Prupe.6G022900_v2.0.a1

Alcohol dehydrogenase-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
N/A
Physical Location & Seq
Reverse (-)
1847517 .. 1856072
8556 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G022900.1_v2.0.a1.CDS.8

Sequence Viewer

Length: 915 bp
ATGGCATGGGTAGCTGGAAAGCCTTTGGTGATAGAGGAAGTGAATGTGAATCCACCACAGGCAATGGAGACAAGGATCAAAGTCGTCTGTACCTCTCTCTGTCGCAGTGACATCACTACCTGGGAGTCTCAGGCTATTTTTCCTCGAATATTTGGCCATGAAGCAACAAGGATTGTCGAGAGTGTTGGGCAGGGAGTTACTGAGTTTACTGTAGGCGACCATGTGCTAACAGTCTTCATTGGAGTGTGCGGGAAATGCAGGCAATGCACATCAGGTAAAAGCAACATATGTGAAGTACTGGGGCTGGAAAGGAGAGGTGTAATGCGCTGTGATCAGAGGACGCGCTTCTCCATAAATGGGGAGCCCATTTATCATTATTGTGCAGTTTCAAGTTTCAGTGAATATACAGTGGTGCACTCCGGATGTGCTGTCAAAATCAGCTCAGTTGTGCCTCTGGAGAAAGTATGCCTTCTCAGTTGTGGAGTAGCTGCAGGCTTGGGTGCAGCTTGGAATGTTGCTGATATATCTAATGGATCAAGTGTGGTGATATTTGGTCCTGGGACCGTAGGCCTTTCTGTTGCACAGGGTGCTAAGCTTAGGGGAGCATCTCAAATAATTGGTGTTGACACTAATCCTGAAAAGGGTGAAAATGAAAAAGCTTTTGGAATTACAGCATTTATCAACCCTCATGACAGCAAAGATCCTATTCAACAGATAATAACATTGAAGGGATCTCTATTTGGAGGATGGAAACCTAAATCTGATCTCCCTTCATTAGTAGATATGTACACAAAAAAGGAAATCCAAGTCGAGGAGTACATAACACATAACCTGCCATTTGAAGATGTCAACAAAGCTTTCAATCTCATGAGAGAAGGGAAGTGTTTGCGTTGTGCCATCCACATAGAAAAGTAA

Protein Analysis

305

Amino Acids

33.01

Weight (kDa)

7.01

Isoelectric Point (pI)

