Prupe.5G162600_v2.0.a1

Proline transporter 2-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
N/A
Physical Location & Seq
Forward (+)
14236645 .. 14238030
1386 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G162600.1_v2.0.a1.CDS.3

Sequence Viewer

Length: 648 bp
ATGGAAGGAGAAGGTAAGAAAGAAGCCTGGAGCACAGAACAAGGCCAAATAAAGGGTGACCAAGATCATGAATTTTCCCTCCCATCTGCTCATACCATTGGCCATGATTCATGGCAACAAGTTGGCTTCATGCTGGCAACAAGCTTCAATTGTGGATACATTTTGAGCTTCTCAAATCTTATGTTGGTACCATTGGGCTGGACATGGGAGGTTCAGAGGTTCATCAGATACAGAGATCTCATGGGATATTTATCCGGCAGAAAAATGTGCTACTTCACTTGGGTTTTACAATTTGTGACCCTTCTTCTAGGAAATATGGGTTTCATTCTCCTTGGTGGAAGAGCACTGAAGGAAATCAACTCAGAATTCAGTCACTCTCCATTGAGGCTCCAGTGGTTCATCGCTATCACCGGAGTGACGTTCTTCATATTTGCTTTTTTTATTCCAACAATTTCTGCAATGAGAGGTTGGCTGGAAGCCTCTACCATCGTCATCTTCGCTTACATTGTCACACTCTTGGTGGTGGTGGTTAAAGATGGGAAGACTAACAAACAGAAAGATTATGCAATCCACGGAAACAAAGTAGACAGGTTGTTCAATGCCTTCGATGCAATTTCAGCTATAATCGTATCCAGCAACTCCGGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Aa_trans

Protein Analysis

216

Amino Acids

24.33

Weight (kDa)

7.8

Isoelectric Point (pI)

