Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

N/A

Physical Location & Seq

Genomic Coordinates Forward (+)

17475249 .. 17476721

Gene Structure 1473 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G226900.1_v2.0.a1.CDS.6

Sequence Viewer

CDS Protein Promoter (2k)

Length: 912 bp

ATGAGATATAAACTAATTGCATTGCTTGTTCTGCAGCTCTGCTTTGCAGGGTTTCATATAGTCTCTAGAGTTGCATTGAACATGGGCTTAAGTAAAGTTGTTTACCCAGTTTACAGGAACCTCATTGCACTGCTTTCGTTGGGTCCCTTTGCTTATTTCTTTGCTTATTTGCTTGCTTTTAATAAAAAATGGAATGGTCTTTATAATCTTCATTGTGGTATCAGGATCACTGCAAACCAGGGATTTTTCCTTTTGGGGCTGTATTATGCGTCTCCAACTTTTGCATCTGCAATGCAAAACTCTGTTCCTGCAATTACTTTTCTAATGGCTTTGGCTGTAAGACTTGAGCATATTAACATCACAAGGAAAGATGGGCTGGCTAAAGTTATAGAAACCATTGCAAGTCTAGCGGAAGAAATGTCAAGTAGCACTGACATGCAGAACTGGAAATGGGGTTGCATCTACCTGCTTGTACACTGCGTAGCATGGGCTCGTTGGATGGTCTTTCAGTATCCGGCCAAGCTCACACTCACTTCATTCACATGCTTCTTCGGATTGATTCAGTTCCTGGTGATCGCAGTCTTCGTTGAGACTGAATTTGAGAACTGGAAAATCCAATCTGGAGAAGAATTGTTTACAATCCTATATGCTGGAATTGTGGCTTCGGGGATTGGTCCCTTGCAGACCTTAGTTGCTGTCATGGCAACTCTTGTTCTTGGTGATCAGTTATACTGTGGAGGGATTATTGGCGCACTTCTCATCATGTTAGGTCTCTACTCAGTTTTGTGGGGTAAAAATGAAGAAAACAGAGTGGTTAACCAAGGTGAAGTATTGAAGAAGCCCCTTCTTGAAGCTGATATAAAAGAAGATCATGGAATTGCATTATATCGTCATAGGCACGCTTATGCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0005887 GO:0005938 GO:0006810 GO:0007154 GO:0007165 GO:0008150 GO:0009719 GO:0009725 GO:0009733 GO:0009734 GO:0009755 GO:0009987 GO:0010033 GO:0016020 GO:0016021 GO:0022857 GO:0023052 GO:0031224 GO:0031226 GO:0032870 GO:0042221 GO:0044424 GO:0044425 GO:0044444 GO:0044459 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055085 GO:0065007 GO:0070887 GO:0071310 GO:0071365 GO:0071495 GO:0071944 GO:0099568

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

EamA

Protein Analysis

304

Amino Acids

34.02

Weight (kDa)

8.65

Isoelectric Point (pI)

