Prupe.6G103600_v2.0.a1
NAC Family

(NAC) domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
N/A
Physical Location & Seq
Forward (+)
7246334 .. 7247707
1374 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G103600.1

Sequence Viewer

Length: 1374 bp
ATGGCTGACTCCGATGATCGTGTCGGCTTCCGCTTCCGCCCCACAGACGAAGAACTCATCACTCTCTTTCTCTACAAGATGGTTGTAGAGAAAAAGGCTCTAATGGCAGCGTATGACACCATTATCCGGAAGTTCAACATTTTCGGCACCGAGTTCGAACCCTCCGAGATTTGGAACGGCTTTGGAGGAGAGCAACTCCATCCCCACGATCAAGAATTGTATTTCTTCTCTGAACTCAACACGTTATCTTCCAAAGCGGGTTCCCGAAAGATCAACCGCAAGGTCGGGCTTGGAGGAGGGACGTGGAGTGGAGAACGTTGTGATGCTGTTTATGATGAAGAGGGGAATGAAATCGGACATAAGCGAAAATTCCGCTACGAGAATGAAGGGTCCGAGGAACACAGTGGGTGGTTTTTAGAGGAATATAGTCTTTCTGGTGAGGGTTGCGCTTTCGATTTTGTGATTTGTCGGCTGAGAAAGAACGAGAGGTTGTTCGGAAACAAGAGAAAGAGTTCCTCATCATTATCAGAACGTCAATATCCAAAGAAGAAGATGCTCACCAAGCCCAAGCCCAGTCTTACAACAAAAGGCAAAAAAGTGAAAAAAGATGAGCAACAAATGGGATCACAAGAAAATATGAATCTGGAACCGCAAAACTACCGCTCTCCTAGTACTCTTGTGGTCTCTGATGATGAGAAAGGTAATAACCAGTTGACTTATAATAATCATGATGATCAGTTCATAAACAACAGTAATTACTTCCCTGATGATAATACCATGATGGTCAATGAAATTATTACTCTTGATGATATTAATACTCTTGATGATACTAAGATGATTTTCAGTGACATGGAATGGCCACTGCCAGAGCTGCCACAGATTGCTGATCAAAATCATGTGCCCTTGCCAGCTTCTTCGGTCGGTGCCGACTCTGTTGATGGTGTAATAGAAGCTTGTGAGCCAAGTAATTTAGTGAATGATAATCAGATGGGCAGCAATAATTCTGATGAACATCAGGATCAGTTGCTAAACAACACTGATTACTGTCCTCATGACACACTGATATTCTTGGGTGATAGTGATGAAGAAGGATACTTGATCAATTCTCCGACCATTGACGACTACATGGACGAATTATTTCCAGACCTAGCCGGGGAATGGCCATTGCCACAAATGCCACAGATTGCTGCTACAGATGAAAGCCAAGTGCCATTTCCAACTTCTGAGGTCGGTGCTGAATCAACTAAAGGAGGAGAAATGGAAGCTTATTGTAATCCAAGTCATTTCCAGCATATGGGCAATTACCAACCTTTAGAAGAAGACATCAACTGCTTCTCCAACTATTCGTTTGTGGATGAGTTAATAGGCCATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NAM

Protein Analysis

458

Amino Acids

51.92

Weight (kDa)

4.49

Isoelectric Point (pI)

