Prupe.5G191700_v2.0.a1

Belongs to the mitochondrial carrier (TC 2.A.29) family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
Physical Location & Seq
Reverse (-)
15711486 .. 15714631
3146 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G191700.1_v2.0.a1.CDS.3

Sequence Viewer

Length: 384 bp
ATGGGTAACCCACACCAGTTCATCATCTTTTTTCACCGTCAGAATTTGTGTGGGGACGGGGAGCTATTGATTGAAGCTCCTCACACAAATCAGACTATGCTCTATGAAGGCTTGAAAGATTTGAGTATGGGAAGCAAATTACAAAATCCAAATTTTCATATTGATATTTCTATTGAGGGAGTCATGCTTAGAGGAGTGGCTGGTGTGAACTTTAGGTACAATGAATGGTTGAATGCAATTAGTTGCGTATGGATGGCTGAAGATGCACAAGGGATGTTCAGAGGTAGCAGTCCAGCATCAGATCCTACTTTTATGGTTGTGGAATTTGTTAGAGACCATTTCAAAGAAGGATTAAGAACACGCATAAAGTTGCTAGCATGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

128

Amino Acids

14.42

Weight (kDa)

5.9

Isoelectric Point (pI)

31.73

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0022490)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 296
AcsI RAATTY 3 cut(s) 43, 151, 323
AcuI CTGAAG 1 cut(s) 279
AfaI GTAC 1 cut(s) 218
AgsI TTSAA 4 cut(s) 74, 115, 232, 343
AluBI AGCT 2 cut(s) 64, 77
AluI AGCT 2 cut(s) 64, 77
Alw26I GTCTC 1 cut(s) 327
AlwI GGATC 1 cut(s) 296
ApoI RAATTY 3 cut(s) 43, 151, 323
AsuHPI GGTGA 1 cut(s) 26
AsuNHI GCTAGC 1 cut(s) 373
BccI CCATC 1 cut(s) 247
BcoDI GTCTC 1 cut(s) 327
BfaI CTAG 1 cut(s) 374
BmsI GCATC 2 cut(s) 253, 305
BmtI GCTAGC 1 cut(s) 377
BsaI GGTCTC 1 cut(s) 327
Bse1I ACTGG 1 cut(s) 16
BseGI GGATG 2 cut(s) 258, 279
BseNI ACTGG 1 cut(s) 16
BseRI GAGGAG 2 cut(s) 69, 207
BslFI GGGAC 1 cut(s) 68
BsmAI GTCTC 1 cut(s) 327
BsmFI GGGAC 1 cut(s) 68
BsmI GAATGC 1 cut(s) 238
Bso31I GGTCTC 1 cut(s) 327
Bsp143I GATC 1 cut(s) 301
BspOI GCTAGC 1 cut(s) 377
BspPI GGATC 1 cut(s) 296
BspTNI GGTCTC 1 cut(s) 327
BsrI ACTGG 1 cut(s) 16
BssMI GATC 1 cut(s) 301
Bst4CI ACNGT 1 cut(s) 38
BstC8I GCNNGC 1 cut(s) 375
BstDEI CTNAG 1 cut(s) 188
BstEII GGTNACC 1 cut(s) 5
BstF5I GGATG 2 cut(s) 258, 279
BstKTI GATC 1 cut(s) 304
BstMAI GTCTC 1 cut(s) 327
BstMBI GATC 1 cut(s) 301
BstMWI GCNNNNNNNGC 1 cut(s) 263
BstNSI RCATGY 1 cut(s) 381
BstPI GGTNACC 1 cut(s) 5
BstX2I RGATCY 1 cut(s) 301
BstYI RGATCY 1 cut(s) 301
BtsCI GGATG 2 cut(s) 258, 279
Cac8I GCNNGC 1 cut(s) 375
