Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

N/A

Physical Location & Seq

Genomic Coordinates Forward (+)

20792298 .. 20796142

Gene Structure 3845 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G200300.1_v2.0.a1.CDS.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 681 bp

ATGGCAGACCTTCCGGGGCTGGAGGAGAAGGAGAGACGGTTCCAGATCTTCAAGGACAACCTCAGCTACAAGCTCGGTCTGAACCGGTTCGCCGATCTGTCCAACGACGAGTACAGGTCAACTTTCCTGGGCACCAAGACCCGCTCTCAGAAGAGGAAGCACAAGGCCGCCACGGATGGCAGCAGCATCAGAGTCGACTGGACCAACCTTCCACCCCAACTCTCCTCGTCGTCCTCGTCGCCCTCATCACCTTATGAATCCGATGACCAACTGGAGGGTCAGCTCTGTCAAGGACGACGTTGCAAGAAATCCAAAACGGTGTGTCGTCGAACTTCTTCGACCCGGCGGTGCTCAAGCACGCCCTGTCCAAGGCCCTCGTCCCTCTTGCTGGTCGCTCCTCACTATTCTGCTTCTGATCCTCCATCATTCACACACCCTCAATTGCAAATTGTTTGGTTTTGGGTTTCAGAGAAAACACAGAGCATCAAAGCCTCTCGCTCCCTCTCTGTCAAGGACCACTTGTGTTGCAAGCCCGTCTTGCTTCAGGTTGCCATCACTTGGCAAATTGTTGTTGGAGCCATAACTGGAGTTACACCTTTTGTGGTGGCTAGGACTGAATTCAGCAAAAGAATAATCCTGTGCTTTCAAAGGGCTGAAAAAAAAAAAAAAAAATCGTTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000323 GO:0000932 GO:0003674 GO:0003824 GO:0004175 GO:0004197 GO:0005575 GO:0005576 GO:0005615 GO:0005622 GO:0005623 GO:0005737 GO:0005764 GO:0005773 GO:0005911 GO:0006508 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0008233 GO:0008234 GO:0009056 GO:0009057 GO:0009506 GO:0009507 GO:0009536 GO:0009605 GO:0009607 GO:0009620 GO:0009987 GO:0010494 GO:0016787 GO:0019538 GO:0030054 GO:0030163 GO:0032991 GO:0035770 GO:0036464 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044421 GO:0044424 GO:0044444 GO:0044464 GO:0048046 GO:0050832 GO:0050896 GO:0051603 GO:0051704 GO:0051707 GO:0055044 GO:0070011 GO:0071704 GO:0098542 GO:0140096 GO:1901564 GO:1901565 GO:1901575 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Granulin Inhibitor_I29 Peptidase_C1

Protein Analysis

227

Amino Acids

25.51

Weight (kDa)

9.91

Isoelectric Point (pI)

