Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

N/A

Physical Location & Seq

Genomic Coordinates Reverse (-)

4512894 .. 4516034

Gene Structure 3141 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G065300.1_v2.0.a1.CDS.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1350 bp

ATGGGAAACAGATTCTGTCTTTGCTTCCGCCCGTCCAATAATATCAATGAATTCTCGGACATAGAGGCCGGGAACAAAAACGAAAAGAACTCGCTGTCTGTGTTCAGCTTGGACCAACTAGGAGCTGCCACATCAGGATTCTCGTCCCATAATGTTGTCTCTGAGCATGTAGAGAAAGCTCCCAATGTGGTCTACAGAAGGAAGCTGGAAGACGGCAGTTTGATCGCCGTTAAGCGCTTCACCCTCTCCGCTTGGCCGGATTCCCGCCCATTTCTTGAGGAAGCTAGAGCTGTGGGGAGGCTAAGCAACGAGCGTTTGGCGAATTTGATTGGGTGTTGCATTGAGGATGATGAGAGATTGCTTGTGGCTGAGTTCATGCCAAATGAAACTCTCTCCAAGCACCTTTTCCAGTGGGAGACTCAACCGATGAAATGGGCAATGAGATTGAGAGTGGCTTTGTATGTGGCACACGCTTTAGAGTATTGCAGCAGCAAAGGGCAGGCATTGTACCATGATCTCAATGCTCATAGGGTCCTGTTTGATCAGGATGGAAATCCCAGACTCTCTTGCTTTGGCCTTATGAAGAATAGTAAAGATGGCAAGAGGTTTACCAACTTGGCTTTCACCCCTGCAGAGTTCTTGAGGACAGGAAGAGTGATACCAGAAAGTTTGGTTTACAGCTTTGGGACCCTGTTGCTCAATCTGCTCAGTGACAGACATATCCCTCCAAGCCATATGGTGCGGTTAGCTTCACAATGTTTGCAGTATGAACCTCATAACTGGCCAGATTTCAAGTACATTGTTTCTGCACTTTTTCCTCTTCAAGAACAAACTGAGGTTCCATCATACGTTTTGATGGGTTTTCCACATGGAAATATTCCTTCAAAGAAGACAGTGTTGTCACCTCTACGTGAAGCTTGCTCGAAATTAGATCTTGCTAGAATACATGAAATATTGCTGATGATTGGATACAAGGAGGATGAGGAGGCTCAAACTGAACTTTCTTTCCAAATGTGGACAGACCAAATGAACGAAAGATTGAACTTTAAGAAACAGGGGGATGCTGCATTTCGAGCAAAAGAATTTGCTAGTGCCATAGAATTTTACACAGAATTCATTGATCATGGGAGCATTGAATCAGTAACGTTGTTTGCTAGACGGTGCTTGTGTTACTTGATGAGTGATATGGCACGAGAAGCTCTTGGAGATGCTATGCAGGCTCTTGTACAACACCCTGAATGGCCAACTGCCTTATATCTCCAAGCAGCTGCCCTGAAGAGCCTAGGATTGACCAATGAAGCTGAGCAAACCCTAAAAGATGGCTCATCCTTGGAAGTCAAGAAAACATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006970 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009266 GO:0009409 GO:0009506 GO:0009628 GO:0009651 GO:0009719 GO:0009725 GO:0009737 GO:0009741 GO:0009742 GO:0009755 GO:0009987 GO:0010033 GO:0014070 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0030054 GO:0032870 GO:0033993 GO:0036211 GO:0038023 GO:0042221 GO:0043170 GO:0043401 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0048545 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0055044 GO:0060089 GO:0065007 GO:0070887 GO:0071310 GO:0071367 GO:0071383 GO:0071396 GO:0071407 GO:0071495 GO:0071704 GO:0071944 GO:0097305 GO:0140096 GO:1901564 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

Pkinase_Tyr

Protein Analysis

450

Amino Acids

50.95

Weight (kDa)

6.04

Isoelectric Point (pI)

