Prupe.6G152200_v2.0.a1

Major allergen Pru

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
N/A
Physical Location & Seq
Reverse (-)
13208800 .. 13209141
342 bp
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UTR
Exon/CDS
Intron
Prupe.6G152200.1_v2.0.a1.CDS.1

Sequence Viewer

Length: 342 bp
ATGGCGTCGAACGGGAACGGAGAGTCCACCTCAGTCATCCCCCCACCAAGATTGTTCAAAGCCCTTGTTCTTGAATCTGACGCCTTCATCCCCAAGATTGCTCCCCAATCAGTGAAAAGTGCTGAAATTGTTGAAGGAGATGGAGGTGTTGGAACCATCAAGAAGATTAGCTTTGATGAAGGAAGTCATTACAGCTATGTGAAGCACCGGATCGACGGGCTTGACGAAGATAACTTTGTGTACAGCTACACTTTGGTTGAAGGAGATGCTCTTTCAGACAAGGTTGAGAAAATCAGTTATGAGATTAAGTTGTGGCATCTGCTGATGGAGGTTCCATCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

114

Amino Acids

12.42

Weight (kDa)

4.82

Isoelectric Point (pI)

25.13

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 218
AcyI GRCGYC 2 cut(s) 5, 81
AfaI GTAC 1 cut(s) 242
AgsI TTSAA 4 cut(s) 58, 74, 134, 260
AloI GAACNNNNNNTCC 2 cut(s) 8, 40
AluBI AGCT 3 cut(s) 171, 195, 246
AluI AGCT 3 cut(s) 171, 195, 246
AlwI GGATC 1 cut(s) 218
BccI CCATC 3 cut(s) 134, 164, 319
BmiI GGNNCC 2 cut(s) 154, 333
BmsI GCATC 2 cut(s) 256, 325
BplI GAGNNNNNCTC 2 cut(s) 14, 46
BsaHI GRCGYC 2 cut(s) 5, 81
BsaWI WCCGGW 1 cut(s) 207
BseGI GGATG 2 cut(s) 36, 87
BseMII CTCAG 1 cut(s) 45
BsiSI CCGG 1 cut(s) 208
Bsp1407I TGTACA 1 cut(s) 240
Bsp143I GATC 1 cut(s) 210
BspCNI CTCAG 1 cut(s) 44
BspLI GGNNCC 2 cut(s) 154, 333
BspPI GGATC 1 cut(s) 218
BsrGI TGTACA 1 cut(s) 240
BssMI GATC 1 cut(s) 210
BssNI GRCGYC 2 cut(s) 5, 81
BstACI GRCGYC 2 cut(s) 5, 81
BstAUI TGTACA 1 cut(s) 240
BstDEI CTNAG 1 cut(s) 31
BstF5I GGATG 2 cut(s) 36, 87
BstKTI GATC 1 cut(s) 213
BstMBI GATC 1 cut(s) 210
BtsCI GGATG 2 cut(s) 36, 87
BtsIMutI CAGTG 1 cut(s) 117
CseI GACGC 1 cut(s) 89
Csp6I GTAC 1 cut(s) 241
CspCI CAANNNNNGTGG 2 cut(s) 33, 68
CviJI RGCY 5 cut(s) 62, 171, 195, 220, 246
CviKI_1 RGCY 5 cut(s) 62, 171, 195, 220, 246
CviQI GTAC 1 cut(s) 241
DdeI CTNAG 1 cut(s) 31
DpnI GATC 1 cut(s) 212
DpnII GATC 1 cut(s) 210
FaiI YATR 3 cut(s) 198, 300, 340
FalI AAGNNNNNCTT 2 cut(s) 155, 187
FokI GGATG 2 cut(s) 23, 74
HapII CCGG 1 cut(s) 208
HgaI GACGC 1 cut(s) 89
Hin1I GRCGYC 2 cut(s) 5, 81
HinfI GANTC 2 cut(s) 23, 74
HpaII CCGG 1 cut(s) 208
Hpy166II GTNNAC 2 cut(s) 27, 241
Hpy188I TCNGA 2 cut(s) 79, 277
Hpy188III TCNNGA 2 cut(s) 71, 160
Hpy8I GTNNAC 2 cut(s) 27, 241
Hpy99I CGWCG 2 cut(s) 10, 218
HpyAV CCTTC 4 cut(s) 94, 128, 173, 254
HpyF3I CTNAG 1 cut(s) 31
Hsp92I GRCGYC 2 cut(s) 5, 81
Kzo9I GATC 1 cut(s) 210
LmnI GCTCC 1 cut(s) 106
LpnPI CCDG 1 cut(s) 221
LweI GCATC 2 cut(s) 256, 325
MalI GATC 1 cut(s) 212
MboI GATC 1 cut(s) 210
MboII GAAGA 2 cut(s) 175, 239
MluCI AATT 1 cut(s) 126
MlyI GAGTC 1 cut(s) 32
MmeI TCCRAC 1 cut(s) 130
MnlI CCTC 3 cut(s) 40, 137, 322
MseI TTAA 1 cut(s) 306
MspI CCGG 1 cut(s) 208
NdeII GATC 1 cut(s) 210
NlaIV GGNNCC 2 cut(s) 154, 333
PcsI WCGNNNNNNNCGW 1 cut(s) 222
PfeI GAWTC 1 cut(s) 74
PleI GAGTC 1 cut(s) 31
PpsI GAGTC 1 cut(s) 31
PspN4I GGNNCC 2 cut(s) 154, 333
RsaI GTAC 1 cut(s) 242
RsaNI GTAC 1 cut(s) 241
SaqAI TTAA 1 cut(s) 306
Sau3AI GATC 1 cut(s) 210
SchI GAGTC 1 cut(s) 32
SetI ASST 7 cut(s) 32, 148, 173, 197, 248, 285, 333
SfaNI GCATC 2 cut(s) 256, 325
Sse9I AATT 1 cut(s) 126
TaqI TCGA 2 cut(s) 8, 213
TasI AATT 1 cut(s) 126
TatI WGTACW 1 cut(s) 240
TfiI GAWTC 1 cut(s) 74
Tru1I TTAA 1 cut(s) 306
Tru9I TTAA 1 cut(s) 306
TscAI CASTG 1 cut(s) 117
TspDTI ATGAA 2 cut(s) 76, 192
TspGWI ACGGA 1 cut(s) 33
TspRI CASTG 1 cut(s) 117
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.