57.45

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	131
AccB7I	CCANNNNNTGG	1 cut(s)	558
AccBSI	CCGCTC	1 cut(s)	144
AccI	GTMKAC	1 cut(s)	195
AciI	CCGC	3 cut(s)	142, 168, 346
AclWI	GGATC	1 cut(s)	410
AcsI	RAATTY	1 cut(s)	617
AcuI	CTGAAG	1 cut(s)	527
AfaI	GTAC	1 cut(s)	113
AfiI	CCNNNNNNNGG	4 cut(s)	274, 369, 388, 558
AgeI	ACCGGT	1 cut(s)	84
AgsI	TTSAA	2 cut(s)	52, 647
AjnI	CCWGG	1 cut(s)	126
AloI	GAACNNNNNNTCC	2 cut(s)	23, 55
AluBI	AGCT	3 cut(s)	66, 73, 283
AluI	AGCT	3 cut(s)	66, 73, 283
Alw21I	GWGCWC	1 cut(s)	353
Alw26I	GTCTC	1 cut(s)	28
AlwI	GGATC	1 cut(s)	410
AoxI	GGCC	2 cut(s)	165, 371
ApeKI	GCWGC	2 cut(s)	180, 183
ApoI	RAATTY	1 cut(s)	617
AsiGI	ACCGGT	1 cut(s)	84
Asp700I	GAANNNNTTC	2 cut(s)	86, 334
AspS9I	GGNCC	3 cut(s)	201, 372, 514
AsuC2I	CCSGG	2 cut(s)	15, 343
AsuHPI	GGTGA	1 cut(s)	240
AvaII	GGWCC	2 cut(s)	201, 514
BaeGI	GKGCMC	1 cut(s)	134
BanI	GGYRCC	1 cut(s)	131
Bbv12I	GWGCWC	1 cut(s)	353
BbvCI	CCTCAGC	1 cut(s)	62
BbvI	GCAGC	2 cut(s)	192, 195
BccI	CCATC	3 cut(s)	170, 430, 560
BcgI	CGANNNNNNTGC	2 cut(s)	175, 209
BciT130I	CCWGG	1 cut(s)	128
BcnI	CCSGG	2 cut(s)	15, 343
BcoDI	GTCTC	1 cut(s)	28
BfaI	CTAG	1 cut(s)	609
BglII	AGATCT	1 cut(s)	45
BisI	GCNGC	3 cut(s)	168, 181, 184
BlsI	GCNGC	3 cut(s)	169, 182, 185
Bme1390I	CCNGG	3 cut(s)	15, 128, 343
Bme18I	GGWCC	2 cut(s)	201, 514
BmgT120I	GGNCC	3 cut(s)	201, 372, 514
BmiI	GGNNCC	3 cut(s)	41, 133, 577
BmrFI	CCNGG	3 cut(s)	15, 128, 343
BmsI	GCATC	2 cut(s)	195, 492
BpmI	CTGGAG	3 cut(s)	41, 293, 606
Bpu10I	CCTNAGC	1 cut(s)	62
BpuEI	CTTGAG	1 cut(s)	337
BpuMI	CCSGG	2 cut(s)	15, 343
BsaJI	CCNNGG	4 cut(s)	14, 127, 171, 368
BsaWI	WCCGGW	1 cut(s)	84
BsaXI	ACNNNNNCTCC	2 cut(s)	23, 53
Bsc4I	CCNNNNNNNGG	4 cut(s)	274, 369, 388, 558
Bse118I	RCCGGY	1 cut(s)	84
Bse1I	ACTGG	3 cut(s)	203, 276, 589
BseBI	CCWGG	1 cut(s)	128
BseDI	CCNNGG	4 cut(s)	14, 127, 171, 368
BseGI	GGATG	1 cut(s)	181
BseLI	CCNNNNNNNGG	4 cut(s)	274, 369, 388, 558
BseMII	CTCAG	2 cut(s)	76, 161
BseNI	ACTGG	3 cut(s)	203, 276, 589
BseRI	GAGGAG	3 cut(s)	38, 214, 387
BseSI	GKGCMC	1 cut(s)	134
BseXI	GCAGC	2 cut(s)	192, 195
BshFI	GGCC	2 cut(s)	167, 373
BshNI	GGYRCC	1 cut(s)	131
BshTI	ACCGGT	1 cut(s)	84
BsiHKAI	GWGCWC	1 cut(s)	353
BsiSI	CCGG	3 cut(s)	14, 85, 343
BslFI	GGGAC	1 cut(s)	364
BslI	CCNNNNNNNGG	4 cut(s)	274, 369, 388, 558
BsmAI	GTCTC	1 cut(s)	28
BsmBI	CGTCTC	1 cut(s)	28
BsmFI	GGGAC	1 cut(s)	364
BsnI	GGCC	2 cut(s)	167, 373
Bsp1286I	GDGCHC	2 cut(s)	134, 353
