Prupe.6G184000_v2.0.a1

Cysteine-rich receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
N/A
Physical Location & Seq
Forward (+)
19197385 .. 19198006
622 bp
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UTR
Exon/CDS
Intron
Prupe.6G184000.1_v2.0.a1.CDS.1

Sequence Viewer

Length: 432 bp
ATGATATATCAACAATGTCTAAAAACTTCGTCCATGTTAGTCAATGTTGACCTTCTTATTGGTATATGCATCGGATATATGGCTCTAAAGTATATAATGTATGGGCAGTTTTCTATTAAATTAAATGTCTATAGTTTTGGTGTGTTGATTTTAGAAATTGTAAGTGAGCAAAAAAATAGTTGTTTTCGTTGTGGAGAGAATGTGGAGGATCTTTTAAAAAATGTGGCTGATAAGCCAACCATGGCTTTTGTTATTGTGATGCTGAATAGCTACTCCCTCAGTCTCCCTGTGCCCTCACAGCCATTCGACATGTCTTTGGGATCGGAGGGCAATTCCAGGGCAACAGGGTTGGATCAATACAAGAACAACTCTAACAAAGCACCAGAAAATGAGGCTTCATTAATATATGAAAAAGAAATTATATTGATGTAA

Protein Analysis

144

Amino Acids

16.0

Weight (kDa)

4.9

Isoelectric Point (pI)