32.1

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	204
Acc36I	ACCTGC	1 cut(s)	474
AciI	CCGC	1 cut(s)	410
AclWI	GGATC	1 cut(s)	233
AcoI	YGGCCR	1 cut(s)	516
AcsI	RAATTY	1 cut(s)	596
AfaI	GTAC	1 cut(s)	474
AflII	CTTAAG	1 cut(s)	88
AgsI	TTSAA	3 cut(s)	79, 835, 851
AjnI	CCWGG	2 cut(s)	237, 567
AluBI	AGCT	3 cut(s)	37, 523, 854
AluI	AGCT	3 cut(s)	37, 523, 854
Alw26I	GTCTC	4 cut(s)	67, 276, 584, 776
AlwI	GGATC	1 cut(s)	233
AlwNI	CAGNNNCTG	1 cut(s)	568
AoxI	GGCC	1 cut(s)	516
ApeKI	GCWGC	1 cut(s)	34
ApoI	RAATTY	1 cut(s)	596
AspLEI	GCGC	1 cut(s)	752
AspS9I	GGNCC	2 cut(s)	143, 674
AsuHPI	GGTGA	3 cut(s)	583, 731, 836
AvaII	GGWCC	2 cut(s)	143, 674
BanII	GRGCYC	1 cut(s)	493
BbsI	GAAGAC	1 cut(s)	574
BbvI	GCAGC	1 cut(s)	46
BccI	CCATC	2 cut(s)	365, 493
BcgI	CGANNNNNNTGC	2 cut(s)	117, 151
BciT130I	CCWGG	2 cut(s)	239, 569
BciVI	GTATCC	1 cut(s)	522
BclI	TGATCA	1 cut(s)	721
BcoDI	GTCTC	4 cut(s)	67, 276, 584, 776
BfaI	CTAG	2 cut(s)	66, 407
BfmI	CTRYAG	1 cut(s)	32
BfrI	CTTAAG	1 cut(s)	88
BfuAI	ACCTGC	1 cut(s)	474
BfuI	GTATCC	1 cut(s)	522
BisI	GCNGC	1 cut(s)	35
BlsI	GCNGC	1 cut(s)	36
Bme1390I	CCNGG	2 cut(s)	239, 569
Bme18I	GGWCC	2 cut(s)	143, 674
BmgT120I	GGNCC	2 cut(s)	143, 674
BmiI	GGNNCC	4 cut(s)	119, 144, 145, 676
BmrFI	CCNGG	2 cut(s)	239, 569
BmrI	ACTGGG	1 cut(s)	101
BmsI	GCATC	2 cut(s)	293, 468
BmuI	ACTGGG	1 cut(s)	101
BpiI	GAAGAC	1 cut(s)	574
BpmI	CTGGAG	1 cut(s)	642
BpuEI	CTTGAG	1 cut(s)	365
BsaI	GGTCTC	1 cut(s)	776
BsaJI	CCNNGG	2 cut(s)	238, 820
Bse1I	ACTGG	3 cut(s)	107, 449, 611
Bse3DI	GCAATG	4 cut(s)	20, 123, 297, 396
BseBI	CCWGG	2 cut(s)	239, 569
BseDI	CCNNGG	2 cut(s)	238, 820
BseGI	GGATG	1 cut(s)	504
BseMI	GCAATG	4 cut(s)	20, 123, 297, 396
BseMII	CTCAG	1 cut(s)	792
BseNI	ACTGG	3 cut(s)	107, 449, 611
BseXI	GCAGC	1 cut(s)	46
BshFI	GGCC	1 cut(s)	518
BsiSI	CCGG	1 cut(s)	515
BslFI	GGGAC	2 cut(s)	129, 660
BsmAI	GTCTC	4 cut(s)	67, 276, 584, 776
BsmBI	CGTCTC	1 cut(s)	276
BsmFI	GGGAC	2 cut(s)	129, 660
BsnI	GGCC	1 cut(s)	518
Bso31I	GGTCTC	1 cut(s)	776
Bsp1286I	GDGCHC	1 cut(s)	493
Bsp1407I	TGTACA	1 cut(s)	472
Bsp143I	GATC	4 cut(s)	225, 573, 721, 868
BspACI	CCGC	1 cut(s)	410
BspANI	GGCC	1 cut(s)	518
BspCNI	CTCAG	1 cut(s)	791
BspLI	GGNNCC	4 cut(s)	119, 144, 145, 676
BspMAI	CTGCAG	1 cut(s)	36
BspMI	ACCTGC	1 cut(s)	474
BspPI	GGATC	1 cut(s)	233
BspTI	CTTAAG	1 cut(s)	88
BspTNI	GGTCTC	1 cut(s)	776
BsrDI	GCAATG	4 cut(s)	20, 123, 297, 396
BsrGI	TGTACA	1 cut(s)	472
BsrI	ACTGG	3 cut(s)	107, 449, 611
BssECI	CCNNGG	2 cut(s)	238, 820
BssMI	GATC	4 cut(s)	225, 573, 721, 868
