Prupe.6G141700_v2.0.a1

protein serine/threonine kinase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
N/A
Physical Location & Seq
Reverse (-)
11491607 .. 11491999
393 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G141700.1_v2.0.a1.CDS.1

Sequence Viewer

Length: 393 bp
ATGGCGCCACCTCCACGGCAAGGTCGTCATGGTCACCGGCGCTACGTTCTTGAGCTCTGTGATGCACCCGATCTCCACCGCCGAGTCACTCTAGGAGACTTCTCCGAGCCCGAGGCAGCCTCGGTCATGGCTCAGCTCATGCTCGCCGTTGCGCACTGCCTCCGCCTCGACGTGGCTCACCGGGACATCAAGTCGGACAACACCTTGTTCGACGGTCGGGACCGGCTCTGGATCGCCGATTTCGGATCGGCCGAGACGTTCGGGGATGGCCAATCCTCCATCGAGCTCATCAAATCCGCTAAGGTGTTCCACTATGGATCCATAAGCTTGATTGTGGAGCCATGCAGATCAGCCCATCTAAAAGTTTTCCAAGGGAGCTACAGATCCAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PP2C Pkinase

Protein Analysis

131

Amino Acids

14.55

Weight (kDa)

7.82

Isoelectric Point (pI)

47.2

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 153
AccB1I GGYRCC 1 cut(s) 4
AciI CCGC 3 cut(s) 79, 163, 297
AclWI GGATC 5 cut(s) 239, 253, 312, 325, 378
AcoI YGGCCR 2 cut(s) 249, 268
AcyI GRCGYC 1 cut(s) 5
AfiI CCNNNNNNNGG 2 cut(s) 20, 172
AhdI GACNNNNNGTC 1 cut(s) 190
AjiI CACGTC 1 cut(s) 172
AluBI AGCT 5 cut(s) 55, 136, 286, 327, 378
AluI AGCT 5 cut(s) 55, 136, 286, 327, 378
Alw21I GWGCWC 2 cut(s) 57, 288
Alw26I GTCTC 2 cut(s) 90, 248
AlwI GGATC 5 cut(s) 239, 253, 312, 325, 378
Ama87I CYCGRG 1 cut(s) 110
AoxI GGCC 2 cut(s) 249, 268
ApeKI GCWGC 1 cut(s) 116
AspLEI GCGC 3 cut(s) 7, 42, 154
AspS9I GGNCC 1 cut(s) 220
AsuC2I CCSGG 1 cut(s) 182
AsuHPI GGTGA 2 cut(s) 26, 170
AvaI CYCGRG 1 cut(s) 110
AvaII GGWCC 1 cut(s) 220
BalI TGGCCA 1 cut(s) 270
BamHI GGATCC 1 cut(s) 317
BanI GGYRCC 1 cut(s) 4
BanII GRGCYC 3 cut(s) 57, 111, 288
Bbv12I GWGCWC 2 cut(s) 57, 288
BbvI GCAGC 1 cut(s) 128
BccI CCATC 3 cut(s) 260, 287, 363
BceAI ACGGC 2 cut(s) 32, 131
BcnI CCSGG 1 cut(s) 182
BcoDI GTCTC 2 cut(s) 90, 248
BfaI CTAG 1 cut(s) 92
BfmI CTRYAG 1 cut(s) 379
BfoI RGCGCY 2 cut(s) 8, 43
BisI GCNGC 1 cut(s) 117
BlpI GCTNAGC 1 cut(s) 132
BlsI GCNGC 1 cut(s) 118
Bme1390I CCNGG 1 cut(s) 182
Bme18I GGWCC 1 cut(s) 220
BmeRI GACNNNNNGTC 1 cut(s) 190
BmeT110I CYCGRG 1 cut(s) 110
BmgBI CACGTC 1 cut(s) 172
BmgT120I GGNCC 1 cut(s) 220