41.76

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	898
AccI	GTMKAC	1 cut(s)	192
AciI	CCGC	4 cut(s)	28, 249, 265, 742
AclI	AACGTT	1 cut(s)	1145
AcoI	YGGCCR	3 cut(s)	254, 782, 1241
AcsI	RAATTY	5 cut(s)	50, 322, 1082, 1100, 1112
AcuI	CTGAAG	1 cut(s)	1295
AfaI	GTAC	3 cut(s)	509, 797, 1227
AfeI	AGCGCT	1 cut(s)	236
AgsI	TTSAA	5 cut(s)	793, 824, 885, 1042, 1136
AjuI	GAANNNNNNNTTGG	4 cut(s)	389, 421, 605, 637
AloI	GAACNNNNNNTCC	2 cut(s)	990, 1022
Alw26I	GTCTC	2 cut(s)	163, 410
AlwNI	CAGNNNCTG	1 cut(s)	15
Aor51HI	AGCGCT	1 cut(s)	236
AoxI	GGCC	5 cut(s)	66, 254, 574, 782, 1241
ApeKI	GCWGC	6 cut(s)	125, 486, 489, 1064, 1265, 1268
ApoI	RAATTY	5 cut(s)	50, 322, 1082, 1100, 1112
AspA2I	CCTAGG	1 cut(s)	1282
AspLEI	GCGC	1 cut(s)	237
AspS9I	GGNCC	3 cut(s)	112, 532, 687
AsuC2I	CCSGG	1 cut(s)	70
AsuHPI	GGTGA	3 cut(s)	232, 616, 894
AvaII	GGWCC	3 cut(s)	112, 532, 687
AvrII	CCTAGG	1 cut(s)	1282
BalI	TGGCCA	2 cut(s)	784, 1243
BauI	CACGAG	1 cut(s)	1191
BbsI	GAAGAC	2 cut(s)	216, 896
BbvI	GCAGC	6 cut(s)	112, 498, 501, 1051, 1255, 1277
BccI	CCATC	5 cut(s)	542, 590, 850, 850, 1313
BceAI	ACGGC	2 cut(s)	212, 229
BcgI	CGANNNNNNTGC	2 cut(s)	205, 239
BciVI	GTATCC	1 cut(s)	962
BclI	TGATCA	2 cut(s)	541, 1120
BcnI	CCSGG	1 cut(s)	70
BcoDI	GTCTC	2 cut(s)	163, 410
BfaI	CTAG	6 cut(s)	119, 285, 939, 1089, 1155, 1283
BfmI	CTRYAG	2 cut(s)	193, 630
BfoI	RGCGCY	1 cut(s)	238
BfuI	GTATCC	1 cut(s)	962
BglII	AGATCT	1 cut(s)	931
BisI	GCNGC	6 cut(s)	126, 487, 490, 1065, 1266, 1269
BlnI	CCTAGG	1 cut(s)	1282
BlpI	GCTNAGC	2 cut(s)	302, 1302
BlsI	GCNGC	6 cut(s)	127, 488, 491, 1066, 1267, 1270
Bme1390I	CCNGG	1 cut(s)	70
Bme18I	GGWCC	3 cut(s)	112, 532, 687
BmgT120I	GGNCC	3 cut(s)	112, 532, 687
BmiI	GGNNCC	4 cut(s)	533, 688, 689, 840
BmrFI	CCNGG	1 cut(s)	70
BmsI	GCATC	2 cut(s)	1051, 1198
BpiI	GAAGAC	2 cut(s)	216, 896
Bpu1102I	GCTNAGC	2 cut(s)	302, 1302
BpuEI	CTTGAG	2 cut(s)	296, 661
BpuMI	CCSGG	1 cut(s)	70
BsaAI	YACGTR	1 cut(s)	911
BsaBI	GATNNNNATC	1 cut(s)	552
BsaJI	CCNNGG	2 cut(s)	1282, 1329
Bse1I	ACTGG	2 cut(s)	409, 785
Bse3DI	GCAATG	1 cut(s)	444
Bse8I	GATNNNNATC	1 cut(s)	552
BseDI	CCNNGG	2 cut(s)	1282, 1329
BseGI	GGATG	5 cut(s)	352, 553, 985, 1066, 1325
BseJI	GATNNNNATC	1 cut(s)	552
BseMI	GCAATG	1 cut(s)	444
BseMII	CTCAG	5 cut(s)	153, 360, 721, 825, 1293
BseNI	ACTGG	2 cut(s)	409, 785
BseRI	GAGGAG	1 cut(s)	998
BseXI	GCAGC	6 cut(s)	112, 498, 501, 1051, 1255, 1277