35.08

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 840
AccII CGCG 1 cut(s) 343
AccIII TCCGGA 1 cut(s) 419
AciI CCGC 1 cut(s) 249
AclWI GGATC 4 cut(s) 83, 541, 695, 739
AcoI YGGCCR 1 cut(s) 154
AdeI CACNNNGTG 1 cut(s) 587
AfaI GTAC 4 cut(s) 91, 297, 788, 818
AfiI CCNNNNNNNGG 3 cut(s) 357, 641, 811
AgsI TTSAA 5 cut(s) 390, 710, 727, 842, 862
AjnI CCWGG 2 cut(s) 119, 556
AjuI GAANNNNNNNTTGG 2 cut(s) 645, 677
AluBI AGCT 7 cut(s) 14, 441, 488, 506, 595, 659, 857
AluI AGCT 7 cut(s) 14, 441, 488, 506, 595, 659, 857
Alw21I GWGCWC 1 cut(s) 417
Alw26I GTCTC 2 cut(s) 62, 132
Alw44I GTGCAC 1 cut(s) 413
AlwI GGATC 4 cut(s) 83, 541, 695, 739
Aor13HI TCCGGA 1 cut(s) 419
AoxI GGCC 2 cut(s) 154, 568
ApaLI GTGCAC 1 cut(s) 413
ApeKI GCWGC 2 cut(s) 488, 503
AspLEI GCGC 2 cut(s) 327, 345
AspS9I GGNCC 2 cut(s) 554, 561
AsuHPI GGTGA 3 cut(s) 40, 556, 656
AvaII GGWCC 2 cut(s) 554, 561
BaeGI GKGCMC 1 cut(s) 417
BalI TGGCCA 1 cut(s) 156
BanII GRGCYC 1 cut(s) 366
BbsI GAAGAC 1 cut(s) 226
Bbv12I GWGCWC 1 cut(s) 417
BbvI GCAGC 2 cut(s) 475, 515
BccI CCATC 2 cut(s) 741, 905
BciT130I CCWGG 2 cut(s) 121, 558
BclI TGATCA 1 cut(s) 331
BcoDI GTCTC 2 cut(s) 62, 132
BfmI CTRYAG 2 cut(s) 210, 489
BfuAI ACCTGC 1 cut(s) 840
BisI GCNGC 2 cut(s) 489, 504
BlpI GCTNAGC 1 cut(s) 591
BlsI GCNGC 2 cut(s) 490, 505
BmcAI AGTACT 1 cut(s) 297
Bme1390I CCNGG 2 cut(s) 121, 558
Bme18I GGWCC 2 cut(s) 554, 561
BmgT120I GGNCC 2 cut(s) 554, 561
BmiI GGNNCC 2 cut(s) 363, 562
BmrFI CCNGG 2 cut(s) 121, 558
BmrI ACTGGG 1 cut(s) 308
BmsI GCATC 1 cut(s) 614
BmuI ACTGGG 1 cut(s) 308
BpiI GAAGAC 1 cut(s) 226
BpmI CTGGAG 1 cut(s) 476
Bpu10I CCTNAGC 1 cut(s) 596
Bpu1102I GCTNAGC 1 cut(s) 591
BsaJI CCNNGG 2 cut(s) 120, 557
BsaWI WCCGGW 1 cut(s) 419
Bsc4I CCNNNNNNNGG 3 cut(s) 357, 641, 811
Bse1I ACTGG 1 cut(s) 303
Bse3DI GCAATG 2 cut(s) 69, 269
BseAI TCCGGA 1 cut(s) 419
BseBI CCWGG 2 cut(s) 121, 558
BseDI CCNNGG 2 cut(s) 120, 557
BseGI GGATG 3 cut(s) 428, 752, 897
BseLI CCNNNNNNNGG 3 cut(s) 357, 641, 811
BseMI GCAATG 2 cut(s) 69, 269
BseMII CTCAG 4 cut(s) 143, 192, 456, 487
BseNI ACTGG 1 cut(s) 303
BseRI GAGGAG 1 cut(s) 827
BseSI GKGCMC 1 cut(s) 417
BseXI GCAGC 2 cut(s) 475, 515
BsgI GTGCAG 2 cut(s) 402, 522
Bsh1236I CGCG 1 cut(s) 343
BshFI GGCC 2 cut(s) 156, 570
BsiHKAI GWGCWC 1 cut(s) 417
BsiSI CCGG 1 cut(s) 420
BslFI GGGAC 1 cut(s) 574
BslI CCNNNNNNNGG 3 cut(s) 357, 641, 811
BsmAI GTCTC 2 cut(s) 62, 132
BsmFI GGGAC 1 cut(s) 574
BsnI GGCC 2 cut(s) 156, 570
Bsp1286I GDGCHC 2 cut(s) 366, 417
Bsp13I TCCGGA 1 cut(s) 419
Bsp1407I TGTACA 1 cut(s) 786
Bsp143I GATC 6 cut(s) 75, 331, 533, 700, 731, 763
Bsp1720I GCTNAGC 1 cut(s) 591
BspACI CCGC 1 cut(s) 249
BspANI GGCC 2 cut(s) 156, 570
BspCNI CTCAG 4 cut(s) 142, 193, 455, 486
BspEI TCCGGA 1 cut(s) 419
BspFNI CGCG 1 cut(s) 343
BspHI TCATGA 2 cut(s) 688, 867