BssT1I	CCWWGG	1 cut(s)	820
Bst2UI	CCWGG	2 cut(s)	239, 569
Bst4CI	ACNGT	1 cut(s)	734
BstAFI	CTTAAG	1 cut(s)	88
BstAUI	TGTACA	1 cut(s)	472
BstC8I	GCNNGC	3 cut(s)	174, 378, 900
BstDEI	CTNAG	3 cut(s)	688, 778, 909
BstF5I	GGATG	1 cut(s)	504
BstHHI	GCGC	1 cut(s)	752
BstKTI	GATC	4 cut(s)	228, 576, 724, 871
BstMAI	GTCTC	4 cut(s)	67, 276, 584, 776
BstMBI	GATC	4 cut(s)	225, 573, 721, 868
BstMWI	GCNNNNNNNGC	3 cut(s)	31, 407, 701
BstNI	CCWGG	2 cut(s)	239, 569
BstNSI	RCATGY	2 cut(s)	439, 546
BstSCI	CCNGG	2 cut(s)	237, 567
BstSFI	CTRYAG	1 cut(s)	32
BstV1I	GCAGC	1 cut(s)	46
BstV2I	GAAGAC	1 cut(s)	574
BsuI	GTATCC	1 cut(s)	522
BsuRI	GGCC	1 cut(s)	518
BtsCI	GGATG	1 cut(s)	504
BtsI	GCAGTG	3 cut(s)	128, 228, 475
BtsIMutI	CAGTG	4 cut(s)	128, 228, 429, 475
BveI	ACCTGC	1 cut(s)	474
Cac8I	GCNNGC	3 cut(s)	174, 378, 900
CaiI	CAGNNNCTG	1 cut(s)	568
CfoI	GCGC	1 cut(s)	752
Cfr13I	GGNCC	2 cut(s)	143, 674
CseI	GACGC	1 cut(s)	258
Csp6I	GTAC	1 cut(s)	473
CviAII	CATG	7 cut(s)	82, 436, 486, 543, 700, 763, 872
CviQI	GTAC	1 cut(s)	473
DdeI	CTNAG	3 cut(s)	688, 778, 909
DpnI	GATC	4 cut(s)	227, 575, 723, 870
DpnII	GATC	4 cut(s)	225, 573, 721, 868
EaeI	YGGCCR	1 cut(s)	516
Eco130I	CCWWGG	1 cut(s)	820
Eco24I	GRGCYC	1 cut(s)	493
Eco31I	GGTCTC	1 cut(s)	776
Eco47I	GGWCC	2 cut(s)	143, 674
EcoO109I	RGGNCCY	1 cut(s)	143
EcoRII	CCWGG	2 cut(s)	237, 567
EcoT14I	CCWWGG	1 cut(s)	820
EcoT38I	GRGCYC	1 cut(s)	493
ErhI	CCWWGG	1 cut(s)	820
Esp3I	CGTCTC	1 cut(s)	276
FaeI	CATG	7 cut(s)	85, 439, 489, 546, 703, 766, 875
FaqI	GGGAC	2 cut(s)	129, 660
FatI	CATG	7 cut(s)	81, 435, 485, 542, 699, 762, 871
FbaI	TGATCA	1 cut(s)	721
Fnu4HI	GCNGC	1 cut(s)	35
FokI	GGATG	1 cut(s)	511
FriOI	GRGCYC	1 cut(s)	493
Fsp4HI	GCNGC	1 cut(s)	35
FspBI	CTAG	2 cut(s)	66, 407
GlaI	GCGC	1 cut(s)	751
GluI	GCNGC	1 cut(s)	35
GsuI	CTGGAG	1 cut(s)	642
HaeIII	GGCC	1 cut(s)	518
HapII	CCGG	1 cut(s)	515
HgaI	GACGC	1 cut(s)	258
HhaI	GCGC	1 cut(s)	752
Hin1II	CATG	7 cut(s)	85, 439, 489, 546, 703, 766, 875
Hin6I	GCGC	1 cut(s)	750
HinP1I	GCGC	1 cut(s)	750
HincII	GTYRAC	1 cut(s)	817
HindII	GTYRAC	1 cut(s)	817
HinfI	GANTC	1 cut(s)	559
HpaI	GTTAAC	1 cut(s)	817
HpaII	CCGG	1 cut(s)	515
HphI	GGTGA	3 cut(s)	583, 731, 836
Hpy166II	GTNNAC	5 cut(s)	103, 112, 475, 636, 817
Hpy188I	TCNGA	1 cut(s)	554
Hpy188III	TCNNGA	4 cut(s)	66, 223, 621, 848
Hpy8I	GTNNAC	5 cut(s)	103, 112, 475, 636, 817
HpyAV	CCTTC	1 cut(s)	854
HpyCH4III	ACNGT	1 cut(s)	734
HpyF10VI	GCNNNNNNNGC	3 cut(s)	31, 407, 701
HpyF3I	CTNAG	3 cut(s)	688, 778, 909
Hsp92II	CATG	7 cut(s)	85, 439, 489, 546, 703, 766, 875
