Prupe.6G130900_v2.0.a1

Belongs to the histidine acid phosphatase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
N/A
Physical Location & Seq
Forward (+)
10190833 .. 10194554
3722 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G130900.1_v2.0.a1.CDS.11

Sequence Viewer

Length: 1395 bp
ATGAAGTCGGCCATGGCGACTATTCTGCTAGTATTGTTATCGCTATTCATCCATTCAAATGCCAAGGAAAAAGCTTTTGATGTTCGCCAACACCTTTCTATTGTGTCCAGATACAGTGTTGTGGAAGACATTGCAGATAGTTCATTTGTACCATCGAAGATTCCAGATGGATGTACTCCTATTCACTTAAATCTCGTGGCAAGGCATGAAAATCGTTCTCCTACCAAGAAACGGATTAAAGAGTTGGACAACTTGGCAGCTCATCTGGAGGTGTTATTGAGAGAAGCCGAAGAACAGAACCTATCTTTGGAAAAACTTCCTGGTTGGTTAAAGGGTGGAGAATTAATTATCCAAGGAGAGGATGAACTCTATGATATTGGGATCAGGACTCGAGCAAGATTTCCAAATTTGTTTAATGATGATTACCATCCAGATGTTTATGCAATAAAAGCAACACAGGTCCCTGGGGCATCAGCCAGTGCTGTGGCATTTGGCATGGGATTGTTTAGTGGGAAAGGAAGTCTTGGACCAGGGCGTCATCGAGCTTTTGTTGTACCCAATGAAAGCCGTGCAAGTGATACAATGCTAAGGTTTCATGATTATTGCCAAAACTACAAGGCATTTAAGAAAAGTCAGGAGCCCGCTGTTGATAAGCTTAAGGAACCTGTTTATGATGAAATTACTTCTGCGTTAAGAAGGCGCCACAGGCTGAATCTTACAAGGAAGGATAAAACTTCTCTGTGGTTTCTGTGCAAACAGGAAGCATCCTTGTTGAATATAGTTGATCAAGCTTGTGCACTTTTTAGCCCTTCTGAGGTTTCTTTGCTGCAGTGGACAGATGATTTGGAGGCCTTTATATTAAAGGGGTATGGTAAATCAATAAACTATAAAATGGGAGTGCCCTTACTTGAAGATGTTGTGCAGTCCATGGAGCAGGCTATTAAGGCTGAAGAAGATAACCCAATAGCAAGGCTAAGGTTCGCACATGCAGAAACTGTGGTTCCATTTTCATGCCTGCTTGGACTTTTTCTTGACGGATCTAAATTTCAAAAAATACAGAGGGAACAGTCCTTGCAACTCCCTCCAAAGCATCCCCAGAAGAGAAATTGGAGGGGCAATACTGTGACACCTTTTGGTGGGAATAACATACTGGTTCTGTACTGTTGTCTAGCCAACACATCAAACAAGCACTTTGTGCAAGTGCTGCACAATGAACATCCGATTCCAATGCCAGAAAGAATAGTTGCTCCTCATTTGAAGCATGACTATAATTCTGTGTGCAATGTAAAACTGGAACAACAAGAGCAGAAGCCTGTAGCCAGTAAGTTATCTCAACTGTTCCGTTGGATGTTCTCACTGGGGAATGGTGATAAAAGGTCCCTTGATGAATTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00010 ko00562 ko01100 map00010 map00562 map01100
Pfam Domains
Protein Families
His_Phos_2

Protein Analysis

465

Amino Acids

52.49

Weight (kDa)

8.61

Isoelectric Point (pI)

