Prupe.6G098100_v2.0.a1

No description available

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
N/A
Physical Location & Seq
Forward (+)
6838841 .. 6839763
923 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G098100.1_v2.0.a1.CDS.1

Sequence Viewer

Length: 195 bp
ATGGAGATAGCAGAGGGCTTGTTGGGCAAGTTGGGTAGGCAGTGTTATGCAGTTTTGTGCTTGGGGGTGATAATTTTAGCGGTAACTCTGGTTAACTATGTCGGTACTGAGGAGCAGAAGGACCCCATGGAGCGAACCAGGAGGCGGCTTCGTGCCATCCATGGCCCGCCTTCGTCCCAGCGGCAGTCTGCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

65

Amino Acids

7.09

Weight (kDa)

9.3

Isoelectric Point (pI)

70.83

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 4 cut(s) 80, 145, 167, 181
AfaI GTAC 1 cut(s) 106
AfiI CCNNNNNNNGG 1 cut(s) 144
AjnI CCWGG 1 cut(s) 137
AoxI GGCC 1 cut(s) 163
AspS9I GGNCC 2 cut(s) 121, 164
AsuHPI GGTGA 1 cut(s) 79
AvaII GGWCC 1 cut(s) 121
BccI CCATC 1 cut(s) 164
BciT130I CCWGG 1 cut(s) 139
BisI GCNGC 2 cut(s) 146, 182
BlsI GCNGC 2 cut(s) 147, 183
Bme1390I CCNGG 1 cut(s) 139
Bme18I GGWCC 1 cut(s) 121
BmgT120I GGNCC 2 cut(s) 121, 164
BmiI GGNNCC 1 cut(s) 123
BmrFI CCNGG 1 cut(s) 139
BsaJI CCNNGG 2 cut(s) 126, 160
Bsc4I CCNNNNNNNGG 1 cut(s) 144
BseBI CCWGG 1 cut(s) 139
BseDI CCNNGG 2 cut(s) 126, 160
BseGI GGATG 1 cut(s) 156
BseLI CCNNNNNNNGG 1 cut(s) 144
BseMII CTCAG 1 cut(s) 99
BseRI GAGGAG 1 cut(s) 125
BseYI CCCAGC 1 cut(s) 177
BshFI GGCC 1 cut(s) 165
BslFI GGGAC 1 cut(s) 160
BslI CCNNNNNNNGG 1 cut(s) 144
BsmFI GGGAC 1 cut(s) 160
BsnI GGCC 1 cut(s) 165
Bsp19I CCATGG 2 cut(s) 126, 160
BspACI CCGC 4 cut(s) 80, 145, 167, 181
BspANI GGCC 1 cut(s) 165
BspCNI CTCAG 1 cut(s) 100
BspLI GGNNCC 1 cut(s) 123
BssECI CCNNGG 2 cut(s) 126, 160
BssT1I CCWWGG 2 cut(s) 126, 160
Bst2UI CCWGG 1 cut(s) 139
BstC8I GCNNGC 1 cut(s) 167
BstDEI CTNAG 1 cut(s) 108
BstDSI CCRYGG 2 cut(s) 126, 160
BstF5I GGATG 1 cut(s) 156
BstMWI GCNNNNNNNGC 1 cut(s) 24
BstNI CCWGG 1 cut(s) 139
BstSCI CCNGG 1 cut(s) 137
BsuRI GGCC 1 cut(s) 165
BtgI CCRYGG 2 cut(s) 126, 160
BtsCI GGATG 1 cut(s) 156
BtsI GCAGTG 1 cut(s) 47
BtsIMutI CAGTG 1 cut(s) 47
Cac8I GCNNGC 1 cut(s) 167
Cfr13I GGNCC 2 cut(s) 121, 164
Csp6I GTAC 1 cut(s) 105