21.6

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 187
AccB1I GGYRCC 1 cut(s) 187
AccI GTMKAC 1 cut(s) 585
AcoI YGGCCR 1 cut(s) 100
AcsI RAATTY 2 cut(s) 71, 365
AcuI CTGAAG 1 cut(s) 368
AfaI GTAC 1 cut(s) 189
AfiI CCNNNNNNNGG 1 cut(s) 52
AgsI TTSAA 2 cut(s) 148, 598
AjnI CCWGG 1 cut(s) 26
AleI CACNNNNGTG 1 cut(s) 413
AluBI AGCT 3 cut(s) 144, 168, 620
AluI AGCT 3 cut(s) 144, 168, 620
Alw21I GWGCWC 2 cut(s) 35, 346
AoxI GGCC 2 cut(s) 43, 100
ApoI RAATTY 2 cut(s) 71, 365
Asp718I GGTACC 1 cut(s) 187
AsuHPI GGTGA 2 cut(s) 68, 400
BalI TGGCCA 1 cut(s) 102
BanI GGYRCC 1 cut(s) 187
BbsI GAAGAC 1 cut(s) 548
Bbv12I GWGCWC 2 cut(s) 35, 346
BccI CCATC 3 cut(s) 91, 494, 530
BciT130I CCWGG 1 cut(s) 28
BciVI GTATCC 2 cut(s) 149, 640
BfaI CTAG 2 cut(s) 308, 646
BfuI GTATCC 2 cut(s) 149, 640
BglII AGATCT 1 cut(s) 235
Bme1390I CCNGG 1 cut(s) 28
BmiI GGNNCC 2 cut(s) 189, 389
BmrFI CCNGG 1 cut(s) 28
BmsI GCATC 1 cut(s) 598
BpiI GAAGAC 1 cut(s) 548
BpmI CTGGAG 2 cut(s) 49, 374
BsaBI GATNNNNATC 1 cut(s) 250
BsaJI CCNNGG 2 cut(s) 331, 571
BsaWI WCCGGW 1 cut(s) 410
Bsc4I CCNNNNNNNGG 1 cut(s) 52
Bse1I ACTGG 1 cut(s) 391
Bse3DI GCAATG 1 cut(s) 465
Bse8I GATNNNNATC 1 cut(s) 250
BseBI CCWGG 1 cut(s) 28
BseDI CCNNGG 2 cut(s) 331, 571
BseJI GATNNNNATC 1 cut(s) 250
BseLI CCNNNNNNNGG 1 cut(s) 52
BseMI GCAATG 1 cut(s) 465
BseMII CTCAG 1 cut(s) 375
BseNI ACTGG 1 cut(s) 391
BshFI GGCC 2 cut(s) 45, 102
BshNI GGYRCC 1 cut(s) 187
BsiHKAI GWGCWC 2 cut(s) 35, 346
BsiSI CCGG 3 cut(s) 255, 411, 642
BslI CCNNNNNNNGG 1 cut(s) 52
BsnI GGCC 2 cut(s) 45, 102
Bsp1286I GDGCHC 2 cut(s) 35, 346
Bsp143I GATC 2 cut(s) 64, 235
BspANI GGCC 2 cut(s) 45, 102
BspCNI CTCAG 1 cut(s) 374
BspHI TCATGA 1 cut(s) 67
BspLI GGNNCC 2 cut(s) 189, 389
BspQI GCTCTTC 1 cut(s) 334
BspT107I GGYRCC 1 cut(s) 187
BsrDI GCAATG 1 cut(s) 465
BsrI ACTGG 1 cut(s) 391
BssECI CCNNGG 2 cut(s) 331, 571
BssMI GATC 2 cut(s) 64, 235
BssT1I CCWWGG 1 cut(s) 331
Bst2UI CCWGG 1 cut(s) 28
Bst6I CTCTTC 1 cut(s) 334
BstC8I GCNNGC 1 cut(s) 135
BstDEI CTNAG 1 cut(s) 361
BstDSI CCRYGG 1 cut(s) 571
BstEII GGTNACC 1 cut(s) 56
BstKTI GATC 2 cut(s) 67, 238
BstMBI GATC 2 cut(s) 64, 235
BstMWI GCNNNNNNNGC 3 cut(s) 608, 617, 642
BstNI CCWGG 1 cut(s) 28
BstPI GGTNACC 1 cut(s) 56
BstSCI CCNGG 1 cut(s) 26
BstV2I GAAGAC 1 cut(s) 548
BstX2I RGATCY 1 cut(s) 235
BstXI CCANNNNNNTGG 1 cut(s) 198
BstYI RGATCY 1 cut(s) 235
BsuI GTATCC 2 cut(s) 149, 640
BsuRI GGCC 2 cut(s) 45, 102
BtgI CCRYGG 1 cut(s) 571
BtgZI GCGATG 1 cut(s) 385
BtsIMutI CAGTG 2 cut(s) 344, 398
Cac8I GCNNGC 1 cut(s) 135
CciI TCATGA 1 cut(s) 67
Csp6I GTAC 1 cut(s) 188
CviAII CATG 6 cut(s) 68, 104, 111, 130, 204, 241
CviQI GTAC 1 cut(s) 188
DdeI CTNAG 1 cut(s) 361
DpnI GATC 2 cut(s) 66, 237
DpnII GATC 2 cut(s) 64, 235
EaeI YGGCCR 1 cut(s) 100
Eam1104I CTCTTC 1 cut(s) 334
EarI CTCTTC 1 cut(s) 334
Eco130I CCWWGG 1 cut(s) 331
Eco57I CTGAAG 1 cut(s) 368
Eco91I GGTNACC 1 cut(s) 56
EcoO65I GGTNACC 1 cut(s) 56
EcoRI GAATTC 1 cut(s) 365
EcoRII CCWGG 1 cut(s) 26
EcoT14I CCWWGG 1 cut(s) 331
ErhI CCWWGG 1 cut(s) 331