39.35

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 3 cut(s) 216, 328, 360
AflIII ACRYGT 1 cut(s) 309
AjnI CCWGG 1 cut(s) 335
AluBI AGCT 1 cut(s) 270
AluI AGCT 1 cut(s) 270
Alw26I GTCTC 1 cut(s) 287
AlwI GGATC 3 cut(s) 216, 328, 360
AseI ATTAAT 1 cut(s) 401
BaeGI GKGCMC 1 cut(s) 294
BciT130I CCWGG 1 cut(s) 337
BcoDI GTCTC 1 cut(s) 287
BfmI CTRYAG 1 cut(s) 130
Bme1390I CCNGG 1 cut(s) 337
BmrFI CCNGG 1 cut(s) 337
BmsI GCATC 2 cut(s) 78, 249
BsaJI CCNNGG 2 cut(s) 240, 336
BsaXI ACNNNNNCTCC 2 cut(s) 186, 216
BseBI CCWGG 1 cut(s) 337
BseDI CCNNGG 2 cut(s) 240, 336
BseMII CTCAG 1 cut(s) 292
BseSI GKGCMC 1 cut(s) 294
BsmAI GTCTC 1 cut(s) 287
Bsp1286I GDGCHC 1 cut(s) 294
Bsp143I GATC 3 cut(s) 208, 320, 352
Bsp19I CCATGG 1 cut(s) 240
BspCNI CTCAG 1 cut(s) 291
BspPI GGATC 3 cut(s) 216, 328, 360
BssECI CCNNGG 2 cut(s) 240, 336
BssMI GATC 3 cut(s) 208, 320, 352
BssT1I CCWWGG 1 cut(s) 240
Bst2UI CCWGG 1 cut(s) 337
BstDEI CTNAG 1 cut(s) 278
BstDSI CCRYGG 1 cut(s) 240
BstKTI GATC 3 cut(s) 211, 323, 355
BstMAI GTCTC 1 cut(s) 287
BstMBI GATC 3 cut(s) 208, 320, 352
BstMWI GCNNNNNNNGC 1 cut(s) 298
BstNI CCWGG 1 cut(s) 337
BstNSI RCATGY 1 cut(s) 313
BstSCI CCNGG 1 cut(s) 335
BstSFI CTRYAG 1 cut(s) 130
BstSLI GKGCMC 1 cut(s) 294
BstX2I RGATCY 1 cut(s) 208
BstYI RGATCY 1 cut(s) 208
BtgI CCRYGG 1 cut(s) 240
CviAII CATG 3 cut(s) 34, 241, 310
CviJI RGCY 7 cut(s) 83, 227, 235, 245, 270, 301, 395
CviKI_1 RGCY 7 cut(s) 83, 227, 235, 245, 270, 301, 395
DdeI CTNAG 1 cut(s) 278
DpnI GATC 3 cut(s) 210, 322, 354
DpnII GATC 3 cut(s) 208, 320, 352
DraI TTTAAA 1 cut(s) 216
Eco130I CCWWGG 1 cut(s) 240
EcoRII CCWGG 1 cut(s) 335
EcoT14I CCWWGG 1 cut(s) 240
EcoT22I ATGCAT 1 cut(s) 71
ErhI CCWWGG 1 cut(s) 240
FaeI CATG 3 cut(s) 37, 244, 313
FatI CATG 3 cut(s) 33, 240, 309
Hin1II CATG 3 cut(s) 37, 244, 313
HincII GTYRAC 1 cut(s) 49
HindII GTYRAC 1 cut(s) 49
Hpy166II GTNNAC 1 cut(s) 49
Hpy188I TCNGA 2 cut(s) 74, 325
Hpy8I GTNNAC 1 cut(s) 49
HpyAV CCTTC 1 cut(s) 62
HpyCH4V TGCA 1 cut(s) 69
HpyF10VI GCNNNNNNNGC 1 cut(s) 298
HpyF3I CTNAG 1 cut(s) 278
Hsp92II CATG 3 cut(s) 37, 244, 313
Kzo9I GATC 3 cut(s) 208, 320, 352
LpnPI CCDG 5 cut(s) 300, 322, 330, 349, 396
LweI GCATC 2 cut(s) 78, 249
MalI GATC 3 cut(s) 210, 322, 354
MboI GATC 3 cut(s) 208, 320, 352
MflI RGATCY 1 cut(s) 208
MhlI GDGCHC 1 cut(s) 294
MluCI AATT 4 cut(s) 119, 156, 331, 417
MmeI TCCRAC 1 cut(s) 330
MnlI CCTC 5 cut(s) 199, 287, 304, 319, 385
Mph1103I ATGCAT 1 cut(s) 71
MseI TTAA 4 cut(s) 117, 122, 215, 401
MspR9I CCNGG 1 cut(s) 337
MvaI CCWGG 1 cut(s) 337
MwoI GCNNNNNNNGC 1 cut(s) 298
NcoI CCATGG 1 cut(s) 240
NdeII GATC 3 cut(s) 208, 320, 352
NlaIII CATG 3 cut(s) 37, 244, 313
NsiI ATGCAT 1 cut(s) 71
NspI RCATGY 1 cut(s) 313
PciI ACATGT 1 cut(s) 309
PscI ACATGT 1 cut(s) 309
PshBI ATTAAT 1 cut(s) 401
Psp6I CCWGG 1 cut(s) 335
PspGI CCWGG 1 cut(s) 335
PsuI RGATCY 1 cut(s) 208
SaqAI TTAA 4 cut(s) 117, 122, 215, 401
Sau3AI GATC 3 cut(s) 208, 320, 352
ScrFI CCNGG 1 cut(s) 337
SduI GDGCHC 1 cut(s) 294
SetI ASST 2 cut(s) 54, 272
SfaNI GCATC 2 cut(s) 78, 249
SfcI CTRYAG 1 cut(s) 130
SgeI CNNG 9 cut(s) 46, 253, 299, 322, 348, 349, 357, 373, 395
Sse9I AATT 4 cut(s) 119, 156, 331, 417
StyD4I CCNGG 1 cut(s) 335
StyI CCWWGG 1 cut(s) 240
TaqI TCGA 1 cut(s) 306
TasI AATT 4 cut(s) 119, 156, 331, 417
Tru1I TTAA 4 cut(s) 117, 122, 215, 401
Tru9I TTAA 4 cut(s) 117, 122, 215, 401
TspDTI ATGAA 2 cut(s) 387, 423
VspI ATTAAT 1 cut(s) 401
XceI RCATGY 1 cut(s) 313
Zsp2I ATGCAT 1 cut(s) 71
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.