Bsp143I	GATC	3 cut(s)	45, 94, 415
BspACI	CCGC	3 cut(s)	142, 168, 346
BspANI	GGCC	2 cut(s)	167, 373
BspCNI	CTCAG	2 cut(s)	75, 160
BspLI	GGNNCC	3 cut(s)	41, 133, 577
BspPI	GGATC	1 cut(s)	410
BspT107I	GGYRCC	1 cut(s)	131
BsrBI	CCGCTC	1 cut(s)	144
BsrFI	RCCGGY	1 cut(s)	84
BsrI	ACTGG	3 cut(s)	203, 276, 589
BssAI	RCCGGY	1 cut(s)	84
BssECI	CCNNGG	4 cut(s)	14, 127, 171, 368
BssMI	GATC	3 cut(s)	45, 94, 415
BssT1I	CCWWGG	1 cut(s)	368
Bst2UI	CCWGG	1 cut(s)	128
Bst4CI	ACNGT	2 cut(s)	39, 319
Bst6I	CTCTTC	1 cut(s)	146
BstC8I	GCNNGC	2 cut(s)	359, 530
BstDEI	CTNAG	2 cut(s)	62, 147
BstDSI	CCRYGG	1 cut(s)	171
BstENI	CCTNNNNNAGG	1 cut(s)	367
BstF5I	GGATG	1 cut(s)	181
BstKTI	GATC	3 cut(s)	48, 97, 418
BstMAI	GTCTC	1 cut(s)	28
BstMBI	GATC	3 cut(s)	45, 94, 415
BstMWI	GCNNNNNNNGC	1 cut(s)	538
BstNI	CCWGG	1 cut(s)	128
BstSCI	CCNGG	3 cut(s)	13, 126, 341
BstSLI	GKGCMC	1 cut(s)	134
BstV1I	GCAGC	2 cut(s)	192, 195
BstX2I	RGATCY	1 cut(s)	45
BstYI	RGATCY	1 cut(s)	45
BsuRI	GGCC	2 cut(s)	167, 373
BtgI	CCRYGG	1 cut(s)	171
BtsCI	GGATG	1 cut(s)	181
Cac8I	GCNNGC	2 cut(s)	359, 530
Cfr10I	RCCGGY	1 cut(s)	84
Cfr13I	GGNCC	3 cut(s)	201, 372, 514
Csp6I	GTAC	1 cut(s)	112
CspAI	ACCGGT	1 cut(s)	84
CspCI	CAANNNNNGTGG	2 cut(s)	506, 541
CviQI	GTAC	1 cut(s)	112
DdeI	CTNAG	2 cut(s)	62, 147
DpnI	GATC	3 cut(s)	47, 96, 417
DpnII	GATC	3 cut(s)	45, 94, 415
Eam1104I	CTCTTC	1 cut(s)	146
EarI	CTCTTC	1 cut(s)	146
Eco130I	CCWWGG	1 cut(s)	368
Eco47I	GGWCC	2 cut(s)	201, 514
Eco57I	CTGAAG	1 cut(s)	527
EcoNI	CCTNNNNNAGG	1 cut(s)	367
EcoO109I	RGGNCCY	1 cut(s)	372
EcoRI	GAATTC	1 cut(s)	617
EcoRII	CCWGG	1 cut(s)	126
EcoT14I	CCWWGG	1 cut(s)	368
ErhI	CCWWGG	1 cut(s)	368
Esp3I	CGTCTC	1 cut(s)	28
FaiI	YATR	2 cut(s)	255, 581
FalI	AAGNNNNNCTT	4 cut(s)	503, 535, 521, 553
FaqI	GGGAC	1 cut(s)	364
FauI	CCCGC	1 cut(s)	149
FblI	GTMKAC	1 cut(s)	195
Fnu4HI	GCNGC	3 cut(s)	168, 181, 184
FokI	GGATG	1 cut(s)	188
Fsp4HI	GCNGC	3 cut(s)	168, 181, 184
FspBI	CTAG	1 cut(s)	609
GluI	GCNGC	3 cut(s)	168, 181, 184
GsuI	CTGGAG	3 cut(s)	41, 293, 606
HaeIII	GGCC	2 cut(s)	167, 373
HapII	CCGG	3 cut(s)	14, 85, 343
HincII	GTYRAC	2 cut(s)	120, 196
HindII	GTYRAC	2 cut(s)	120, 196
HinfI	GANTC	2 cut(s)	192, 257
HpaII	CCGG	3 cut(s)	14, 85, 343
HphI	GGTGA	1 cut(s)	240
Hpy166II	GTNNAC	2 cut(s)	120, 196
Hpy188I	TCNGA	6 cut(s)	81, 150, 191, 262, 415, 469
Hpy188III	TCNNGA	1 cut(s)	43
Hpy8I	GTNNAC	2 cut(s)	120, 196
Hpy99I	CGWCG	5 cut(s)	110, 232, 241, 300, 330
HpyAV	CCTTC	3 cut(s)	20, 22, 218