FaeI CATG 6 cut(s) 71, 107, 114, 133, 207, 244
FatI CATG 6 cut(s) 67, 103, 110, 129, 203, 240
FblI GTMKAC 1 cut(s) 585
FspBI CTAG 2 cut(s) 308, 646
GsuI CTGGAG 2 cut(s) 49, 374
HaeIII GGCC 2 cut(s) 45, 102
HapII CCGG 3 cut(s) 255, 411, 642
Hin1II CATG 6 cut(s) 71, 107, 114, 133, 207, 244
HindIII AAGCTT 1 cut(s) 142
HinfI GANTC 1 cut(s) 107
HpaII CCGG 3 cut(s) 255, 411, 642
HphI GGTGA 2 cut(s) 68, 400
Hpy166II GTNNAC 1 cut(s) 586
Hpy188I TCNGA 3 cut(s) 216, 227, 364
Hpy188III TCNNGA 1 cut(s) 68
Hpy8I GTNNAC 1 cut(s) 586
HpyAV CCTTC 4 cut(s) 5, 311, 343, 613
HpyCH4IV ACGT 1 cut(s) 419
HpyCH4V TGCA 3 cut(s) 458, 566, 611
HpyF10VI GCNNNNNNNGC 3 cut(s) 608, 617, 642
HpyF3I CTNAG 1 cut(s) 361
HpySE526I ACGT 1 cut(s) 419
Hsp92II CATG 6 cut(s) 71, 107, 114, 133, 207, 244
KpnI GGTACC 1 cut(s) 191
Kzo9I GATC 2 cut(s) 64, 235
LguI GCTCTTC 1 cut(s) 334
LmnI GCTCC 2 cut(s) 30, 393
LpnPI CCDG 9 cut(s) 13, 40, 119, 184, 268, 404, 424, 458, 574
LweI GCATC 1 cut(s) 598
MaeI CTAG 2 cut(s) 308, 646
MaeII ACGT 1 cut(s) 419
MaeIII GTNAC 5 cut(s) 56, 295, 371, 415, 508
MalI GATC 2 cut(s) 66, 237
MboI GATC 2 cut(s) 64, 235
MboII GAAGA 5 cut(s) 296, 351, 415, 487, 553
MfeI CAATTG 1 cut(s) 148
MflI RGATCY 1 cut(s) 235
MhlI GDGCHC 2 cut(s) 35, 346
MlsI TGGCCA 1 cut(s) 102
MluCI AATT 6 cut(s) 71, 148, 290, 365, 450, 612
MluNI TGGCCA 1 cut(s) 102
MmeI TCCRAC 1 cut(s) 470
MnlI CCTC 6 cut(s) 89, 202, 210, 378, 458, 490
Mox20I TGGCCA 1 cut(s) 102
MscI TGGCCA 1 cut(s) 102
MseI TTAA 1 cut(s) 531
MslI CAYNNNNRTG 1 cut(s) 413
Msp20I TGGCCA 1 cut(s) 102
MspI CCGG 3 cut(s) 255, 411, 642
MspR9I CCNGG 1 cut(s) 28
MunI CAATTG 1 cut(s) 148
MvaI CCWGG 1 cut(s) 28
MwoI GCNNNNNNNGC 3 cut(s) 608, 617, 642
NdeII GATC 2 cut(s) 64, 235
NlaIII CATG 6 cut(s) 71, 107, 114, 133, 207, 244
NlaIV GGNNCC 2 cut(s) 189, 389
NmuCI GTSAC 5 cut(s) 56, 295, 371, 415, 508
OliI CACNNNNGTG 1 cut(s) 413
PagI TCATGA 1 cut(s) 67
PciSI GCTCTTC 1 cut(s) 334
PfeI GAWTC 1 cut(s) 107
Psp6I CCWGG 1 cut(s) 26
PspEI GGTNACC 1 cut(s) 56
PspGI CCWGG 1 cut(s) 26
PspN4I GGNNCC 2 cut(s) 189, 389
PsuI RGATCY 1 cut(s) 235
RsaI GTAC 1 cut(s) 189
RsaNI GTAC 1 cut(s) 188
RseI CAYNNNNRTG 1 cut(s) 413
SapI GCTCTTC 1 cut(s) 334
SaqAI TTAA 1 cut(s) 531
Sau3AI GATC 2 cut(s) 64, 235
ScrFI CCNGG 1 cut(s) 28
SduI GDGCHC 2 cut(s) 35, 346
SetI ASST 9 cut(s) 16, 146, 170, 213, 221, 422, 469, 593, 622
SfaNI GCATC 1 cut(s) 598
SmiMI CAYNNNNRTG 1 cut(s) 413
Sse9I AATT 6 cut(s) 71, 148, 290, 365, 450, 612
SspMI CTAG 2 cut(s) 308, 646
StyD4I CCNGG 1 cut(s) 26
StyI CCWWGG 1 cut(s) 331
TaiI ACGT 1 cut(s) 422
TaqI TCGA 1 cut(s) 606
TasI AATT 6 cut(s) 71, 148, 290, 365, 450, 612
TfiI GAWTC 1 cut(s) 107
Tru1I TTAA 1 cut(s) 531
Tru9I TTAA 1 cut(s) 531
TscAI CASTG 2 cut(s) 351, 398
TseFI GTSAC 5 cut(s) 56, 295, 371, 415, 508
Tsp45I GTSAC 5 cut(s) 56, 295, 371, 415, 508
TspDTI ATGAA 7 cut(s) 84, 99, 118, 211, 313, 388, 415
TspGWI ACGGA 1 cut(s) 588
TspRI CASTG 2 cut(s) 351, 398
XapI RAATTY 2 cut(s) 71, 365
XmiI GTMKAC 1 cut(s) 585
XspI CTAG 2 cut(s) 308, 646
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.