BmiI GGNNCC 4 cut(s) 6, 221, 319, 339
BmrFI CCNGG 1 cut(s) 182
BmsI GCATC 1 cut(s) 52
BplI GAGNNNNNCTC 2 cut(s) 104, 136
Bpu10I CCTNAGC 1 cut(s) 300
Bpu1102I GCTNAGC 1 cut(s) 132
BpuEI CTTGAG 1 cut(s) 71
BpuMI CCSGG 1 cut(s) 182
BsaHI GRCGYC 1 cut(s) 5
BsaJI CCNNGG 4 cut(s) 14, 111, 120, 370
BsaXI ACNNNNNCTCC 2 cut(s) 57, 87
Bsc4I CCNNNNNNNGG 2 cut(s) 20, 172
Bse118I RCCGGY 2 cut(s) 36, 222
BseDI CCNNGG 4 cut(s) 14, 111, 120, 370
BseGI GGATG 1 cut(s) 271
BseLI CCNNNNNNNGG 2 cut(s) 20, 172
BseMII CTCAG 1 cut(s) 146
BseX3I CGGCCG 1 cut(s) 249
BseXI GCAGC 1 cut(s) 128
Bsh1285I CGRYCG 2 cut(s) 217, 252
BshFI GGCC 2 cut(s) 251, 270
BshNI GGYRCC 1 cut(s) 4
BsiEI CGRYCG 2 cut(s) 217, 252
BsiHKAI GWGCWC 2 cut(s) 57, 288
BsiHKCI CYCGRG 1 cut(s) 110
BsiSI CCGG 3 cut(s) 37, 181, 223
BslFI GGGAC 2 cut(s) 197, 233
BslI CCNNNNNNNGG 2 cut(s) 20, 172
BsmAI GTCTC 2 cut(s) 90, 248
BsmBI CGTCTC 1 cut(s) 248
BsmFI GGGAC 2 cut(s) 197, 233
BsnI GGCC 2 cut(s) 251, 270
BsoBI CYCGRG 1 cut(s) 110
Bsp1286I GDGCHC 3 cut(s) 57, 111, 288
Bsp143I GATC 6 cut(s) 70, 231, 245, 317, 347, 383
Bsp1720I GCTNAGC 1 cut(s) 132
BspACI CCGC 3 cut(s) 79, 163, 297
BspANI GGCC 2 cut(s) 251, 270
BspCNI CTCAG 1 cut(s) 145
BspLI GGNNCC 4 cut(s) 6, 221, 319, 339
BspPI GGATC 5 cut(s) 239, 253, 312, 325, 378
BspT107I GGYRCC 1 cut(s) 4
BsrFI RCCGGY 2 cut(s) 36, 222
BssAI RCCGGY 2 cut(s) 36, 222
BssECI CCNNGG 4 cut(s) 14, 111, 120, 370
BssMI GATC 6 cut(s) 70, 231, 245, 317, 347, 383
BssNI GRCGYC 1 cut(s) 5
BssT1I CCWWGG 1 cut(s) 370
Bst4CI ACNGT 1 cut(s) 215
BstACI GRCGYC 1 cut(s) 5
BstC8I GCNNGC 1 cut(s) 144
BstDEI CTNAG 2 cut(s) 132, 300
BstDSI CCRYGG 1 cut(s) 14
BstEII GGTNACC 1 cut(s) 32
BstF5I GGATG 1 cut(s) 271
BstH2I RGCGCY 2 cut(s) 8, 43
BstHHI GCGC 3 cut(s) 7, 42, 154
BstKTI GATC 6 cut(s) 73, 234, 248, 320, 350, 386
BstMAI GTCTC 2 cut(s) 90, 248
BstMBI GATC 6 cut(s) 70, 231, 245, 317, 347, 383
BstMCI CGRYCG 2 cut(s) 217, 252
BstPI GGTNACC 1 cut(s) 32
BstSCI CCNGG 1 cut(s) 180
BstSFI CTRYAG 1 cut(s) 379
BstV1I GCAGC 1 cut(s) 128
BstX2I RGATCY 2 cut(s) 317, 383
BstYI RGATCY 2 cut(s) 317, 383
BstZI CGGCCG 1 cut(s) 249
BsuRI GGCC 2 cut(s) 251, 270