42.76

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 720
AccB1I GGYRCC 2 cut(s) 146, 923
AccB7I CCANNNNNTGG 1 cut(s) 1294
AccBSI CCGCTC 1 cut(s) 663
AccIII TCCGGA 1 cut(s) 126
AciI CCGC 7 cut(s) 31, 37, 257, 277, 373, 650, 661
AclI AACGTT 1 cut(s) 316
AclWI GGATC 2 cut(s) 631, 1026
AcoI YGGCCR 2 cut(s) 857, 1160
AcsI RAATTY 1 cut(s) 368
AfaI GTAC 1 cut(s) 673
AfiI CCNNNNNNNGG 5 cut(s) 126, 171, 1153, 1158, 1294
AflIII ACRYGT 1 cut(s) 240
AgsI TTSAA 1 cut(s) 136
AjiI CACGTC 1 cut(s) 303
AjuI GAANNNNNNNTTGG 2 cut(s) 1197, 1229
AluBI AGCT 4 cut(s) 871, 911, 953, 1265
AluI AGCT 4 cut(s) 871, 911, 953, 1265
Alw26I GTCTC 1 cut(s) 688
AlwI GGATC 2 cut(s) 631, 1026
Aor13HI TCCGGA 1 cut(s) 126
AoxI GGCC 3 cut(s) 857, 1160, 1366
ApeKI GCWGC 4 cut(s) 107, 871, 993, 1187
ApoI RAATTY 1 cut(s) 368
AseI ATTAAT 1 cut(s) 813
Asp700I GAANNNNTTC 2 cut(s) 511, 1137
AspLEI GCGC 1 cut(s) 449
AspS9I GGNCC 1 cut(s) 390
AsuC2I CCSGG 1 cut(s) 1153
AsuHPI GGTGA 3 cut(s) 449, 550, 1085
AsuII TTCGAA 1 cut(s) 156
AvaII GGWCC 1 cut(s) 390
BaeGI GKGCMC 1 cut(s) 903
BalI TGGCCA 2 cut(s) 859, 1162
BanI GGYRCC 2 cut(s) 146, 923
BbsI GAAGAC 1 cut(s) 1326
BbvI GCAGC 4 cut(s) 119, 858, 1005, 1174
BccI CCATC 5 cut(s) 73, 207, 775, 932, 982
BceAI ACGGC 1 cut(s) 193
BcgI CGANNNNNNTGC 2 cut(s) 136, 170
BciVI GTATCC 1 cut(s) 1085
BclI TGATCA 3 cut(s) 733, 886, 1098
BcnI CCSGG 1 cut(s) 1153
BcoDI GTCTC 1 cut(s) 688
BfaI CTAG 2 cut(s) 669, 1148
BfmI CTRYAG 1 cut(s) 1191
BfuI GTATCC 1 cut(s) 1085
BisI GCNGC 4 cut(s) 108, 872, 994, 1188
BlsI GCNGC 4 cut(s) 109, 873, 995, 1189
BmcAI AGTACT 1 cut(s) 673
Bme1390I CCNGG 1 cut(s) 1153
Bme18I GGWCC 1 cut(s) 390
BmgBI CACGTC 1 cut(s) 303
BmgT120I GGNCC 1 cut(s) 390
BmiI GGNNCC 5 cut(s) 148, 262, 391, 648, 925
BmrFI CCNGG 1 cut(s) 1153
BmrI ACTGGG 1 cut(s) 567
BmsI GCATC 2 cut(s) 313, 543
BmuI ACTGGG 1 cut(s) 567
BpiI GAAGAC 1 cut(s) 1326
BplI GAGNNNNNCTC 2 cut(s) 180, 212
Bpu14I TTCGAA 1 cut(s) 156
BpuMI CCSGG 1 cut(s) 1153
BsaBI GATNNNNATC 2 cut(s) 891, 1011
BsaI GGTCTC 1 cut(s) 688
BsaJI CCNNGG 2 cut(s) 393, 1152
BsaWI WCCGGW 1 cut(s) 126
BsaXI ACNNNNNCTCC 2 cut(s) 1319, 1349
Bsc4I CCNNNNNNNGG 5 cut(s) 126, 171, 1153, 1158, 1294
Bse1I ACTGG 2 cut(s) 573, 709
Bse3DI GCAATG 1 cut(s) 1163
Bse8I GATNNNNATC 2 cut(s) 891, 1011
BseAI TCCGGA 1 cut(s) 126