BspLI GGNNCC 2 cut(s) 363, 562
BspMAI CTGCAG 1 cut(s) 493
BspMI ACCTGC 1 cut(s) 840
BspPI GGATC 4 cut(s) 83, 541, 695, 739
BsrDI GCAATG 2 cut(s) 69, 269
BsrGI TGTACA 1 cut(s) 786
BsrI ACTGG 1 cut(s) 303
BssECI CCNNGG 2 cut(s) 120, 557
BssMI GATC 6 cut(s) 75, 331, 533, 700, 731, 763
Bst2UI CCWGG 2 cut(s) 121, 558
Bst4CI ACNGT 4 cut(s) 211, 232, 409, 565
BstAPI GCANNNNNTGC 2 cut(s) 264, 587
BstAUI TGTACA 1 cut(s) 786
BstC8I GCNNGC 2 cut(s) 260, 493
BstDEI CTNAG 6 cut(s) 129, 201, 442, 473, 591, 596
BstF5I GGATG 3 cut(s) 428, 752, 897
BstFNI CGCG 1 cut(s) 343
BstHHI GCGC 2 cut(s) 327, 345
BstKTI GATC 6 cut(s) 78, 334, 536, 703, 734, 766
BstMAI GTCTC 2 cut(s) 62, 132
BstMBI GATC 6 cut(s) 75, 331, 533, 700, 731, 763
BstMWI GCNNNNNNNGC 4 cut(s) 11, 255, 264, 587
BstNI CCWGG 2 cut(s) 121, 558
BstSCI CCNGG 2 cut(s) 119, 556
BstSFI CTRYAG 2 cut(s) 210, 489
BstSLI GKGCMC 1 cut(s) 417
BstUI CGCG 1 cut(s) 343
BstV1I GCAGC 2 cut(s) 475, 515
BstV2I GAAGAC 1 cut(s) 226
BstX2I RGATCY 2 cut(s) 700, 731
BstYI RGATCY 2 cut(s) 700, 731
BsuRI GGCC 2 cut(s) 156, 570
BtsCI GGATG 3 cut(s) 428, 752, 897
BtsI GCAGTG 1 cut(s) 112
BtsIMutI CAGTG 3 cut(s) 112, 403, 414
BveI ACCTGC 1 cut(s) 840
Cac8I GCNNGC 2 cut(s) 260, 493
CciI TCATGA 2 cut(s) 688, 867
CfoI GCGC 2 cut(s) 327, 345
Cfr13I GGNCC 2 cut(s) 554, 561
CseI GACGC 1 cut(s) 349
Csp6I GTAC 4 cut(s) 90, 296, 787, 817
CviAII CATG 5 cut(s) 6, 158, 221, 689, 868
CviQI GTAC 4 cut(s) 90, 296, 787, 817
DdeI CTNAG 6 cut(s) 129, 201, 442, 473, 591, 596
DpnI GATC 6 cut(s) 77, 333, 535, 702, 733, 765
DpnII GATC 6 cut(s) 75, 331, 533, 700, 731, 763
DraIII CACNNNGTG 1 cut(s) 587
EaeI YGGCCR 1 cut(s) 154
Eco147I AGGCCT 1 cut(s) 570
Eco24I GRGCYC 1 cut(s) 366
Eco47I GGWCC 2 cut(s) 554, 561
EcoRII CCWGG 2 cut(s) 119, 556
EcoT38I GRGCYC 1 cut(s) 366
FaeI CATG 5 cut(s) 9, 161, 224, 692, 871
FalI AAGNNNNNCTT 2 cut(s) 453, 485
FaqI GGGAC 1 cut(s) 574
FatI CATG 5 cut(s) 5, 157, 220, 688, 867
FauI CCCGC 1 cut(s) 242
FauNDI CATATG 1 cut(s) 287
FbaI TGATCA 1 cut(s) 331
Fnu4HI GCNGC 2 cut(s) 489, 504
FokI GGATG 3 cut(s) 435, 759, 884
FriOI GRGCYC 1 cut(s) 366
Fsp4HI GCNGC 2 cut(s) 489, 504
GlaI GCGC 2 cut(s) 326, 344
GluI GCNGC 2 cut(s) 489, 504
GsuI CTGGAG 1 cut(s) 476
HaeIII GGCC 2 cut(s) 156, 570
HapII CCGG 1 cut(s) 420
HgaI GACGC 1 cut(s) 349
HhaI GCGC 2 cut(s) 327, 345
Hin1II CATG 5 cut(s) 9, 161, 224, 692, 871
Hin6I GCGC 2 cut(s) 325, 343
HinP1I GCGC 2 cut(s) 325, 343
HincII GTYRAC 2 cut(s) 625, 850
HindII GTYRAC 2 cut(s) 625, 850
HindIII AAGCTT 3 cut(s) 593, 657, 855
HinfI GANTC 2 cut(s) 49, 125
HpaII CCGG 1 cut(s) 420
HphI GGTGA 3 cut(s) 40, 556, 656
Hpy166II GTNNAC 5 cut(s) 207, 415, 625, 789, 850
Hpy188I TCNGA 2 cut(s) 336, 763
Hpy188III TCNNGA 6 cut(s) 178, 420, 455, 635, 689, 868
Hpy8I GTNNAC 5 cut(s) 207, 415, 625, 789, 850
