Prupe.6G144600_v2.0.a1

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Forward (+)
11783738 .. 11787034
3297 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G144600.1_v2.0.a1.CDS.5

Sequence Viewer

Length: 708 bp
ATGTTGCATCTGCTACAAACAACTTTTTTGAAGAAAACAAGCTTAGAATGGGGGTATGATGGTAACCTTCTAGGGTTACAAGAAGTGGATGTAAAAAGACTTTTGAGAAAGACTCACCGAGGTTTAAACGAGTTTAAGAATGAGATTAGTCTGATTGCTAAGTTACAACGCATGAATCTTCAAGCACAAATAGATTGGAGGAAACACTTCGAGATTATTGAAGAGATTTCAAGACGGGTCTTTTATCTCAATCGAGATCATAGACTTAGAAAAATTCCTCGAGATCTAAAATCTAGCAACATTTTGCTAGTTGGAGATATGATTCCTCAAATTTCAGAATTTGGTATATCAATAATATTCGGCGGGAGTCAAAATGAAGCATATACAACCCTGGTTGTTGGCACATATTATATGTCCCCTAAATATGCAATGGAAGATCTATTTTCTGTAAAGGCAGTCTACAGCTTTGCGGTAGAGCTGCTAGAGATTGGTAACCTTCTAGGGCTACAAGAAGTAGGTGTAAAAATACTTTCGAGAAGGATTGACCAAGGCTTGGAGAAGTTTAAGAGTGAGATTAGTTTGATTGCAAATATGGTATTGTATGTGCAAGACTCTCCAATTTCTAGACTAACAATGCCGTCCATGGTGTTAATGATGGAGAGTGAAACTACACTTCTTCAAGCCCAAAATCCCATATATAGGTTTTGA

Protein Analysis

236

Amino Acids

27.21

Weight (kDa)

8.98

Isoelectric Point (pI)

53.41

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0029007)

Species Orthologous Gene IDs
prunus_persica Prupe.6G144500_v2.0.a1 Prupe.6G144600_v2.0.a1

