Prupe.5G179500_v2.0.a1

alpha-N-acetylglucosaminidase-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
N/A
Physical Location & Seq
Forward (+)
15105653 .. 15106328
676 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G179500.1_v2.0.a1.CDS.1

Sequence Viewer

Length: 429 bp
ATGGACACACTCTTAGCCTGCCATGATGGATTTCTCCTAGGAACTTGGTTAGAAAGCGCAAAGAAACTCGCCCAAGATGAAGAACAGGAAAAGCAGTTTGAATGGAATGCTAGAACTCAGATAACTATGTGGTTTGACAACACAAAGGAGGAAGCAAGTCTGCTTCGCGACTATGGAAACAAGTATTGGAGTGGGCTTCTGCAAAATTATTATGGCCCTCGAGCAGCTATATATTTTAAGTATTTAACACAAAGCTTAGAGGAGGGCAGTGAGTTTCGGTTGAAGGATTGGAGGAGGGAGTGGATAAAGCTTACAAATGATTGGCAAAACAGCAGGAAGGCATTCCCTGTGAAAAGTAGTGGAAATGCTCTCAGCACATCCAGATGGCTTTTTGATAAGTATTTAGGATCAAGTGCTGACAACATATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

143

Amino Acids

16.8

Weight (kDa)

5.89

Isoelectric Point (pI)