BtgI CCRYGG 1 cut(s) 14
BtrI CACGTC 1 cut(s) 172
BtsCI GGATG 1 cut(s) 271
BtsI GCAGTG 1 cut(s) 154
BtsIMutI CAGTG 1 cut(s) 154
Cac8I GCNNGC 1 cut(s) 144
CfoI GCGC 3 cut(s) 7, 42, 154
Cfr10I RCCGGY 2 cut(s) 36, 222
Cfr13I GGNCC 1 cut(s) 220
CviAII CATG 4 cut(s) 29, 127, 139, 342
DdeI CTNAG 2 cut(s) 132, 300
DinI GGCGCC 1 cut(s) 6
DpnI GATC 6 cut(s) 72, 233, 247, 319, 349, 385
DpnII GATC 6 cut(s) 70, 231, 245, 317, 347, 383
DriI GACNNNNNGTC 1 cut(s) 190
EaeI YGGCCR 2 cut(s) 249, 268
EagI CGGCCG 1 cut(s) 249
Eam1105I GACNNNNNGTC 1 cut(s) 190
EciI GGCGGA 1 cut(s) 152
Ecl136II GAGCTC 2 cut(s) 55, 286
EclXI CGGCCG 1 cut(s) 249
Eco130I CCWWGG 1 cut(s) 370
Eco24I GRGCYC 3 cut(s) 57, 111, 288
Eco47I GGWCC 1 cut(s) 220
Eco52I CGGCCG 1 cut(s) 249
Eco53kI GAGCTC 2 cut(s) 55, 286
Eco88I CYCGRG 1 cut(s) 110
Eco91I GGTNACC 1 cut(s) 32
EcoICRI GAGCTC 2 cut(s) 55, 286
EcoO65I GGTNACC 1 cut(s) 32
EcoT14I CCWWGG 1 cut(s) 370
EcoT38I GRGCYC 3 cut(s) 57, 111, 288
EgeI GGCGCC 1 cut(s) 6
EheI GGCGCC 1 cut(s) 6
ErhI CCWWGG 1 cut(s) 370
Esp3I CGTCTC 1 cut(s) 248
FaeI CATG 4 cut(s) 32, 130, 142, 345
FaiI YATR 6 cut(s) 30, 128, 140, 315, 323, 343
FaqI GGGAC 2 cut(s) 197, 233
FatI CATG 4 cut(s) 28, 126, 138, 341
Fnu4HI GCNGC 1 cut(s) 117
FokI GGATG 1 cut(s) 278
FriOI GRGCYC 3 cut(s) 57, 111, 288
Fsp4HI GCNGC 1 cut(s) 117
FspBI CTAG 1 cut(s) 92
FspI TGCGCA 1 cut(s) 153
GlaI GCGC 3 cut(s) 6, 41, 153
GluI GCNGC 1 cut(s) 117
HaeII RGCGCY 2 cut(s) 8, 43
HaeIII GGCC 2 cut(s) 251, 270
HapII CCGG 3 cut(s) 37, 181, 223
HhaI GCGC 3 cut(s) 7, 42, 154
Hin1I GRCGYC 1 cut(s) 5
Hin1II CATG 4 cut(s) 32, 130, 142, 345
Hin6I GCGC 3 cut(s) 5, 40, 152
HinP1I GCGC 3 cut(s) 5, 40, 152
HindIII AAGCTT 1 cut(s) 325
HinfI GANTC 1 cut(s) 84
HpaII CCGG 3 cut(s) 37, 181, 223
HphI GGTGA 2 cut(s) 26, 170
Hpy188I TCNGA 3 cut(s) 106, 196, 245
Hpy188III TCNNGA 3 cut(s) 50, 218, 229
Hpy99I CGWCG 2 cut(s) 173, 215
HpyCH4III ACNGT 1 cut(s) 215
HpyCH4IV ACGT 3 cut(s) 45, 171, 257
HpyCH4V TGCA 2 cut(s) 65, 345
HpyF3I CTNAG 2 cut(s) 132, 300
HpySE526I ACGT 3 cut(s) 45, 171, 257
Hsp92I GRCGYC 1 cut(s) 5
Hsp92II CATG 4 cut(s) 32, 130, 142, 345
HspAI GCGC 3 cut(s) 5, 40, 152
KasI GGCGCC 1 cut(s) 4