BseDI CCNNGG 2 cut(s) 393, 1152
BseGI GGATG 2 cut(s) 199, 1360
BseJI GATNNNNATC 2 cut(s) 891, 1011
BseLI CCNNNNNNNGG 5 cut(s) 126, 171, 1153, 1158, 1294
BseMI GCAATG 1 cut(s) 1163
BseMII CTCAG 2 cut(s) 464, 1215
BseNI ACTGG 2 cut(s) 573, 709
BseRI GAGGAG 3 cut(s) 201, 309, 1266
BseSI GKGCMC 1 cut(s) 903
BseXI GCAGC 4 cut(s) 119, 858, 1005, 1174
Bsh1285I CGRYCG 1 cut(s) 921
BshFI GGCC 3 cut(s) 859, 1162, 1368
BshNI GGYRCC 2 cut(s) 146, 923
BsiEI CGRYCG 1 cut(s) 921
BsiSI CCGG 2 cut(s) 127, 1152
BslFI GGGAC 1 cut(s) 313
BslI CCNNNNNNNGG 5 cut(s) 126, 171, 1153, 1158, 1294
BsmAI GTCTC 1 cut(s) 688
BsmFI GGGAC 1 cut(s) 313
BsnI GGCC 3 cut(s) 859, 1162, 1368
Bso31I GGTCTC 1 cut(s) 688
Bsp119I TTCGAA 1 cut(s) 156
Bsp1286I GDGCHC 1 cut(s) 903
Bsp13I TCCGGA 1 cut(s) 126
Bsp143I GATC 8 cut(s) 16, 208, 270, 623, 733, 886, 1018, 1098
BspACI CCGC 7 cut(s) 31, 37, 257, 277, 373, 650, 661
BspANI GGCC 3 cut(s) 859, 1162, 1368
BspCNI CTCAG 2 cut(s) 465, 1216
BspEI TCCGGA 1 cut(s) 126
BspHI TCATGA 2 cut(s) 727, 1051
BspLI GGNNCC 5 cut(s) 148, 262, 391, 648, 925
BspPI GGATC 2 cut(s) 631, 1026
BspT104I TTCGAA 1 cut(s) 156
BspT107I GGYRCC 2 cut(s) 146, 923
BspTNI GGTCTC 1 cut(s) 688
BsrBI CCGCTC 1 cut(s) 663
BsrDI GCAATG 1 cut(s) 1163
BsrI ACTGG 2 cut(s) 573, 709
BssECI CCNNGG 2 cut(s) 393, 1152
BssMI GATC 8 cut(s) 16, 208, 270, 623, 733, 886, 1018, 1098
Bst4CI ACNGT 3 cut(s) 404, 752, 1046
Bst6I CTCTTC 1 cut(s) 333
BstBI TTCGAA 1 cut(s) 156
BstC8I GCNNGC 1 cut(s) 909
BstDEI CTNAG 3 cut(s) 473, 831, 1224
BstF5I GGATG 2 cut(s) 199, 1360
BstHHI GCGC 1 cut(s) 449
BstKTI GATC 8 cut(s) 19, 211, 273, 626, 736, 889, 1021, 1101
BstMAI GTCTC 1 cut(s) 688
BstMBI GATC 8 cut(s) 16, 208, 270, 623, 733, 886, 1018, 1098
BstMCI CGRYCG 1 cut(s) 921
BstMWI GCNNNNNNNGC 4 cut(s) 104, 562, 871, 1174
BstSCI CCNGG 1 cut(s) 1151
BstSFI CTRYAG 1 cut(s) 1191
BstSLI GKGCMC 1 cut(s) 903
BstV1I GCAGC 4 cut(s) 119, 858, 1005, 1174
BstV2I GAAGAC 1 cut(s) 1326
BsuI GTATCC 1 cut(s) 1085
BsuRI GGCC 3 cut(s) 859, 1162, 1368
BtrI CACGTC 1 cut(s) 303
BtsCI GGATG 2 cut(s) 199, 1360
BtsI GCAGTG 1 cut(s) 860
BtsIMutI CAGTG 5 cut(s) 409, 850, 860, 1035, 1058
Cac8I GCNNGC 1 cut(s) 909
CciI TCATGA 2 cut(s) 727, 1051
CfoI GCGC 1 cut(s) 449
Cfr13I GGNCC 1 cut(s) 390
Csp6I GTAC 1 cut(s) 672