HpyCH4III	ACNGT	2 cut(s)	39, 319
HpyCH4IV	ACGT	1 cut(s)	298
HpyCH4V	TGCA	3 cut(s)	303, 445, 528
HpyF10VI	GCNNNNNNNGC	1 cut(s)	538
HpyF3I	CTNAG	2 cut(s)	62, 147
HpySE526I	ACGT	1 cut(s)	298
Kzo9I	GATC	3 cut(s)	45, 94, 415
LmnI	GCTCC	3 cut(s)	400, 503, 575
Lsp1109I	GCAGC	2 cut(s)	192, 195
LweI	GCATC	2 cut(s)	195, 492
MaeI	CTAG	1 cut(s)	609
MaeII	ACGT	1 cut(s)	298
MaeIII	GTNAC	1 cut(s)	589
MalI	GATC	3 cut(s)	47, 96, 417
MbiI	CCGCTC	1 cut(s)	144
MboI	GATC	3 cut(s)	45, 94, 415
MboII	GAAGA	3 cut(s)	40, 163, 327
MfeI	CAATTG	1 cut(s)	440
MflI	RGATCY	1 cut(s)	45
MhlI	GDGCHC	2 cut(s)	134, 353
MluCI	AATT	4 cut(s)	440, 447, 564, 617
MlyI	GAGTC	1 cut(s)	201
MmeI	TCCRAC	2 cut(s)	126, 553
MroXI	GAANNNNTTC	2 cut(s)	86, 334
MspI	CCGG	3 cut(s)	14, 85, 343
MspR9I	CCNGG	3 cut(s)	15, 128, 343
MunI	CAATTG	1 cut(s)	440
MvaI	CCWGG	1 cut(s)	128
MwoI	GCNNNNNNNGC	1 cut(s)	538
NciI	CCSGG	2 cut(s)	15, 343
NdeII	GATC	3 cut(s)	45, 94, 415
NlaIV	GGNNCC	3 cut(s)	41, 133, 577
PcsI	WCGNNNNNNNCGW	1 cut(s)	233
PdmI	GAANNNNTTC	2 cut(s)	86, 334
PfeI	GAWTC	1 cut(s)	257
PflMI	CCANNNNNTGG	1 cut(s)	558
PinAI	ACCGGT	1 cut(s)	84
PkrI	GCNGC	3 cut(s)	169, 182, 185
PleI	GAGTC	1 cut(s)	200
PpsI	GAGTC	1 cut(s)	200
Psp6I	CCWGG	1 cut(s)	126
PspGI	CCWGG	1 cut(s)	126
PspN4I	GGNNCC	3 cut(s)	41, 133, 577
PspPI	GGNCC	3 cut(s)	201, 372, 514
PsuI	RGATCY	1 cut(s)	45
RsaI	GTAC	1 cut(s)	113
RsaNI	GTAC	1 cut(s)	112
SalI	GTCGAC	1 cut(s)	194
SatI	GCNGC	3 cut(s)	168, 181, 184
Sau3AI	GATC	3 cut(s)	45, 94, 415
Sau96I	GGNCC	3 cut(s)	201, 372, 514
SchI	GAGTC	1 cut(s)	201
ScrFI	CCNGG	3 cut(s)	15, 128, 343
SduI	GDGCHC	2 cut(s)	134, 353
SfaNI	GCATC	2 cut(s)	195, 492
SinI	GGWCC	2 cut(s)	201, 514
SmlI	CTYRAG	1 cut(s)	352
SmoI	CTYRAG	1 cut(s)	352
Sse9I	AATT	4 cut(s)	440, 447, 564, 617
SsiI	CCGC	3 cut(s)	142, 168, 346
SspMI	CTAG	1 cut(s)	609
StyD4I	CCNGG	3 cut(s)	13, 126, 341
StyI	CCWWGG	1 cut(s)	368
TaaI	ACNGT	2 cut(s)	39, 319
TaiI	ACGT	1 cut(s)	301
TaqI	TCGA	3 cut(s)	195, 328, 338
TaqII	GACCGA	1 cut(s)	65
TasI	AATT	4 cut(s)	440, 447, 564, 617
TatI	WGTACW	1 cut(s)	111
TauI	GCSGC	1 cut(s)	170
TfiI	GAWTC	1 cut(s)	257
TseI	GCWGC	2 cut(s)	180, 183
TspDTI	ATGAA	1 cut(s)	270
TspGWI	ACGGA	1 cut(s)	188
Van91I	CCANNNNNTGG	1 cut(s)	558
VpaK11BI	GGWCC	2 cut(s)	201, 514
XagI	CCTNNNNNAGG	1 cut(s)	367
XapI	RAATTY	1 cut(s)	617
XmiI	GTMKAC	1 cut(s)	195
XmnI	GAANNNNTTC	2 cut(s)	86, 334
XspI	CTAG	1 cut(s)	609

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.