Kzo9I GATC 6 cut(s) 70, 231, 245, 317, 347, 383
LmnI GCTCC 2 cut(s) 337, 375
LpnPI CCDG 4 cut(s) 50, 194, 214, 236
Lsp1109I GCAGC 1 cut(s) 128
LweI GCATC 1 cut(s) 52
MaeI CTAG 1 cut(s) 92
MaeII ACGT 3 cut(s) 45, 171, 257
MaeIII GTNAC 2 cut(s) 32, 85
MalI GATC 6 cut(s) 72, 233, 247, 319, 349, 385
MboI GATC 6 cut(s) 70, 231, 245, 317, 347, 383
MflI RGATCY 2 cut(s) 317, 383
MhlI GDGCHC 3 cut(s) 57, 111, 288
MlsI TGGCCA 1 cut(s) 270
MluNI TGGCCA 1 cut(s) 270
Mly113I GGCGCC 1 cut(s) 5
MlyI GAGTC 1 cut(s) 93
MmeI TCCRAC 1 cut(s) 174
MnlI CCTC 6 cut(s) 21, 106, 130, 170, 176, 286
Mox20I TGGCCA 1 cut(s) 270
MscI TGGCCA 1 cut(s) 270
Msp20I TGGCCA 1 cut(s) 270
MspI CCGG 3 cut(s) 37, 181, 223
MspR9I CCNGG 1 cut(s) 182
NarI GGCGCC 1 cut(s) 5
NciI CCSGG 1 cut(s) 182
NdeII GATC 6 cut(s) 70, 231, 245, 317, 347, 383
NlaIII CATG 4 cut(s) 32, 130, 142, 345
NlaIV GGNNCC 4 cut(s) 6, 221, 319, 339
NmeAIII GCCGAG 2 cut(s) 107, 277
NmuCI GTSAC 2 cut(s) 32, 85
NsbI TGCGCA 1 cut(s) 153
PcsI WCGNNNNNNNCGW 3 cut(s) 22, 249, 254
PkrI GCNGC 1 cut(s) 118
PleI GAGTC 1 cut(s) 92
PluTI GGCGCC 1 cut(s) 8
PpsI GAGTC 1 cut(s) 92
Psp124BI GAGCTC 2 cut(s) 57, 288
PspEI GGTNACC 1 cut(s) 32
PspN4I GGNNCC 4 cut(s) 6, 221, 319, 339
PspPI GGNCC 1 cut(s) 220
PsuI RGATCY 2 cut(s) 317, 383
SacI GAGCTC 2 cut(s) 57, 288
SatI GCNGC 1 cut(s) 117
Sau3AI GATC 6 cut(s) 70, 231, 245, 317, 347, 383
Sau96I GGNCC 1 cut(s) 220
SchI GAGTC 1 cut(s) 93
ScrFI CCNGG 1 cut(s) 182
SduI GDGCHC 3 cut(s) 57, 111, 288
SfaNI GCATC 1 cut(s) 52
SfcI CTRYAG 1 cut(s) 379
SfoI GGCGCC 1 cut(s) 6
SgrAI CRCCGGYG 1 cut(s) 36
SinI GGWCC 1 cut(s) 220
SmlI CTYRAG 1 cut(s) 50
SmoI CTYRAG 1 cut(s) 50
SsiI CCGC 3 cut(s) 79, 163, 297
SspDI GGCGCC 1 cut(s) 4
SspMI CTAG 1 cut(s) 92
SstI GAGCTC 2 cut(s) 57, 288
StyD4I CCNGG 1 cut(s) 180
StyI CCWWGG 1 cut(s) 370
TaaI ACNGT 1 cut(s) 215
TaiI ACGT 3 cut(s) 48, 174, 260
TaqI TCGA 3 cut(s) 168, 210, 282
TaqII GACCGA 1 cut(s) 112
TscAI CASTG 1 cut(s) 161
TseFI GTSAC 2 cut(s) 32, 85
TseI GCWGC 1 cut(s) 116
Tsp45I GTSAC 2 cut(s) 32, 85
TspRI CASTG 1 cut(s) 161
VpaK11BI GGWCC 1 cut(s) 220
XspI CTAG 1 cut(s) 92
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.