48.07

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 534
AccB1I GGYRCC 1 cut(s) 699
AciI CCGC 1 cut(s) 642
AclWI GGATC 2 cut(s) 389, 1045
AcoI YGGCCR 1 cut(s) 9
AcsI RAATTY 2 cut(s) 406, 1043
AcuI CTGAAG 1 cut(s) 969
AcyI GRCGYC 2 cut(s) 535, 700
AdeI CACNNNGTG 1 cut(s) 1195
AfaI GTAC 4 cut(s) 150, 175, 555, 1160
AfiI CCNNNNNNNGG 5 cut(s) 231, 307, 358, 814, 1136
AflII CTTAAG 1 cut(s) 656
AgsI TTSAA 5 cut(s) 57, 775, 911, 1049, 1258
AjnI CCWGG 3 cut(s) 319, 463, 529
AjuI GAANNNNNNNTTGG 2 cut(s) 290, 322
AluBI AGCT 5 cut(s) 74, 260, 545, 655, 791
AluI AGCT 5 cut(s) 74, 260, 545, 655, 791
Alw21I GWGCWC 1 cut(s) 799
Alw44I GTGCAC 1 cut(s) 795
AlwI GGATC 2 cut(s) 389, 1045
AlwNI CAGNNNCTG 1 cut(s) 995
Ama87I CYCGRG 1 cut(s) 390
AoxI GGCC 2 cut(s) 9, 849
ApaLI GTGCAC 1 cut(s) 795
ApeKI GCWGC 3 cut(s) 257, 826, 1204
ApoI RAATTY 2 cut(s) 406, 1043
ArsI GACNNNNNNTTYG 2 cut(s) 826, 858
AseI ATTAAT 1 cut(s) 344
Asp700I GAANNNNTTC 1 cut(s) 315
AspLEI GCGC 1 cut(s) 702
AspS9I GGNCC 3 cut(s) 460, 527, 1377
AsuHPI GGTGA 1 cut(s) 1379
AvaI CYCGRG 1 cut(s) 390
AvaII GGWCC 3 cut(s) 460, 527, 1377
BaeGI GKGCMC 2 cut(s) 799, 903
BanI GGYRCC 1 cut(s) 699
BanII GRGCYC 1 cut(s) 642
BauI CACGAG 1 cut(s) 194
BbsI GAAGAC 1 cut(s) 132
Bbv12I GWGCWC 1 cut(s) 799
BbvI GCAGC 3 cut(s) 269, 813, 1191
BccI CCATC 3 cut(s) 160, 161, 435
BceAI ACGGC 1 cut(s) 552
BcgI CGANNNNNNTGC 6 cut(s) 7, 41, 194, 228, 1210, 1244
BciT130I CCWGG 3 cut(s) 321, 465, 531
BclI TGATCA 1 cut(s) 784
BfaI CTAG 2 cut(s) 29, 1169
BfmI CTRYAG 2 cut(s) 827, 1314
BfoI RGCGCY 1 cut(s) 703
BfrI CTTAAG 1 cut(s) 656
BisI GCNGC 3 cut(s) 258, 827, 1205
BlsI GCNGC 3 cut(s) 259, 828, 1206
Bme1390I CCNGG 3 cut(s) 321, 465, 531
Bme18I GGWCC 3 cut(s) 460, 527, 1377
BmeT110I CYCGRG 1 cut(s) 390
BmgT120I GGNCC 3 cut(s) 460, 527, 1377
BmiI GGNNCC 6 cut(s) 462, 639, 663, 701, 1002, 1379
BmrFI CCNGG 3 cut(s) 321, 465, 531
BmrI ACTGGG 1 cut(s) 1367
BmsI GCATC 3 cut(s) 479, 773, 1099
BmuI ACTGGG 1 cut(s) 1367
BpiI GAAGAC 1 cut(s) 132
BpmI CTGGAG 1 cut(s) 287
Bpu10I CCTNAGC 2 cut(s) 587, 974
BsaBI GATNNNNATC 1 cut(s) 426
BsaHI GRCGYC 2 cut(s) 535, 700