Csp6I GTAC 1 cut(s) 217
CviAII CATG 2 cut(s) 184, 378
CviJI RGCY 5 cut(s) 64, 77, 111, 200, 257
CviKI_1 RGCY 5 cut(s) 64, 77, 111, 200, 257
CviQI GTAC 1 cut(s) 217
DdeI CTNAG 1 cut(s) 188
DpnI GATC 1 cut(s) 303
DpnII GATC 1 cut(s) 301
Eco31I GGTCTC 1 cut(s) 327
Eco57I CTGAAG 1 cut(s) 279
Eco91I GGTNACC 1 cut(s) 5
EcoO65I GGTNACC 1 cut(s) 5
FaeI CATG 2 cut(s) 187, 381
FaiI YATR 9 cut(s) 98, 105, 128, 159, 185, 250, 314, 365, 379
FaqI GGGAC 1 cut(s) 68
FatI CATG 2 cut(s) 183, 377
FokI GGATG 2 cut(s) 265, 286
FspBI CTAG 1 cut(s) 374
Hin1II CATG 2 cut(s) 187, 381
HinfI GANTC 1 cut(s) 180
HphI GGTGA 1 cut(s) 26
Hpy166II GTNNAC 1 cut(s) 208
Hpy188I TCNGA 4 cut(s) 42, 93, 281, 301
Hpy8I GTNNAC 1 cut(s) 208
HpyAV CCTTC 2 cut(s) 101, 341
HpyCH4III ACNGT 1 cut(s) 38
HpyCH4V TGCA 2 cut(s) 236, 266
HpyF10VI GCNNNNNNNGC 1 cut(s) 263
HpyF3I CTNAG 1 cut(s) 188
Hsp92II CATG 2 cut(s) 187, 381
Kzo9I GATC 1 cut(s) 301
LmnI GCTCC 2 cut(s) 61, 82
LpnPI CCDG 3 cut(s) 29, 186, 306
LweI GCATC 2 cut(s) 253, 305
MaeI CTAG 1 cut(s) 374
MaeIII GTNAC 1 cut(s) 5
MalI GATC 1 cut(s) 303
MboI GATC 1 cut(s) 301
MboII GAAGA 1 cut(s) 272
MflI RGATCY 1 cut(s) 301
MluCI AATT 5 cut(s) 43, 137, 151, 237, 323
MlyI GAGTC 1 cut(s) 189
MnlI CCTC 4 cut(s) 90, 169, 185, 275
MseI TTAA 1 cut(s) 353
Mva1269I GAATGC 1 cut(s) 238
MwoI GCNNNNNNNGC 1 cut(s) 263
NdeII GATC 1 cut(s) 301
NheI GCTAGC 1 cut(s) 373
NlaIII CATG 2 cut(s) 187, 381
NspI RCATGY 1 cut(s) 381
PctI GAATGC 1 cut(s) 238
PleI GAGTC 1 cut(s) 188
PpsI GAGTC 1 cut(s) 188
PspEI GGTNACC 1 cut(s) 5
PsrI GAACNNNNNNTAC 2 cut(s) 200, 232
PsuI RGATCY 1 cut(s) 301
RsaI GTAC 1 cut(s) 218
RsaNI GTAC 1 cut(s) 217
SaqAI TTAA 1 cut(s) 353
Sau3AI GATC 1 cut(s) 301
SchI GAGTC 1 cut(s) 189
SetI ASST 4 cut(s) 66, 79, 218, 286
SfaNI GCATC 2 cut(s) 253, 305
SgeI CNNG 8 cut(s) 28, 70, 124, 196, 213, 281, 305, 372
Sse9I AATT 5 cut(s) 43, 137, 151, 237, 323
SspMI CTAG 1 cut(s) 374
TaaI ACNGT 1 cut(s) 38
TasI AATT 5 cut(s) 43, 137, 151, 237, 323
Tru1I TTAA 1 cut(s) 353
Tru9I TTAA 1 cut(s) 353
TspDTI ATGAA 4 cut(s) 10, 120, 146, 237
XapI RAATTY 3 cut(s) 43, 151, 323
XceI RCATGY 1 cut(s) 381
XspI CTAG 1 cut(s) 374
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.