BsgI	GTGCAG	1 cut(s)	792
BshFI	GGCC	5 cut(s)	68, 256, 576, 784, 1243
BsiSI	CCGG	2 cut(s)	69, 257
BslFI	GGGAC	2 cut(s)	130, 700
BsmAI	GTCTC	2 cut(s)	163, 410
BsmFI	GGGAC	2 cut(s)	130, 700
BsnI	GGCC	5 cut(s)	68, 256, 576, 784, 1243
Bsp1407I	TGTACA	1 cut(s)	1225
Bsp143I	GATC	5 cut(s)	222, 514, 541, 931, 1120
Bsp1720I	GCTNAGC	2 cut(s)	302, 1302
BspACI	CCGC	4 cut(s)	28, 249, 265, 742
BspANI	GGCC	5 cut(s)	68, 256, 576, 784, 1243
BspCNI	CTCAG	5 cut(s)	154, 361, 720, 826, 1294
BspLI	GGNNCC	4 cut(s)	533, 688, 689, 840
BspMAI	CTGCAG	1 cut(s)	634
BspQI	GCTCTTC	1 cut(s)	1271
BsrDI	GCAATG	1 cut(s)	444
BsrGI	TGTACA	1 cut(s)	1225
BsrI	ACTGG	2 cut(s)	409, 785
BssECI	CCNNGG	2 cut(s)	1282, 1329
BssMI	GATC	5 cut(s)	222, 514, 541, 931, 1120
BssSI	CACGAG	1 cut(s)	1191
BssT1I	CCWWGG	2 cut(s)	1282, 1329
Bst2BI	CACGAG	1 cut(s)	1191
Bst4CI	ACNGT	2 cut(s)	895, 1161
Bst6I	CTCTTC	3 cut(s)	646, 825, 1271
BstAUI	TGTACA	1 cut(s)	1225
BstBAI	YACGTR	1 cut(s)	911
BstC8I	GCNNGC	3 cut(s)	501, 919, 1218
BstDEI	CTNAG	6 cut(s)	162, 302, 369, 707, 834, 1302
BstF5I	GGATG	5 cut(s)	352, 553, 985, 1066, 1325
BstH2I	RGCGCY	1 cut(s)	238
BstHHI	GCGC	1 cut(s)	237
BstKTI	GATC	5 cut(s)	225, 517, 544, 934, 1123
BstMAI	GTCTC	2 cut(s)	163, 410
BstMBI	GATC	5 cut(s)	222, 514, 541, 931, 1120
BstMWI	GCNNNNNNNGC	4 cut(s)	703, 1073, 1196, 1217
BstNSI	RCATGY	1 cut(s)	170
BstSCI	CCNGG	1 cut(s)	68
BstSFI	CTRYAG	2 cut(s)	193, 630
BstV1I	GCAGC	6 cut(s)	112, 498, 501, 1051, 1255, 1277
BstV2I	GAAGAC	2 cut(s)	216, 896
BstX2I	RGATCY	1 cut(s)	931
BstYI	RGATCY	1 cut(s)	931
BsuI	GTATCC	1 cut(s)	962
BsuRI	GGCC	5 cut(s)	68, 256, 576, 784, 1243
BtsCI	GGATG	5 cut(s)	352, 553, 985, 1066, 1325
BtsIMutI	CAGTG	3 cut(s)	416, 715, 900
Cac8I	GCNNGC	3 cut(s)	501, 919, 1218
CaiI	CAGNNNCTG	1 cut(s)	15
CfoI	GCGC	1 cut(s)	237
Cfr13I	GGNCC	3 cut(s)	112, 532, 687
Csp6I	GTAC	3 cut(s)	508, 796, 1226
CviAII	CATG	6 cut(s)	167, 376, 512, 869, 947, 1124
CviQI	GTAC	3 cut(s)	508, 796, 1226
DdeI	CTNAG	6 cut(s)	162, 302, 369, 707, 834, 1302
DpnI	GATC	5 cut(s)	224, 516, 543, 933, 1122
DpnII	GATC	5 cut(s)	222, 514, 541, 931, 1120
DrdI	GACNNNNNNGTC	1 cut(s)	898
DseDI	GACNNNNNNGTC	1 cut(s)	898
EaeI	YGGCCR	3 cut(s)	254, 782, 1241
Eam1104I	CTCTTC	3 cut(s)	646, 825, 1271
EarI	CTCTTC	3 cut(s)	646, 825, 1271
EciI	GGCGGA	1 cut(s)	17
Eco130I	CCWWGG	2 cut(s)	1282, 1329
Eco47I	GGWCC	3 cut(s)	112, 532, 687
Eco47III	AGCGCT	1 cut(s)	236