CviAII CATG 6 cut(s) 728, 778, 850, 896, 1052, 1126
CviQI GTAC 1 cut(s) 672
DdeI CTNAG 3 cut(s) 473, 831, 1224
DpnI GATC 8 cut(s) 18, 210, 272, 625, 735, 888, 1020, 1100
DpnII GATC 8 cut(s) 16, 208, 270, 623, 733, 886, 1018, 1098
EaeI YGGCCR 2 cut(s) 857, 1160
Eam1104I CTCTTC 1 cut(s) 333
EarI CTCTTC 1 cut(s) 333
EciI GGCGGA 1 cut(s) 26
Eco31I GGTCTC 1 cut(s) 688
Eco47I GGWCC 1 cut(s) 390
FaeI CATG 6 cut(s) 731, 781, 853, 899, 1055, 1129
FaqI GGGAC 1 cut(s) 313
FatI CATG 6 cut(s) 727, 777, 849, 895, 1051, 1125
FauI CCCGC 1 cut(s) 250
FauNDI CATATG 1 cut(s) 1293
FbaI TGATCA 3 cut(s) 733, 886, 1098
Fnu4HI GCNGC 4 cut(s) 108, 872, 994, 1188
FokI GGATG 2 cut(s) 186, 1367
Fsp4HI GCNGC 4 cut(s) 108, 872, 994, 1188
FspBI CTAG 2 cut(s) 669, 1148
GlaI GCGC 1 cut(s) 448
GluI GCNGC 4 cut(s) 108, 872, 994, 1188
HaeIII GGCC 3 cut(s) 859, 1162, 1368
HapII CCGG 2 cut(s) 127, 1152
HhaI GCGC 1 cut(s) 449
Hin1II CATG 6 cut(s) 731, 781, 853, 899, 1055, 1129
Hin6I GCGC 1 cut(s) 447
HinP1I GCGC 1 cut(s) 447
HincII GTYRAC 1 cut(s) 714
HindII GTYRAC 1 cut(s) 714
HindIII AAGCTT 2 cut(s) 951, 1263
HinfI GANTC 4 cut(s) 8, 640, 929, 1238
HpaII CCGG 2 cut(s) 127, 1152
HphI GGTGA 3 cut(s) 449, 550, 1085
Hpy166II GTNNAC 1 cut(s) 714
Hpy8I GTNNAC 1 cut(s) 714
HpyAV CCTTC 2 cut(s) 380, 1082
HpyCH4III ACNGT 3 cut(s) 404, 752, 1046
HpyCH4IV ACGT 4 cut(s) 242, 302, 316, 532
HpyF10VI GCNNNNNNNGC 4 cut(s) 104, 562, 871, 1174
HpyF3I CTNAG 3 cut(s) 473, 831, 1224
HpySE526I ACGT 4 cut(s) 242, 302, 316, 532
Hsp92II CATG 6 cut(s) 731, 781, 853, 899, 1055, 1129
HspAI GCGC 1 cut(s) 447
Kpn2I TCCGGA 1 cut(s) 126
Ksp22I TGATCA 3 cut(s) 733, 886, 1098
Kzo9I GATC 8 cut(s) 16, 208, 270, 623, 733, 886, 1018, 1098
Lsp1109I GCAGC 4 cut(s) 119, 858, 1005, 1174
LweI GCATC 2 cut(s) 313, 543
MaeI CTAG 2 cut(s) 669, 1148
MaeII ACGT 4 cut(s) 242, 302, 316, 532
MaeIII GTNAC 1 cut(s) 845
MalI GATC 8 cut(s) 18, 210, 272, 625, 735, 888, 1020, 1100
MbiI CCGCTC 1 cut(s) 663
MboI GATC 8 cut(s) 16, 208, 270, 623, 733, 886, 1018, 1098
MhlI GDGCHC 1 cut(s) 903
MlsI TGGCCA 2 cut(s) 859, 1162
MluCI AATT 9 cut(s) 215, 368, 754, 792, 967, 1000, 1102, 1133, 1300
MluNI TGGCCA 2 cut(s) 859, 1162
MlyI GAGTC 2 cut(s) 2, 923
MmeI TCCRAC 3 cut(s) 1133, 1241, 1362
Mox20I TGGCCA 2 cut(s) 859, 1162
MroI TCCGGA 1 cut(s) 126