BsaJI CCNNGG 7 cut(s) 12, 63, 352, 463, 464, 530, 927
Bsc4I CCNNNNNNNGG 5 cut(s) 231, 307, 358, 814, 1136
Bse1I ACTGG 5 cut(s) 477, 1155, 1296, 1320, 1362
Bse3DI GCAATG 2 cut(s) 129, 1288
Bse8I GATNNNNATC 1 cut(s) 426
BseBI CCWGG 3 cut(s) 321, 465, 531
BseDI CCNNGG 7 cut(s) 12, 63, 352, 463, 464, 530, 927
BseGI GGATG 8 cut(s) 48, 176, 367, 427, 764, 1090, 1216, 1353
BseJI GATNNNNATC 1 cut(s) 426
BseLI CCNNNNNNNGG 5 cut(s) 231, 307, 358, 814, 1136
BseMI GCAATG 2 cut(s) 129, 1288
BseMII CTCAG 1 cut(s) 804
BseNI ACTGG 5 cut(s) 477, 1155, 1296, 1320, 1362
BseRI GAGGAG 1 cut(s) 1239
BseSI GKGCMC 2 cut(s) 799, 903
BseXI GCAGC 3 cut(s) 269, 813, 1191
BsgI GTGCAG 2 cut(s) 941, 1190
BshFI GGCC 2 cut(s) 11, 851
BshNI GGYRCC 1 cut(s) 699
BsiHKAI GWGCWC 1 cut(s) 799
BsiHKCI CYCGRG 1 cut(s) 390
BslFI GGGAC 2 cut(s) 446, 1363
BslI CCNNNNNNNGG 5 cut(s) 231, 307, 358, 814, 1136
BsmFI GGGAC 2 cut(s) 446, 1363
BsnI GGCC 2 cut(s) 11, 851
BsoBI CYCGRG 1 cut(s) 390
Bsp1286I GDGCHC 3 cut(s) 642, 799, 903
Bsp143I GATC 3 cut(s) 381, 784, 1037
Bsp19I CCATGG 2 cut(s) 12, 927
BspACI CCGC 1 cut(s) 642
BspANI GGCC 2 cut(s) 11, 851
BspCNI CTCAG 1 cut(s) 805
BspHI TCATGA 1 cut(s) 595
BspLI GGNNCC 6 cut(s) 462, 639, 663, 701, 1002, 1379
BspMAI CTGCAG 1 cut(s) 831
BspPI GGATC 2 cut(s) 389, 1045
BspT107I GGYRCC 1 cut(s) 699
BspTI CTTAAG 1 cut(s) 656
BsrDI GCAATG 2 cut(s) 129, 1288
BsrI ACTGG 5 cut(s) 477, 1155, 1296, 1320, 1362
BssECI CCNNGG 7 cut(s) 12, 63, 352, 463, 464, 530, 927
BssMI GATC 3 cut(s) 381, 784, 1037
BssNI GRCGYC 2 cut(s) 535, 700
BssSI CACGAG 1 cut(s) 194
BssT1I CCWWGG 4 cut(s) 12, 63, 352, 927
Bst2BI CACGAG 1 cut(s) 194
Bst2UI CCWGG 3 cut(s) 321, 465, 531
Bst4CI ACNGT 6 cut(s) 116, 997, 1068, 1123, 1163, 1338
Bst6I CTCTTC 1 cut(s) 1094
BstACI GRCGYC 2 cut(s) 535, 700
BstAFI CTTAAG 1 cut(s) 656
BstAPI GCANNNNNTGC 2 cut(s) 1195, 1204
BstC8I GCNNGC 3 cut(s) 642, 936, 1016
BstDEI CTNAG 3 cut(s) 587, 813, 974
BstDSI CCRYGG 2 cut(s) 12, 927
BstF5I GGATG 8 cut(s) 48, 176, 367, 427, 764, 1090, 1216, 1353
BstH2I RGCGCY 1 cut(s) 703
BstHHI GCGC 1 cut(s) 702
BstKTI GATC 3 cut(s) 384, 787, 1040
BstMBI GATC 3 cut(s) 381, 784, 1037