Eco57I	CTGAAG	1 cut(s)	1295
EcoO109I	RGGNCCY	2 cut(s)	532, 687
EcoRI	GAATTC	2 cut(s)	50, 1112
EcoT14I	CCWWGG	2 cut(s)	1282, 1329
ErhI	CCWWGG	2 cut(s)	1282, 1329
FaeI	CATG	6 cut(s)	170, 379, 515, 872, 950, 1127
FaqI	GGGAC	2 cut(s)	130, 700
FatI	CATG	6 cut(s)	166, 375, 511, 868, 946, 1123
FauI	CCCGC	1 cut(s)	272
FauNDI	CATATG	1 cut(s)	735
FbaI	TGATCA	2 cut(s)	541, 1120
FblI	GTMKAC	1 cut(s)	192
Fnu4HI	GCNGC	6 cut(s)	126, 487, 490, 1065, 1266, 1269
FokI	GGATG	5 cut(s)	359, 560, 992, 1073, 1312
Fsp4HI	GCNGC	6 cut(s)	126, 487, 490, 1065, 1266, 1269
FspBI	CTAG	6 cut(s)	119, 285, 939, 1089, 1155, 1283
GlaI	GCGC	1 cut(s)	236
GluI	GCNGC	6 cut(s)	126, 487, 490, 1065, 1266, 1269
HaeII	RGCGCY	1 cut(s)	238
HaeIII	GGCC	5 cut(s)	68, 256, 576, 784, 1243
HapII	CCGG	2 cut(s)	69, 257
HhaI	GCGC	1 cut(s)	237
Hin1II	CATG	6 cut(s)	170, 379, 515, 872, 950, 1127
Hin6I	GCGC	1 cut(s)	235
HinP1I	GCGC	1 cut(s)	235
HindIII	AAGCTT	1 cut(s)	915
HinfI	GANTC	6 cut(s)	12, 138, 260, 418, 561, 1136
HpaII	CCGG	2 cut(s)	69, 257
HphI	GGTGA	3 cut(s)	232, 616, 894
Hpy166II	GTNNAC	4 cut(s)	193, 609, 676, 1017
Hpy188I	TCNGA	2 cut(s)	58, 163
Hpy188III	TCNNGA	6 cut(s)	135, 275, 545, 640, 824, 1339
Hpy8I	GTNNAC	4 cut(s)	193, 609, 676, 1017
HpyAV	CCTTC	2 cut(s)	192, 891
HpyCH4III	ACNGT	2 cut(s)	895, 1161
HpyCH4IV	ACGT	3 cut(s)	849, 910, 1145
HpyCH4V	TGCA	7 cut(s)	339, 486, 632, 763, 809, 1067, 1216
HpyF10VI	GCNNNNNNNGC	4 cut(s)	703, 1073, 1196, 1217
HpyF3I	CTNAG	6 cut(s)	162, 302, 369, 707, 834, 1302
HpySE526I	ACGT	3 cut(s)	849, 910, 1145
Hsp92II	CATG	6 cut(s)	170, 379, 515, 872, 950, 1127
HspAI	GCGC	1 cut(s)	235
KflI	GGGWCCC	1 cut(s)	687
Ksp22I	TGATCA	2 cut(s)	541, 1120
Kzo9I	GATC	5 cut(s)	222, 514, 541, 931, 1120
LguI	GCTCTTC	1 cut(s)	1271
LmnI	GCTCC	3 cut(s)	122, 184, 1128
Lsp1109I	GCAGC	6 cut(s)	112, 498, 501, 1051, 1255, 1277
LweI	GCATC	2 cut(s)	1051, 1198
MaeI	CTAG	6 cut(s)	119, 285, 939, 1089, 1155, 1283
MaeII	ACGT	3 cut(s)	849, 910, 1145
MaeIII	GTNAC	4 cut(s)	710, 900, 1141, 1169
MalI	GATC	5 cut(s)	224, 516, 543, 933, 1122
MboI	GATC	5 cut(s)	222, 514, 541, 931, 1120
MboII	GAAGA	6 cut(s)	221, 595, 663, 812, 901, 1288
MflI	RGATCY	1 cut(s)	931
MlsI	TGGCCA	2 cut(s)	784, 1243
MluCI	AATT	6 cut(s)	50, 322, 926, 1082, 1100, 1112
MluNI	TGGCCA	2 cut(s)	784, 1243
MlyI	GAGTC	2 cut(s)	412, 555
Mox20I	TGGCCA	2 cut(s)	784, 1243
MscI	TGGCCA	2 cut(s)	784, 1243