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 553
AccI GTMKAC 1 cut(s) 459
AciI CCGC 2 cut(s) 363, 470
AcsI RAATTY 3 cut(s) 273, 330, 338
AfiI CCNNNNNNNGG 2 cut(s) 553, 699
AgsI TTSAA 5 cut(s) 31, 182, 221, 231, 680
AjnI CCWGG 1 cut(s) 390
AluBI AGCT 3 cut(s) 42, 465, 478
AluI AGCT 3 cut(s) 42, 465, 478
Ama87I CYCGRG 1 cut(s) 279
ApeKI GCWGC 1 cut(s) 478
ApoI RAATTY 3 cut(s) 273, 330, 338
Asp700I GAANNNNTTC 1 cut(s) 206
AsuHPI GGTGA 1 cut(s) 107
AvaI CYCGRG 1 cut(s) 279
BbvI GCAGC 1 cut(s) 465
BccI CCATC 2 cut(s) 53, 649
BceAI ACGGC 1 cut(s) 622
BciT130I CCWGG 1 cut(s) 392
BfaI CTAG 6 cut(s) 71, 294, 308, 482, 500, 624
BfmI CTRYAG 1 cut(s) 460
BglII AGATCT 2 cut(s) 283, 436
BisI GCNGC 1 cut(s) 479
BlsI GCNGC 1 cut(s) 480
Bme1390I CCNGG 1 cut(s) 392
BmeT110I CYCGRG 1 cut(s) 279
BmrFI CCNGG 1 cut(s) 392
BmsI GCATC 1 cut(s) 16
BplI GAGNNNNNCTC 2 cut(s) 97, 129
BsaJI CCNNGG 4 cut(s) 118, 390, 547, 642
Bsc4I CCNNNNNNNGG 2 cut(s) 553, 699
Bse3DI GCAATG 1 cut(s) 435
BseBI CCWGG 1 cut(s) 392
BseDI CCNNGG 4 cut(s) 118, 390, 547, 642
BseGI GGATG 1 cut(s) 94
BseLI CCNNNNNNNGG 2 cut(s) 553, 699
BseMI GCAATG 1 cut(s) 435
BseXI GCAGC 1 cut(s) 465
BsiHKCI CYCGRG 1 cut(s) 279
BslFI GGGAC 1 cut(s) 400
BslI CCNNNNNNNGG 2 cut(s) 553, 699
BsmFI GGGAC 1 cut(s) 400
BsoBI CYCGRG 1 cut(s) 279
Bsp143I GATC 3 cut(s) 256, 283, 436
Bsp19I CCATGG 1 cut(s) 642
BspACI CCGC 2 cut(s) 363, 470
BsrDI GCAATG 1 cut(s) 435
BssECI CCNNGG 4 cut(s) 118, 390, 547, 642
BssMI GATC 3 cut(s) 256, 283, 436
BssT1I CCWWGG 2 cut(s) 547, 642
Bst2UI CCWGG 1 cut(s) 392
Bst6I CTCTTC 1 cut(s) 216
BstDEI CTNAG 3 cut(s) 43, 159, 266
BstDSI CCRYGG 1 cut(s) 642
BstEII GGTNACC 2 cut(s) 62, 491
BstF5I GGATG 1 cut(s) 94
BstKTI GATC 3 cut(s) 259, 286, 439
BstMBI GATC 3 cut(s) 256, 283, 436
BstNI CCWGG 1 cut(s) 392
BstPI GGTNACC 2 cut(s) 62, 491
BstSCI CCNGG 1 cut(s) 390
BstSFI CTRYAG 1 cut(s) 460
BstV1I GCAGC 1 cut(s) 465
BstX2I RGATCY 2 cut(s) 283, 436
BstYI RGATCY 2 cut(s) 283, 436
BtgI CCRYGG 1 cut(s) 642
BtsCI GGATG 1 cut(s) 94
CviAII CATG 2 cut(s) 172, 643
CviJI RGCY 6 cut(s) 42, 465, 478, 505, 552, 683
CviKI_1 RGCY 6 cut(s) 42, 465, 478, 505, 552, 683
DdeI CTNAG 3 cut(s) 43, 159, 266
DpnI GATC 3 cut(s) 258, 285, 438
DpnII GATC 3 cut(s) 256, 283, 436
DraI TTTAAA 1 cut(s) 126
Eam1104I CTCTTC 1 cut(s) 216
EarI CTCTTC 1 cut(s) 216
Eco130I CCWWGG 2 cut(s) 547, 642
Eco88I CYCGRG 1 cut(s) 279
Eco91I GGTNACC 2 cut(s) 62, 491
EcoO65I GGTNACC 2 cut(s) 62, 491
EcoRII CCWGG 1 cut(s) 390
EcoT14I CCWWGG 2 cut(s) 547, 642
ErhI CCWWGG 2 cut(s) 547, 642
FaeI CATG 2 cut(s) 175, 646
FaqI GGGAC 1 cut(s) 400
FatI CATG 2 cut(s) 171, 642
FauI CCCGC 1 cut(s) 356
FblI GTMKAC 1 cut(s) 459