BstMWI GCNNNNNNNGC 5 cut(s) 449, 706, 944, 1195, 1204
BstNI CCWGG 3 cut(s) 321, 465, 531
BstNSI RCATGY 1 cut(s) 989
BstSCI CCNGG 3 cut(s) 319, 463, 529
BstSFI CTRYAG 2 cut(s) 827, 1314
BstSLI GKGCMC 2 cut(s) 799, 903
BstV1I GCAGC 3 cut(s) 269, 813, 1191
BstV2I GAAGAC 1 cut(s) 132
BstX2I RGATCY 1 cut(s) 1037
BstXI CCANNNNNNTGG 1 cut(s) 484
BstYI RGATCY 1 cut(s) 1037
BsuRI GGCC 2 cut(s) 11, 851
BtgI CCRYGG 2 cut(s) 12, 927
BtsCI GGATG 8 cut(s) 48, 176, 367, 427, 764, 1090, 1216, 1353
BtsI GCAGTG 1 cut(s) 836
BtsIMutI CAGTG 4 cut(s) 121, 484, 836, 1355
Cac8I GCNNGC 3 cut(s) 642, 936, 1016
CaiI CAGNNNCTG 1 cut(s) 995
CciI TCATGA 1 cut(s) 595
CfoI GCGC 1 cut(s) 702
Cfr13I GGNCC 3 cut(s) 460, 527, 1377
CseI GACGC 1 cut(s) 524
Csp6I GTAC 4 cut(s) 149, 174, 554, 1159
CviAII CATG 8 cut(s) 13, 206, 496, 596, 928, 986, 1011, 1262
CviQI GTAC 4 cut(s) 149, 174, 554, 1159
DdeI CTNAG 3 cut(s) 587, 813, 974
DinI GGCGCC 1 cut(s) 701
DpnI GATC 3 cut(s) 383, 786, 1039
DpnII GATC 3 cut(s) 381, 784, 1037
DraIII CACNNNGTG 1 cut(s) 1195
DrdI GACNNNNNNGTC 1 cut(s) 534
DseDI GACNNNNNNGTC 1 cut(s) 534
EaeI YGGCCR 1 cut(s) 9
Eam1104I CTCTTC 1 cut(s) 1094
EarI CTCTTC 1 cut(s) 1094
Eco130I CCWWGG 4 cut(s) 12, 63, 352, 927
Eco147I AGGCCT 1 cut(s) 851
Eco24I GRGCYC 1 cut(s) 642
Eco47I GGWCC 3 cut(s) 460, 527, 1377
Eco57I CTGAAG 1 cut(s) 969
Eco88I CYCGRG 1 cut(s) 390
EcoO109I RGGNCCY 2 cut(s) 460, 1377
EcoRII CCWGG 3 cut(s) 319, 463, 529
EcoT14I CCWWGG 4 cut(s) 12, 63, 352, 927
EcoT38I GRGCYC 1 cut(s) 642
EgeI GGCGCC 1 cut(s) 701
EheI GGCGCC 1 cut(s) 701
ErhI CCWWGG 4 cut(s) 12, 63, 352, 927
FaeI CATG 8 cut(s) 16, 209, 499, 599, 931, 989, 1014, 1265
FalI AAGNNNNNCTT 2 cut(s) 507, 539
FaqI GGGAC 2 cut(s) 446, 1363
FatI CATG 8 cut(s) 12, 205, 495, 595, 927, 985, 1010, 1261
FauI CCCGC 1 cut(s) 649
FbaI TGATCA 1 cut(s) 784
Fnu4HI GCNGC 3 cut(s) 258, 827, 1205
FokI GGATG 8 cut(s) 35, 183, 374, 414, 751, 1077, 1203, 1360
FriOI GRGCYC 1 cut(s) 642
Fsp4HI GCNGC 3 cut(s) 258, 827, 1205
FspBI CTAG 2 cut(s) 29, 1169
GlaI GCGC 1 cut(s) 701
GluI GCNGC 3 cut(s) 258, 827, 1205
GsuI CTGGAG 1 cut(s) 287
