hin1I	GRCGYC	1 cut(s)	769
Hin1II	CATG	7 cut(s)	38, 119, 129, 224, 338, 380, 583
Hin6I	GCGC	3 cut(s)	79, 665, 769
HinP1I	GCGC	3 cut(s)	79, 665, 769
HincII	GTYRAC	1 cut(s)	121
HindII	GTYRAC	1 cut(s)	121
HindIII	AAGCTT	3 cut(s)	453, 627, 690
HinfI	GANTC	2 cut(s)	7, 156
HphI	GGTGA	5 cut(s)	104, 362, 532, 554, 569
Hpy166II	GTNNAC	2 cut(s)	121, 532
Hpy188I	TCNGA	4 cut(s)	496, 507, 609, 729
Hpy8I	GTNNAC	2 cut(s)	121, 532
HpyAV	CCTTC	1 cut(s)	505
HpyCH4III	ACNGT	1 cut(s)	298
HpyCH4V	TGCA	5 cut(s)	129, 147, 473, 625, 688
HpyF10VI	GCNNNNNNNGC	4 cut(s)	269, 364, 766, 790
HpyF3I	CTNAG	1 cut(s)	726
Hsp92I	GRCGYC	1 cut(s)	769
Hsp92II	CATG	7 cut(s)	38, 119, 129, 224, 338, 380, 583
HspAI	GCGC	3 cut(s)	79, 665, 769
KasI	GGCGCC	1 cut(s)	768
Ksp22I	TGATCA	1 cut(s)	559
Kzo9I	GATC	1 cut(s)	559
Lsp1109I	GCAGC	1 cut(s)	281
LweI	GCATC	3 cut(s)	160, 560, 712
MaeI	CTAG	6 cut(s)	369, 432, 746, 765, 776, 805
MaeIII	GTNAC	3 cut(s)	92, 372, 415
MalI	GATC	1 cut(s)	561
MboI	GATC	1 cut(s)	559
MboII	GAAGA	1 cut(s)	643
MluCI	AATT	4 cut(s)	291, 341, 420, 540
Mly113I	GGCGCC	1 cut(s)	769
MnlI	CCTC	6 cut(s)	52, 188, 285, 340, 442, 687
MseI	TTAA	1 cut(s)	458
MslI	CAYNNNNRTG	1 cut(s)	381
MspA1I	CMGCKG	1 cut(s)	466
MspR9I	CCNGG	5 cut(s)	30, 518, 738, 757, 787
MvaI	CCWGG	5 cut(s)	30, 518, 738, 757, 787
MvnI	CGCG	1 cut(s)	665
MwoI	GCNNNNNNNGC	4 cut(s)	269, 364, 766, 790
NarI	GGCGCC	1 cut(s)	769
NdeI	CATATG	1 cut(s)	99
NdeII	GATC	1 cut(s)	559
NlaIII	CATG	7 cut(s)	38, 119, 129, 224, 338, 380, 583
NlaIV	GGNNCC	1 cut(s)	770
NmuCI	GTSAC	2 cut(s)	92, 372
PasI	CCCWGGG	1 cut(s)	29
PfeI	GAWTC	1 cut(s)	156
PkrI	GCNGC	5 cut(s)	271, 743, 762, 773, 792
PluTI	GGCGCC	1 cut(s)	772
PsiI	TTATAA	1 cut(s)	539
Psp6I	CCWGG	5 cut(s)	28, 516, 736, 755, 785
PspEI	GGTNACC	1 cut(s)	92
PspFI	CCCAGC	1 cut(s)	466
PspGI	CCWGG	5 cut(s)	28, 516, 736, 755, 785
PspN4I	GGNNCC	1 cut(s)	770
PspPI	GGNCC	1 cut(s)	514
PvuII	CAGCTG	1 cut(s)	466
RsaI	GTAC	3 cut(s)	143, 181, 230
RsaNI	GTAC	3 cut(s)	142, 180, 229
RseI	CAYNNNNRTG	1 cut(s)	381
SaqAI	TTAA	1 cut(s)	458
SatI	GCNGC	5 cut(s)	270, 742, 761, 772, 791
Sau3AI	GATC	1 cut(s)	559
Sau96I	GGNCC	1 cut(s)	514
ScaI	AGTACT	1 cut(s)	143
ScrFI	CCNGG	5 cut(s)	30, 518, 738, 757, 787
SetI	ASST	6 cut(s)	63, 374, 457, 468, 631, 694
SfaNI	GCATC	3 cut(s)	160, 560, 712
SfiI	GGCCNNNNNGGCC	1 cut(s)	364
SfoI	GGCGCC	1 cut(s)	770
SmiMI	CAYNNNNRTG	1 cut(s)	381
Sse9I	AATT	4 cut(s)	291, 341, 420, 540
SsiI	CCGC	6 cut(s)	742, 761, 772, 782, 791, 801
SspDI	GGCGCC	1 cut(s)	768
SspMI	CTAG	6 cut(s)	369, 432, 746, 765, 776, 805
StyD4I	CCNGG	5 cut(s)	28, 516, 736, 755, 785
StyI	CCWWGG	3 cut(s)	359, 368, 764
TaaI	ACNGT	1 cut(s)	298
TaqI	TCGA	2 cut(s)	308, 345
TasI	AATT	4 cut(s)	291, 341, 420, 540
TatI	WGTACW	1 cut(s)	141
TauI	GCSGC	4 cut(s)	744, 763, 774, 793
TfiI	GAWTC	1 cut(s)	156
Tru1I	TTAA	1 cut(s)	458
Tru9I	TTAA	1 cut(s)	458
TscAI	CASTG	2 cut(s)	388, 627
TseFI	GTSAC	2 cut(s)	92, 372
TseI	GCWGC	1 cut(s)	269
Tsp45I	GTSAC	2 cut(s)	92, 372
TspDTI	ATGAA	4 cut(s)	237, 341, 524, 643
TspRI	CASTG	2 cut(s)	388, 627
XapI	RAATTY	1 cut(s)	341
XmaJI	CCTAGG	2 cut(s)	368, 764
XmiI	GTMKAC	1 cut(s)	531
XspI	CTAG	6 cut(s)	369, 432, 746, 765, 776, 805
ZrmI	AGTACT	1 cut(s)	143

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.