MseI	TTAA	2 cut(s)	231, 1047
Msp20I	TGGCCA	2 cut(s)	784, 1243
MspA1I	CMGCKG	1 cut(s)	1268
MspI	CCGG	2 cut(s)	69, 257
MspR9I	CCNGG	1 cut(s)	70
MwoI	GCNNNNNNNGC	4 cut(s)	703, 1073, 1196, 1217
NciI	CCSGG	1 cut(s)	70
NdeI	CATATG	1 cut(s)	735
NdeII	GATC	5 cut(s)	222, 514, 541, 931, 1120
NlaIII	CATG	6 cut(s)	170, 379, 515, 872, 950, 1127
NlaIV	GGNNCC	4 cut(s)	533, 688, 689, 840
NmuCI	GTSAC	2 cut(s)	710, 900
NspI	RCATGY	1 cut(s)	170
PciSI	GCTCTTC	1 cut(s)	1271
PfeI	GAWTC	4 cut(s)	12, 138, 260, 1136
PkrI	GCNGC	6 cut(s)	127, 488, 491, 1066, 1267, 1270
PleI	GAGTC	2 cut(s)	412, 555
PpsI	GAGTC	2 cut(s)	412, 555
Ppu21I	YACGTR	1 cut(s)	911
PpuMI	RGGWCCY	2 cut(s)	532, 687
Psp1406I	AACGTT	1 cut(s)	1145
Psp5II	RGGWCCY	2 cut(s)	532, 687
PspN4I	GGNNCC	4 cut(s)	533, 688, 689, 840
PspPI	GGNCC	3 cut(s)	112, 532, 687
PspPPI	RGGWCCY	2 cut(s)	532, 687
PstI	CTGCAG	1 cut(s)	634
PstNI	CAGNNNCTG	1 cut(s)	15
PsuI	RGATCY	1 cut(s)	931
PvuII	CAGCTG	1 cut(s)	1268
RsaI	GTAC	3 cut(s)	509, 797, 1227
RsaNI	GTAC	3 cut(s)	508, 796, 1226
SapI	GCTCTTC	1 cut(s)	1271
SaqAI	TTAA	2 cut(s)	231, 1047
SatI	GCNGC	6 cut(s)	126, 487, 490, 1065, 1266, 1269
Sau3AI	GATC	5 cut(s)	222, 514, 541, 931, 1120
Sau96I	GGNCC	3 cut(s)	112, 532, 687
SchI	GAGTC	2 cut(s)	412, 555
ScrFI	CCNGG	1 cut(s)	70
SfaNI	GCATC	2 cut(s)	1051, 1198
SfcI	CTRYAG	2 cut(s)	193, 630
SinI	GGWCC	3 cut(s)	112, 532, 687
SmlI	CTYRAG	2 cut(s)	275, 640
SmoI	CTYRAG	2 cut(s)	275, 640
Sse9I	AATT	6 cut(s)	50, 322, 926, 1082, 1100, 1112
SsiI	CCGC	4 cut(s)	28, 249, 265, 742
SspI	AATATT	2 cut(s)	877, 954
SspMI	CTAG	6 cut(s)	119, 285, 939, 1089, 1155, 1283
StyD4I	CCNGG	1 cut(s)	68
StyI	CCWWGG	2 cut(s)	1282, 1329
TaaI	ACNGT	2 cut(s)	895, 1161
TaiI	ACGT	3 cut(s)	852, 913, 1148
TaqI	TCGA	2 cut(s)	923, 1072
TasI	AATT	6 cut(s)	50, 322, 926, 1082, 1100, 1112
TatI	WGTACW	2 cut(s)	795, 1225
TfiI	GAWTC	4 cut(s)	12, 138, 260, 1136
Tru1I	TTAA	2 cut(s)	231, 1047
Tru9I	TTAA	2 cut(s)	231, 1047
TscAI	CASTG	3 cut(s)	416, 715, 900
TseFI	GTSAC	2 cut(s)	710, 900
TseI	GCWGC	6 cut(s)	125, 486, 489, 1064, 1265, 1268
Tsp45I	GTSAC	2 cut(s)	710, 900
TspRI	CASTG	3 cut(s)	416, 715, 900
VpaK11BI	GGWCC	3 cut(s)	112, 532, 687
XapI	RAATTY	5 cut(s)	50, 322, 1082, 1100, 1112
XceI	RCATGY	1 cut(s)	170
XmaJI	CCTAGG	1 cut(s)	1282
XmiI	GTMKAC	1 cut(s)	192
XspI	CTAG	6 cut(s)	119, 285, 939, 1089, 1155, 1283

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.