HaeII RGCGCY 1 cut(s) 703
HaeIII GGCC 2 cut(s) 11, 851
HgaI GACGC 1 cut(s) 524
HhaI GCGC 1 cut(s) 702
Hin1I GRCGYC 2 cut(s) 535, 700
Hin1II CATG 8 cut(s) 16, 209, 499, 599, 931, 989, 1014, 1265
Hin6I GCGC 1 cut(s) 700
HinP1I GCGC 1 cut(s) 700
HindIII AAGCTT 3 cut(s) 72, 653, 789
HinfI GANTC 4 cut(s) 160, 388, 712, 1222
HphI GGTGA 1 cut(s) 1379
Hpy166II GTNNAC 2 cut(s) 797, 834
Hpy188I TCNGA 2 cut(s) 814, 1221
Hpy188III TCNNGA 8 cut(s) 108, 164, 266, 385, 431, 596, 635, 1031
Hpy8I GTNNAC 2 cut(s) 797, 834
HpyAV CCTTC 3 cut(s) 690, 718, 819
HpyCH4III ACNGT 6 cut(s) 116, 997, 1068, 1123, 1163, 1338
HpyF10VI GCNNNNNNNGC 5 cut(s) 449, 706, 944, 1195, 1204
HpyF3I CTNAG 3 cut(s) 587, 813, 974
Hsp92I GRCGYC 2 cut(s) 535, 700
Hsp92II CATG 8 cut(s) 16, 209, 499, 599, 931, 989, 1014, 1265
HspAI GCGC 1 cut(s) 700
KasI GGCGCC 1 cut(s) 699
Ksp22I TGATCA 1 cut(s) 784
Kzo9I GATC 3 cut(s) 381, 784, 1037
LmnI GCTCC 3 cut(s) 637, 931, 1252
Lsp1109I GCAGC 3 cut(s) 269, 813, 1191
LweI GCATC 3 cut(s) 479, 773, 1099
MaeI CTAG 2 cut(s) 29, 1169
MaeIII GTNAC 1 cut(s) 1123
MalI GATC 3 cut(s) 383, 786, 1039
MboI GATC 3 cut(s) 381, 784, 1037
MboII GAAGA 7 cut(s) 137, 169, 302, 923, 962, 965, 1111
MflI RGATCY 1 cut(s) 1037
MhlI GDGCHC 3 cut(s) 642, 799, 903
MluCI AATT 8 cut(s) 341, 345, 406, 678, 1043, 1105, 1270, 1388
Mly113I GGCGCC 1 cut(s) 700
MlyI GAGTC 1 cut(s) 382
MmeI TCCRAC 2 cut(s) 225, 1325
MnlI CCTC 8 cut(s) 262, 352, 808, 841, 1053, 1092, 1104, 1260
MroXI GAANNNNTTC 1 cut(s) 315
MslI CAYNNNNRTG 3 cut(s) 57, 432, 1009
MspA1I CMGCKG 1 cut(s) 644
MspCI CTTAAG 1 cut(s) 656
MspR9I CCNGG 3 cut(s) 321, 465, 531
MvaI CCWGG 3 cut(s) 321, 465, 531
MwoI GCNNNNNNNGC 5 cut(s) 449, 706, 944, 1195, 1204
NarI GGCGCC 1 cut(s) 700
NcoI CCATGG 2 cut(s) 12, 927
NdeII GATC 3 cut(s) 381, 784, 1037
NlaIII CATG 8 cut(s) 16, 209, 499, 599, 931, 989, 1014, 1265
NlaIV GGNNCC 6 cut(s) 462, 639, 663, 701, 1002, 1379
NmuCI GTSAC 1 cut(s) 1123
NspI RCATGY 1 cut(s) 989
PaeR7I CTCGAG 1 cut(s) 390
PagI TCATGA 1 cut(s) 595
PasI CCCWGGG 1 cut(s) 464
PceI AGGCCT 1 cut(s) 851
PcsI WCGNNNNNNNCGW 1 cut(s) 14
PdmI GAANNNNTTC 1 cut(s) 315
