Prupe.6G160600_v2.0.a1

regulation of endocannabinoid signaling pathway

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
N/A
Physical Location & Seq
Reverse (-)
14871452 .. 14873092
1641 bp
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UTR
Exon/CDS
Intron
Prupe.6G160600.1_v2.0.a1.CDS.1

Sequence Viewer

Length: 333 bp
ATGAGCAGGTTGGGCGGTGCAGCTGCTGTTGCTCCTCTTGTTGCTGATGTGTCCTCTGAGGTTAAAGTAGTTCTTCTCAATAACATGCTGTTACTTCCAATCTTACTTGATCCTTCTGTATTGATCATTTTAGTATGTAAGAGCAGAGTATGTGTTTGGTGCTTCTGCTCACTGGTTTTGGCTGTTGGGCATATTGTTGTGGCATATAGAACAAGTTGCAGAGAAAGAAGGAAGCTTTGGGTTTACAAAATTGACATTGAAGCTGTAGTTGTCTTCAAAGTTGGAAACTTTCCCTCTTTGTCTGTATATTTTATCGAACTTGGAAAGAAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

111

Amino Acids

12.13

Weight (kDa)

9.3

Isoelectric Point (pI)

40.74

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 15
AclWI GGATC 1 cut(s) 104
AgsI TTSAA 2 cut(s) 260, 277
AjuI GAANNNNNNNTTGG 2 cut(s) 220, 252
AluBI AGCT 3 cut(s) 23, 235, 263
AluI AGCT 3 cut(s) 23, 235, 263
AlwI GGATC 1 cut(s) 104
AlwNI CAGNNNCTG 1 cut(s) 26
ApeKI GCWGC 2 cut(s) 20, 23
BbsI GAAGAC 1 cut(s) 265
BbvI GCAGC 2 cut(s) 10, 32
BclI TGATCA 1 cut(s) 123
BfmI CTRYAG 1 cut(s) 264
BisI GCNGC 2 cut(s) 21, 24
BlsI GCNGC 2 cut(s) 22, 25
BpiI GAAGAC 1 cut(s) 265
Bse1I ACTGG 1 cut(s) 177
BseMII CTCAG 1 cut(s) 48
BseNI ACTGG 1 cut(s) 177
BseRI GAGGAG 1 cut(s) 24
BseXI GCAGC 2 cut(s) 10, 32
BsgI GTGCAG 1 cut(s) 39
Bsp143I GATC 2 cut(s) 109, 123
BspACI CCGC 1 cut(s) 15
BspCNI CTCAG 1 cut(s) 49
BspPI GGATC 1 cut(s) 104
BsrI ACTGG 1 cut(s) 177
BssMI GATC 2 cut(s) 109, 123
BstDEI CTNAG 1 cut(s) 57
BstKTI GATC 2 cut(s) 112, 126
BstMBI GATC 2 cut(s) 109, 123
BstMWI GCNNNNNNNGC 2 cut(s) 12, 29
BstNSI RCATGY 1 cut(s) 88
BstSFI CTRYAG 1 cut(s) 264
BstV1I GCAGC 2 cut(s) 10, 32
BstV2I GAAGAC 1 cut(s) 265
BtsIMutI CAGTG 1 cut(s) 170
CaiI CAGNNNCTG 1 cut(s) 26
CviAII CATG 1 cut(s) 85
CviJI RGCY 4 cut(s) 23, 182, 235, 263
CviKI_1 RGCY 4 cut(s) 23, 182, 235, 263
DdeI CTNAG 1 cut(s) 57
DpnI GATC 2 cut(s) 111, 125
DpnII GATC 2 cut(s) 109, 123
FaeI CATG 1 cut(s) 88
FaiI YATR 7 cut(s) 86, 136, 151, 192, 205, 207, 307
FalI AAGNNNNNCTT 2 cut(s) 57, 89
FatI CATG 1 cut(s) 84
FbaI TGATCA 1 cut(s) 123
Fnu4HI GCNGC 2 cut(s) 21, 24
Fsp4HI GCNGC 2 cut(s) 21, 24
GluI GCNGC 2 cut(s) 21, 24
Hin1II CATG 1 cut(s) 88
HindIII AAGCTT 1 cut(s) 233
Hpy166II GTNNAC 1 cut(s) 244
Hpy188I TCNGA 1 cut(s) 58
Hpy8I GTNNAC 1 cut(s) 244
HpyAV CCTTC 2 cut(s) 123, 222
HpyCH4V TGCA 2 cut(s) 20, 219
HpyF10VI GCNNNNNNNGC 2 cut(s) 12, 29
HpyF3I CTNAG 1 cut(s) 57
Hsp92II CATG 1 cut(s) 88
Ksp22I TGATCA 1 cut(s) 123
Kzo9I GATC 2 cut(s) 109, 123
LmnI GCTCC 1 cut(s) 37
LpnPI CCDG 1 cut(s) 158
Lsp1109I GCAGC 2 cut(s) 10, 32
MaeIII GTNAC 1 cut(s) 90
MalI GATC 2 cut(s) 111, 125
MboI GATC 2 cut(s) 109, 123
MboII GAAGA 2 cut(s) 65, 265
MluCI AATT 1 cut(s) 249
MmeI TCCRAC 1 cut(s) 262
MnlI CCTC 4 cut(s) 45, 52, 64, 304
MseI TTAA 1 cut(s) 63
MspA1I CMGCKG 1 cut(s) 23
MwoI GCNNNNNNNGC 2 cut(s) 12, 29
NdeII GATC 2 cut(s) 109, 123
NlaIII CATG 1 cut(s) 88
NspI RCATGY 1 cut(s) 88
PkrI GCNGC 2 cut(s) 22, 25
PstNI CAGNNNCTG 1 cut(s) 26
PvuII CAGCTG 1 cut(s) 23
SaqAI TTAA 1 cut(s) 63
SatI GCNGC 2 cut(s) 21, 24
Sau3AI GATC 2 cut(s) 109, 123
SetI ASST 5 cut(s) 11, 25, 63, 237, 265
SfcI CTRYAG 1 cut(s) 264
SgeI CNNG 6 cut(s) 19, 50, 97, 119, 185, 225
Sse9I AATT 1 cut(s) 249
SsiI CCGC 1 cut(s) 15
TaqI TCGA 1 cut(s) 315
TasI AATT 1 cut(s) 249
Tru1I TTAA 1 cut(s) 63
Tru9I TTAA 1 cut(s) 63
TscAI CASTG 1 cut(s) 177
TseI GCWGC 2 cut(s) 20, 23
TspRI CASTG 1 cut(s) 177
XceI RCATGY 1 cut(s) 88
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.