MroXI GAANNNNTTC 2 cut(s) 511, 1137
MscI TGGCCA 2 cut(s) 859, 1162
MseI TTAA 2 cut(s) 813, 1361
Msp20I TGGCCA 2 cut(s) 859, 1162
MspI CCGG 2 cut(s) 127, 1152
MspR9I CCNGG 1 cut(s) 1153
MwoI GCNNNNNNNGC 4 cut(s) 104, 562, 871, 1174
NciI CCSGG 1 cut(s) 1153
NdeI CATATG 1 cut(s) 1293
NdeII GATC 8 cut(s) 16, 208, 270, 623, 733, 886, 1018, 1098
NlaIII CATG 6 cut(s) 731, 781, 853, 899, 1055, 1129
NlaIV GGNNCC 5 cut(s) 148, 262, 391, 648, 925
NmuCI GTSAC 1 cut(s) 845
NspV TTCGAA 1 cut(s) 156
PagI TCATGA 2 cut(s) 727, 1051
PcsI WCGNNNNNNNCGW 1 cut(s) 162
PdmI GAANNNNTTC 2 cut(s) 511, 1137
PfeI GAWTC 2 cut(s) 640, 1238
PflMI CCANNNNNTGG 1 cut(s) 1294
PkrI GCNGC 4 cut(s) 109, 873, 995, 1189
PleI GAGTC 2 cut(s) 2, 923
PpsI GAGTC 2 cut(s) 2, 923
PshBI ATTAAT 1 cut(s) 813
PsiI TTATAA 1 cut(s) 720
Psp1406I AACGTT 1 cut(s) 316
PspN4I GGNNCC 5 cut(s) 148, 262, 391, 648, 925
PspPI GGNCC 1 cut(s) 390
RsaI GTAC 1 cut(s) 673
RsaNI GTAC 1 cut(s) 672
SaqAI TTAA 2 cut(s) 813, 1361
SatI GCNGC 4 cut(s) 108, 872, 994, 1188
Sau3AI GATC 8 cut(s) 16, 208, 270, 623, 733, 886, 1018, 1098
Sau96I GGNCC 1 cut(s) 390
ScaI AGTACT 1 cut(s) 673
SchI GAGTC 2 cut(s) 2, 923
ScrFI CCNGG 1 cut(s) 1153
SduI GDGCHC 1 cut(s) 903
SfaNI GCATC 2 cut(s) 313, 543
SfcI CTRYAG 1 cut(s) 1191
SfuI TTCGAA 1 cut(s) 156
SinI GGWCC 1 cut(s) 390
Sse9I AATT 9 cut(s) 215, 368, 754, 792, 967, 1000, 1102, 1133, 1300
SsiI CCGC 7 cut(s) 31, 37, 257, 277, 373, 650, 661
SspMI CTAG 2 cut(s) 669, 1148
StyD4I CCNGG 1 cut(s) 1151
TaaI ACNGT 3 cut(s) 404, 752, 1046
TaiI ACGT 4 cut(s) 245, 305, 319, 535
TaqI TCGA 2 cut(s) 156, 453
TaqII GACCGA 1 cut(s) 907
TasI AATT 9 cut(s) 215, 368, 754, 792, 967, 1000, 1102, 1133, 1300
TatI WGTACW 1 cut(s) 671
TfiI GAWTC 2 cut(s) 640, 1238
Tru1I TTAA 2 cut(s) 813, 1361
Tru9I TTAA 2 cut(s) 813, 1361
TscAI CASTG 5 cut(s) 409, 850, 867, 1042, 1065
TseFI GTSAC 1 cut(s) 845
TseI GCWGC 4 cut(s) 107, 871, 993, 1187
Tsp45I GTSAC 1 cut(s) 845
TspDTI ATGAA 9 cut(s) 351, 363, 399, 653, 730, 804, 1023, 1098, 1212
TspRI CASTG 5 cut(s) 409, 850, 867, 1042, 1065
Van91I CCANNNNNTGG 1 cut(s) 1294
VpaK11BI GGWCC 1 cut(s) 390
VspI ATTAAT 1 cut(s) 813
XapI RAATTY 1 cut(s) 368
XmnI GAANNNNTTC 2 cut(s) 511, 1137
XspI CTAG 2 cut(s) 669, 1148
ZrmI AGTACT 1 cut(s) 673
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.