PfeI GAWTC 3 cut(s) 160, 712, 1222
PkrI GCNGC 3 cut(s) 259, 828, 1206
PleI GAGTC 1 cut(s) 382
PluTI GGCGCC 1 cut(s) 703
PpsI GAGTC 1 cut(s) 382
PpuMI RGGWCCY 2 cut(s) 460, 1377
PshBI ATTAAT 1 cut(s) 344
Psp5II RGGWCCY 2 cut(s) 460, 1377
Psp6I CCWGG 3 cut(s) 319, 463, 529
PspGI CCWGG 3 cut(s) 319, 463, 529
PspN4I GGNNCC 6 cut(s) 462, 639, 663, 701, 1002, 1379
PspPI GGNCC 3 cut(s) 460, 527, 1377
PspPPI RGGWCCY 2 cut(s) 460, 1377
PspXI VCTCGAGB 1 cut(s) 390
PstI CTGCAG 1 cut(s) 831
PstNI CAGNNNCTG 1 cut(s) 995
PsuI RGATCY 1 cut(s) 1037
RsaI GTAC 4 cut(s) 150, 175, 555, 1160
RsaNI GTAC 4 cut(s) 149, 174, 554, 1159
RseI CAYNNNNRTG 3 cut(s) 57, 432, 1009
SatI GCNGC 3 cut(s) 258, 827, 1205
Sau3AI GATC 3 cut(s) 381, 784, 1037
Sau96I GGNCC 3 cut(s) 460, 527, 1377
SchI GAGTC 1 cut(s) 382
ScrFI CCNGG 3 cut(s) 321, 465, 531
SduI GDGCHC 3 cut(s) 642, 799, 903
SfaNI GCATC 3 cut(s) 479, 773, 1099
SfcI CTRYAG 2 cut(s) 827, 1314
SfoI GGCGCC 1 cut(s) 701
Sfr274I CTCGAG 1 cut(s) 390
SinI GGWCC 3 cut(s) 460, 527, 1377
SlaI CTCGAG 1 cut(s) 390
SmiMI CAYNNNNRTG 3 cut(s) 57, 432, 1009
SmlI CTYRAG 2 cut(s) 390, 656
SmoI CTYRAG 2 cut(s) 390, 656
Sse9I AATT 8 cut(s) 341, 345, 406, 678, 1043, 1105, 1270, 1388
SseBI AGGCCT 1 cut(s) 851
SsiI CCGC 1 cut(s) 642
SspDI GGCGCC 1 cut(s) 699
SspMI CTAG 2 cut(s) 29, 1169
StuI AGGCCT 1 cut(s) 851
StyD4I CCNGG 3 cut(s) 319, 463, 529
StyI CCWWGG 4 cut(s) 12, 63, 352, 927
TaaI ACNGT 6 cut(s) 116, 997, 1068, 1123, 1163, 1338
TaqI TCGA 3 cut(s) 155, 391, 541
TasI AATT 8 cut(s) 341, 345, 406, 678, 1043, 1105, 1270, 1388
TatI WGTACW 2 cut(s) 173, 1158
TfiI GAWTC 3 cut(s) 160, 712, 1222
TscAI CASTG 4 cut(s) 121, 484, 836, 1362
TseFI GTSAC 1 cut(s) 1123
TseI GCWGC 3 cut(s) 257, 826, 1204
Tsp45I GTSAC 1 cut(s) 1123
TspGWI ACGGA 3 cut(s) 247, 1050, 1331
TspRI CASTG 4 cut(s) 121, 484, 836, 1362
Vha464I CTTAAG 1 cut(s) 656
VneI GTGCAC 1 cut(s) 795
VpaK11BI GGWCC 3 cut(s) 460, 527, 1377
VspI ATTAAT 1 cut(s) 344
XapI RAATTY 2 cut(s) 406, 1043
XceI RCATGY 1 cut(s) 989
XhoI CTCGAG 1 cut(s) 390
XmnI GAANNNNTTC 1 cut(s) 315
XspI CTAG 2 cut(s) 29, 1169
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.