Fnu4HI GCNGC 1 cut(s) 479
FokI GGATG 1 cut(s) 101
Fsp4HI GCNGC 1 cut(s) 479
FspBI CTAG 6 cut(s) 71, 294, 308, 482, 500, 624
GluI GCNGC 1 cut(s) 479
Hin1II CATG 2 cut(s) 175, 646
HindIII AAGCTT 1 cut(s) 40
HinfI GANTC 5 cut(s) 112, 175, 322, 367, 611
HphI GGTGA 1 cut(s) 107
Hpy166II GTNNAC 1 cut(s) 460
Hpy188I TCNGA 2 cut(s) 153, 337
Hpy188III TCNNGA 6 cut(s) 211, 231, 254, 281, 534, 624
Hpy8I GTNNAC 1 cut(s) 460
HpyAV CCTTC 3 cut(s) 77, 506, 531
HpyCH4V TGCA 4 cut(s) 7, 428, 587, 607
HpyF3I CTNAG 3 cut(s) 43, 159, 266
Hsp92II CATG 2 cut(s) 175, 646
Kzo9I GATC 3 cut(s) 256, 283, 436
LpnPI CCDG 2 cut(s) 377, 404
Lsp1109I GCAGC 1 cut(s) 465
LweI GCATC 1 cut(s) 16
MaeI CTAG 6 cut(s) 71, 294, 308, 482, 500, 624
MaeIII GTNAC 4 cut(s) 62, 75, 162, 491
MalI GATC 3 cut(s) 258, 285, 438
MboI GATC 3 cut(s) 256, 283, 436
MboII GAAGA 5 cut(s) 43, 170, 233, 446, 668
MflI RGATCY 2 cut(s) 283, 436
MluCI AATT 4 cut(s) 273, 330, 338, 618
MlyI GAGTC 3 cut(s) 106, 376, 605
MmeI TCCRAC 1 cut(s) 292
MnlI CCTC 4 cut(s) 113, 192, 288, 336
MroXI GAANNNNTTC 1 cut(s) 206
MseI TTAA 4 cut(s) 125, 135, 564, 650
MspR9I CCNGG 1 cut(s) 392
MssI GTTTAAAC 1 cut(s) 126
MvaI CCWGG 1 cut(s) 392
NcoI CCATGG 1 cut(s) 642
NdeII GATC 3 cut(s) 256, 283, 436
NlaIII CATG 2 cut(s) 175, 646
PaeR7I CTCGAG 1 cut(s) 279
PdmI GAANNNNTTC 1 cut(s) 206
PfeI GAWTC 2 cut(s) 175, 322
PflMI CCANNNNNTGG 1 cut(s) 553
PkrI GCNGC 1 cut(s) 480
PleI GAGTC 3 cut(s) 106, 375, 605
PmeI GTTTAAAC 1 cut(s) 126
PpsI GAGTC 3 cut(s) 106, 375, 605
Psp6I CCWGG 1 cut(s) 390
PspEI GGTNACC 2 cut(s) 62, 491
PspGI CCWGG 1 cut(s) 390
PsuI RGATCY 2 cut(s) 283, 436
SaqAI TTAA 4 cut(s) 125, 135, 564, 650
SatI GCNGC 1 cut(s) 479
Sau3AI GATC 3 cut(s) 256, 283, 436
SchI GAGTC 3 cut(s) 106, 376, 605
ScrFI CCNGG 1 cut(s) 392
SetI ASST 8 cut(s) 44, 69, 124, 467, 480, 498, 520, 704
SfaNI GCATC 1 cut(s) 16
SfcI CTRYAG 1 cut(s) 460
Sfr274I CTCGAG 1 cut(s) 279
SlaI CTCGAG 1 cut(s) 279
SmlI CTYRAG 1 cut(s) 279
SmoI CTYRAG 1 cut(s) 279
Sse9I AATT 4 cut(s) 273, 330, 338, 618
SsiI CCGC 2 cut(s) 363, 470
SspI AATATT 1 cut(s) 357
SspMI CTAG 6 cut(s) 71, 294, 308, 482, 500, 624
StyD4I CCNGG 1 cut(s) 390
StyI CCWWGG 2 cut(s) 547, 642
TaqI TCGA 4 cut(s) 210, 253, 280, 533
TasI AATT 4 cut(s) 273, 330, 338, 618
TfiI GAWTC 2 cut(s) 175, 322
Tru1I TTAA 4 cut(s) 125, 135, 564, 650
Tru9I TTAA 4 cut(s) 125, 135, 564, 650
TseI GCWGC 1 cut(s) 478
TspDTI ATGAA 2 cut(s) 188, 390
Van91I CCANNNNNTGG 1 cut(s) 553
XapI RAATTY 3 cut(s) 273, 330, 338
XbaI TCTAGA 1 cut(s) 623
XhoI CTCGAG 1 cut(s) 279
XmiI GTMKAC 1 cut(s) 459
XmnI GAANNNNTTC 1 cut(s) 206
XspI CTAG 6 cut(s) 71, 294, 308, 482, 500, 624
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.