CviAII CATG 2 cut(s) 127, 161
CviJI RGCY 3 cut(s) 18, 148, 165
CviKI_1 RGCY 3 cut(s) 18, 148, 165
CviQI GTAC 1 cut(s) 105
DdeI CTNAG 1 cut(s) 108
Eco130I CCWWGG 2 cut(s) 126, 160
Eco47I GGWCC 1 cut(s) 121
EcoO109I RGGNCCY 1 cut(s) 121
EcoRII CCWGG 1 cut(s) 137
EcoT14I CCWWGG 2 cut(s) 126, 160
ErhI CCWWGG 2 cut(s) 126, 160
FaeI CATG 2 cut(s) 130, 164
FaiI YATR 5 cut(s) 48, 99, 128, 162, 193
FaqI GGGAC 1 cut(s) 160
FatI CATG 2 cut(s) 126, 160
FauI CCCGC 1 cut(s) 174
Fnu4HI GCNGC 2 cut(s) 146, 182
FokI GGATG 1 cut(s) 143
Fsp4HI GCNGC 2 cut(s) 146, 182
GluI GCNGC 2 cut(s) 146, 182
GsaI CCCAGC 1 cut(s) 181
HaeIII GGCC 1 cut(s) 165
Hin1II CATG 2 cut(s) 130, 164
HincII GTYRAC 1 cut(s) 94
HindII GTYRAC 1 cut(s) 94
HpaI GTTAAC 1 cut(s) 94
HphI GGTGA 1 cut(s) 79
Hpy166II GTNNAC 1 cut(s) 94
Hpy8I GTNNAC 1 cut(s) 94
HpyAV CCTTC 2 cut(s) 112, 180
HpyCH4V TGCA 2 cut(s) 50, 191
HpyF10VI GCNNNNNNNGC 1 cut(s) 24
HpyF3I CTNAG 1 cut(s) 108
Hsp92II CATG 2 cut(s) 130, 164
KspAI GTTAAC 1 cut(s) 94
LmnI GCTCC 2 cut(s) 112, 130
LpnPI CCDG 4 cut(s) 74, 124, 151, 191
MaeIII GTNAC 1 cut(s) 82
MluCI AATT 1 cut(s) 72
MnlI CCTC 3 cut(s) 7, 103, 135
MseI TTAA 1 cut(s) 93
MspA1I CMGCKG 1 cut(s) 181
MspR9I CCNGG 1 cut(s) 139
MvaI CCWGG 1 cut(s) 139
MwoI GCNNNNNNNGC 1 cut(s) 24
NcoI CCATGG 2 cut(s) 126, 160
NlaIII CATG 2 cut(s) 130, 164
NlaIV GGNNCC 1 cut(s) 123
PkrI GCNGC 2 cut(s) 147, 183
PpuMI RGGWCCY 1 cut(s) 121
Psp5II RGGWCCY 1 cut(s) 121
Psp6I CCWGG 1 cut(s) 137
PspFI CCCAGC 1 cut(s) 177
PspGI CCWGG 1 cut(s) 137
PspN4I GGNNCC 1 cut(s) 123
PspPI GGNCC 2 cut(s) 121, 164
PspPPI RGGWCCY 1 cut(s) 121
RsaI GTAC 1 cut(s) 106
RsaNI GTAC 1 cut(s) 105
SaqAI TTAA 1 cut(s) 93
SatI GCNGC 2 cut(s) 146, 182
Sau96I GGNCC 2 cut(s) 121, 164
ScrFI CCNGG 1 cut(s) 139
SinI GGWCC 1 cut(s) 121
Sse9I AATT 1 cut(s) 72
SsiI CCGC 4 cut(s) 80, 145, 167, 181
StyD4I CCNGG 1 cut(s) 137
StyI CCWWGG 2 cut(s) 126, 160
TasI AATT 1 cut(s) 72
TauI GCSGC 2 cut(s) 148, 184
Tru1I TTAA 1 cut(s) 93
Tru9I TTAA 1 cut(s) 93
TscAI CASTG 1 cut(s) 47
TspRI CASTG 1 cut(s) 47
VpaK11BI GGWCC 1 cut(s) 121
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.