HpyAV CCTTC 4 cut(s) 479, 721, 780, 869
HpyCH4III ACNGT 4 cut(s) 211, 232, 409, 565
HpyCH4V TGCA 7 cut(s) 258, 267, 383, 415, 491, 503, 581
HpyF10VI GCNNNNNNNGC 4 cut(s) 11, 255, 264, 587
HpyF3I CTNAG 6 cut(s) 129, 201, 442, 473, 591, 596
Hsp92II CATG 5 cut(s) 9, 161, 224, 692, 871
HspAI GCGC 2 cut(s) 325, 343
Kpn2I TCCGGA 1 cut(s) 419
Ksp22I TGATCA 1 cut(s) 331
Kzo9I GATC 6 cut(s) 75, 331, 533, 700, 731, 763
LmnI GCTCC 2 cut(s) 361, 602
Lsp1109I GCAGC 2 cut(s) 475, 515
LweI GCATC 1 cut(s) 614
MaeIII GTNAC 2 cut(s) 107, 196
MalI GATC 6 cut(s) 77, 333, 535, 702, 733, 765
MboI GATC 6 cut(s) 75, 331, 533, 700, 731, 763
MboII GAAGA 2 cut(s) 226, 854
MflI RGATCY 2 cut(s) 700, 731
MhlI GDGCHC 2 cut(s) 366, 417
MlsI TGGCCA 1 cut(s) 156
MluCI AATT 2 cut(s) 615, 666
MluNI TGGCCA 1 cut(s) 156
MlyI GAGTC 1 cut(s) 134
MnlI CCTC 9 cut(s) 28, 103, 153, 308, 330, 462, 696, 737, 805
Mox20I TGGCCA 1 cut(s) 156
MroI TCCGGA 1 cut(s) 419
MscI TGGCCA 1 cut(s) 156
MslI CAYNNNNRTG 2 cut(s) 242, 378
Msp20I TGGCCA 1 cut(s) 156
MspI CCGG 1 cut(s) 420
MspR9I CCNGG 2 cut(s) 121, 558
MvaI CCWGG 2 cut(s) 121, 558
MvnI CGCG 1 cut(s) 343
MwoI GCNNNNNNNGC 4 cut(s) 11, 255, 264, 587
NdeI CATATG 1 cut(s) 287
NdeII GATC 6 cut(s) 75, 331, 533, 700, 731, 763
NlaIII CATG 5 cut(s) 9, 161, 224, 692, 871
NlaIV GGNNCC 2 cut(s) 363, 562
NmuCI GTSAC 1 cut(s) 107
PagI TCATGA 2 cut(s) 688, 867
PceI AGGCCT 1 cut(s) 570
PfeI GAWTC 1 cut(s) 49
PkrI GCNGC 2 cut(s) 490, 505
PleI GAGTC 1 cut(s) 133
PpsI GAGTC 1 cut(s) 133
Psp6I CCWGG 2 cut(s) 119, 556
PspGI CCWGG 2 cut(s) 119, 556
PspN4I GGNNCC 2 cut(s) 363, 562
PspPI GGNCC 2 cut(s) 554, 561
PstI CTGCAG 1 cut(s) 493
PsuI RGATCY 2 cut(s) 700, 731
RsaI GTAC 4 cut(s) 91, 297, 788, 818
RsaNI GTAC 4 cut(s) 90, 296, 787, 817
RseI CAYNNNNRTG 2 cut(s) 242, 378
SatI GCNGC 2 cut(s) 489, 504
Sau3AI GATC 6 cut(s) 75, 331, 533, 700, 731, 763
Sau96I GGNCC 2 cut(s) 554, 561
ScaI AGTACT 1 cut(s) 297
SchI GAGTC 1 cut(s) 134
ScrFI CCNGG 2 cut(s) 121, 558
SduI GDGCHC 2 cut(s) 366, 417
SfaNI GCATC 1 cut(s) 614
SfcI CTRYAG 2 cut(s) 210, 489
SinI GGWCC 2 cut(s) 554, 561
SmiMI CAYNNNNRTG 2 cut(s) 242, 378
Sse9I AATT 2 cut(s) 615, 666
SseBI AGGCCT 1 cut(s) 570
SsiI CCGC 1 cut(s) 249
SspI AATATT 1 cut(s) 150
StuI AGGCCT 1 cut(s) 570
StyD4I CCNGG 2 cut(s) 119, 556
TaaI ACNGT 4 cut(s) 211, 232, 409, 565
TaqI TCGA 3 cut(s) 145, 177, 810
TasI AATT 2 cut(s) 615, 666
TatI WGTACW 3 cut(s) 295, 786, 816
TfiI GAWTC 1 cut(s) 49
TscAI CASTG 3 cut(s) 112, 403, 414
TseFI GTSAC 1 cut(s) 107
TseI GCWGC 2 cut(s) 488, 503
Tsp45I GTSAC 1 cut(s) 107
TspDTI ATGAA 4 cut(s) 174, 226, 666, 762
TspRI CASTG 3 cut(s) 112, 403, 414
VneI GTGCAC 1 cut(s) 413
VpaK11BI GGWCC 2 cut(s) 554, 561
ZrmI AGTACT 1 cut(s) 297
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.