HspAI	GCGC	1 cut(s)	750
KflI	GGGWCCC	1 cut(s)	143
Ksp22I	TGATCA	1 cut(s)	721
KspAI	GTTAAC	1 cut(s)	817
Kzo9I	GATC	4 cut(s)	225, 573, 721, 868
Lsp1109I	GCAGC	1 cut(s)	46
LweI	GCATC	2 cut(s)	293, 468
MaeI	CTAG	2 cut(s)	66, 407
MalI	GATC	4 cut(s)	227, 575, 723, 870
MboI	GATC	4 cut(s)	225, 573, 721, 868
MboII	GAAGA	8 cut(s)	200, 425, 541, 574, 638, 812, 847, 878
MhlI	GDGCHC	1 cut(s)	493
MluCI	AATT	6 cut(s)	15, 312, 596, 629, 654, 876
MmeI	TCCRAC	2 cut(s)	299, 476
MnlI	CCTC	2 cut(s)	131, 731
MseI	TTAA	4 cut(s)	89, 180, 354, 816
MslI	CAYNNNNRTG	3 cut(s)	434, 541, 903
MspCI	CTTAAG	1 cut(s)	88
MspI	CCGG	1 cut(s)	515
MspR9I	CCNGG	2 cut(s)	239, 569
MvaI	CCWGG	2 cut(s)	239, 569
MwoI	GCNNNNNNNGC	3 cut(s)	31, 407, 701
NdeII	GATC	4 cut(s)	225, 573, 721, 868
NlaIII	CATG	7 cut(s)	85, 439, 489, 546, 703, 766, 875
NlaIV	GGNNCC	4 cut(s)	119, 144, 145, 676
NspI	RCATGY	2 cut(s)	439, 546
PcsI	WCGNNNNNNNCGW	1 cut(s)	582
PfeI	GAWTC	1 cut(s)	559
PkrI	GCNGC	1 cut(s)	36
PpuMI	RGGWCCY	1 cut(s)	143
PsiI	TTATAA	1 cut(s)	204
Psp5II	RGGWCCY	1 cut(s)	143
Psp6I	CCWGG	2 cut(s)	237, 567
PspGI	CCWGG	2 cut(s)	237, 567
PspN4I	GGNNCC	4 cut(s)	119, 144, 145, 676
PspPI	GGNCC	2 cut(s)	143, 674
PspPPI	RGGWCCY	1 cut(s)	143
PstI	CTGCAG	1 cut(s)	36
PstNI	CAGNNNCTG	1 cut(s)	568
RsaI	GTAC	1 cut(s)	474
RsaNI	GTAC	1 cut(s)	473
RseI	CAYNNNNRTG	3 cut(s)	434, 541, 903
SaqAI	TTAA	4 cut(s)	89, 180, 354, 816
SatI	GCNGC	1 cut(s)	35
Sau3AI	GATC	4 cut(s)	225, 573, 721, 868
Sau96I	GGNCC	2 cut(s)	143, 674
ScrFI	CCNGG	2 cut(s)	239, 569
SduI	GDGCHC	1 cut(s)	493
SetI	ASST	8 cut(s)	39, 123, 468, 525, 689, 772, 826, 856
SfaNI	GCATC	2 cut(s)	293, 468
SfcI	CTRYAG	1 cut(s)	32
SinI	GGWCC	2 cut(s)	143, 674
SmiMI	CAYNNNNRTG	3 cut(s)	434, 541, 903
SmlI	CTYRAG	2 cut(s)	88, 344
SmoI	CTYRAG	2 cut(s)	88, 344
Sse9I	AATT	6 cut(s)	15, 312, 596, 629, 654, 876
SsiI	CCGC	1 cut(s)	410
SspMI	CTAG	2 cut(s)	66, 407
StyD4I	CCNGG	2 cut(s)	237, 567
StyI	CCWWGG	1 cut(s)	820
TaaI	ACNGT	1 cut(s)	734
TasI	AATT	6 cut(s)	15, 312, 596, 629, 654, 876
TatI	WGTACW	1 cut(s)	472
TfiI	GAWTC	1 cut(s)	559
Tru1I	TTAA	4 cut(s)	89, 180, 354, 816
Tru9I	TTAA	4 cut(s)	89, 180, 354, 816
TscAI	CASTG	4 cut(s)	135, 235, 436, 482
TseI	GCWGC	1 cut(s)	34
TspDTI	ATGAA	4 cut(s)	44, 200, 525, 813
TspRI	CASTG	4 cut(s)	135, 235, 436, 482
Vha464I	CTTAAG	1 cut(s)	88
VpaK11BI	GGWCC	2 cut(s)	143, 674
XapI	RAATTY	1 cut(s)	596
XbaI	TCTAGA	1 cut(s)	65
XceI	RCATGY	2 cut(s)	439, 546
XspI	CTAG	2 cut(s)	66, 407

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.