47.0

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 168
AclWI GGATC 1 cut(s) 415
AgsI TTSAA 2 cut(s) 101, 283
AjuI GAANNNNNNNTTGG 2 cut(s) 169, 201
AluBI AGCT 3 cut(s) 227, 255, 310
AluI AGCT 3 cut(s) 227, 255, 310
AlwI GGATC 1 cut(s) 415
Ama87I CYCGRG 1 cut(s) 219
AoxI GGCC 1 cut(s) 214
ApeKI GCWGC 1 cut(s) 224
Asp700I GAANNNNTTC 1 cut(s) 341
AspA2I CCTAGG 1 cut(s) 37
AspLEI GCGC 1 cut(s) 59
AspS9I GGNCC 1 cut(s) 215
AvaI CYCGRG 1 cut(s) 219
AvrII CCTAGG 1 cut(s) 37
BbvI GCAGC 1 cut(s) 236
BccI CCATC 2 cut(s) 20, 378
BfaI CTAG 2 cut(s) 38, 111
BisI GCNGC 1 cut(s) 225
BlnI CCTAGG 1 cut(s) 37
BlsI GCNGC 1 cut(s) 226
BmeT110I CYCGRG 1 cut(s) 219
BmgT120I GGNCC 1 cut(s) 215
BsaJI CCNNGG 1 cut(s) 37
BseDI CCNNGG 1 cut(s) 37
BseGI GGATG 1 cut(s) 377
BseMII CTCAG 2 cut(s) 131, 385
BseRI GAGGAG 2 cut(s) 275, 307
BseXI GCAGC 1 cut(s) 236
Bsh1236I CGCG 1 cut(s) 168
BshFI GGCC 1 cut(s) 216
BsiHKCI CYCGRG 1 cut(s) 219
BsmI GAATGC 2 cut(s) 112, 341
BsnI GGCC 1 cut(s) 216
BsoBI CYCGRG 1 cut(s) 219
Bsp143I GATC 1 cut(s) 407
Bsp68I TCGCGA 1 cut(s) 168
BspANI GGCC 1 cut(s) 216
BspCNI CTCAG 2 cut(s) 130, 384
BspFNI CGCG 1 cut(s) 168
BspPI GGATC 1 cut(s) 415
BssECI CCNNGG 1 cut(s) 37
BssMI GATC 1 cut(s) 407
BssT1I CCWWGG 1 cut(s) 37
BstC8I GCNNGC 1 cut(s) 19
BstDEI CTNAG 4 cut(s) 13, 117, 256, 371
BstF5I GGATG 1 cut(s) 377
BstFNI CGCG 1 cut(s) 168
BstHHI GCGC 1 cut(s) 59
BstKTI GATC 1 cut(s) 410
BstMBI GATC 1 cut(s) 407
BstUI CGCG 1 cut(s) 168
BstV1I GCAGC 1 cut(s) 236
BsuRI GGCC 1 cut(s) 216
BtsCI GGATG 1 cut(s) 377
BtsI GCAGTG 1 cut(s) 274
BtsIMutI CAGTG 1 cut(s) 274
BtuMI TCGCGA 1 cut(s) 168
Cac8I GCNNGC 1 cut(s) 19
CfoI GCGC 1 cut(s) 59
Cfr13I GGNCC 1 cut(s) 215
CviAII CATG 1 cut(s) 23
CviJI RGCY 7 cut(s) 17, 196, 216, 227, 255, 310, 388
CviKI_1 RGCY 7 cut(s) 17, 196, 216, 227, 255, 310, 388
DdeI CTNAG 4 cut(s) 13, 117, 256, 371
DpnI GATC 1 cut(s) 409
DpnII GATC 1 cut(s) 407
Eco130I CCWWGG 1 cut(s) 37
Eco88I CYCGRG 1 cut(s) 219
EcoT14I CCWWGG 1 cut(s) 37
ErhI CCWWGG 1 cut(s) 37
FaeI CATG 1 cut(s) 26
FaiI YATR 8 cut(s) 24, 128, 174, 213, 230, 232, 425, 427
FatI CATG 1 cut(s) 22
Fnu4HI GCNGC 1 cut(s) 225
FokI GGATG 1 cut(s) 364
Fsp4HI GCNGC 1 cut(s) 225
FspBI CTAG 2 cut(s) 38, 111
GlaI GCGC 1 cut(s) 58
GluI GCNGC 1 cut(s) 225
HaeIII GGCC 1 cut(s) 216
HhaI GCGC 1 cut(s) 59
Hin1II CATG 1 cut(s) 26
Hin6I GCGC 1 cut(s) 57
HinP1I GCGC 1 cut(s) 57
HindIII AAGCTT 2 cut(s) 253, 308
Hpy188I TCNGA 1 cut(s) 120
Hpy188III TCNNGA 2 cut(s) 167, 381
HpyAV CCTTC 2 cut(s) 277, 331
HpyCH4V TGCA 1 cut(s) 202
HpyF3I CTNAG 4 cut(s) 13, 117, 256, 371
Hsp92II CATG 1 cut(s) 26
HspAI GCGC 1 cut(s) 57
Kzo9I GATC 1 cut(s) 407
LpnPI CCDG 5 cut(s) 31, 71, 319, 360, 394
Lsp1109I GCAGC 1 cut(s) 236
MaeI CTAG 2 cut(s) 38, 111
MalI GATC 1 cut(s) 409
MboI GATC 1 cut(s) 407
MboII GAAGA 1 cut(s) 92
MluCI AATT 1 cut(s) 205
MnlI CCTC 6 cut(s) 142, 228, 253, 256, 285, 288
MroXI GAANNNNTTC 1 cut(s) 341
MseI TTAA 2 cut(s) 237, 245
MslI CAYNNNNRTG 1 cut(s) 382
Mva1269I GAATGC 2 cut(s) 112, 341
MvnI CGCG 1 cut(s) 168
NdeII GATC 1 cut(s) 407
NlaIII CATG 1 cut(s) 26
NruI TCGCGA 1 cut(s) 168
PaeR7I CTCGAG 1 cut(s) 219
PctI GAATGC 2 cut(s) 112, 341
PdmI GAANNNNTTC 1 cut(s) 341
PkrI GCNGC 1 cut(s) 226
PspPI GGNCC 1 cut(s) 215
PspXI VCTCGAGB 1 cut(s) 219
RruI TCGCGA 1 cut(s) 168
RseI CAYNNNNRTG 1 cut(s) 382
SaqAI TTAA 2 cut(s) 237, 245
SatI GCNGC 1 cut(s) 225
Sau3AI GATC 1 cut(s) 407
Sau96I GGNCC 1 cut(s) 215
SetI ASST 3 cut(s) 229, 257, 312
Sfr274I CTCGAG 1 cut(s) 219
SlaI CTCGAG 1 cut(s) 219
SmiMI CAYNNNNRTG 1 cut(s) 382
SmlI CTYRAG 1 cut(s) 219
SmoI CTYRAG 1 cut(s) 219
Sse9I AATT 1 cut(s) 205
SspMI CTAG 2 cut(s) 38, 111
StyI CCWWGG 1 cut(s) 37
TaqI TCGA 1 cut(s) 220
TasI AATT 1 cut(s) 205
Tru1I TTAA 2 cut(s) 237, 245
Tru9I TTAA 2 cut(s) 237, 245
TscAI CASTG 1 cut(s) 274
TseI GCWGC 1 cut(s) 224
TspDTI ATGAA 1 cut(s) 93
TspRI CASTG 1 cut(s) 274
XhoI CTCGAG 1 cut(s) 219
XmaJI CCTAGG 1 cut(s) 37
XmnI GAANNNNTTC 1 cut(s) 341
XspI CTAG 2 cut(s) 38, 111
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.