Prupe.6G205500_v2.0.a1

sinapyl alcohol dehydrogenase activity

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
N/A
Physical Location & Seq
Reverse (-)
21358238 .. 21358738
501 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G205500.1_v2.0.a1.CDS.2

Sequence Viewer

Length: 255 bp
ATGGGAACTATGGATGGTATCATTGACACCGTTTCAGCCCCTCACCCTCTCTTGCCTTTGATTGGCTTGCTCAAGACTAGTGGAAAACTAATTTTGTGCAATGGGAGGACTAAAAGAGACACAACAGATGTGGAAGTTGTTCCAATGGATTATGTGAACACTGCCCTTGACCGACTTGACAAGGGTGATGTTAAGTATCGTTTTGTCATTGATGTGGCAAAAACCATAAATAATCATGATGAAGCATCTCCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

85

Amino Acids

9.19

Weight (kDa)

5.49

Isoelectric Point (pI)

10.22

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AfiI CCNNNNNNNGG 1 cut(s) 62
AhlI ACTAGT 1 cut(s) 77
Alw26I GTCTC 1 cut(s) 111
Asp700I GAANNNNTTC 1 cut(s) 138
AsuHPI GGTGA 2 cut(s) 35, 197
BccI CCATC 1 cut(s) 8
BcoDI GTCTC 1 cut(s) 111
BcuI ACTAGT 1 cut(s) 77
BfaI CTAG 1 cut(s) 78
BpuEI CTTGAG 1 cut(s) 56
Bsc4I CCNNNNNNNGG 1 cut(s) 62
Bse3DI GCAATG 1 cut(s) 106
BseGI GGATG 1 cut(s) 19
BseLI CCNNNNNNNGG 1 cut(s) 62
BseMI GCAATG 1 cut(s) 106
BslI CCNNNNNNNGG 1 cut(s) 62
BsmAI GTCTC 1 cut(s) 111
BspHI TCATGA 1 cut(s) 235
BsrDI GCAATG 1 cut(s) 106
Bst4CI ACNGT 1 cut(s) 31
BstC8I GCNNGC 1 cut(s) 68
BstF5I GGATG 1 cut(s) 19
BstMAI GTCTC 1 cut(s) 111
BtsCI GGATG 1 cut(s) 19
BtsI GCAGTG 1 cut(s) 159
BtsIMutI CAGTG 1 cut(s) 159
Cac8I GCNNGC 1 cut(s) 68
CciI TCATGA 1 cut(s) 235
CspCI CAANNNNNGTGG 4 cut(s) 61, 96, 111, 146
CviAII CATG 1 cut(s) 236
CviJI RGCY 2 cut(s) 38, 66
CviKI_1 RGCY 2 cut(s) 38, 66
FaeI CATG 1 cut(s) 239
FaiI YATR 4 cut(s) 11, 153, 227, 237
FatI CATG 1 cut(s) 235
FokI GGATG 1 cut(s) 26
FspBI CTAG 1 cut(s) 78
Hin1II CATG 1 cut(s) 239
HphI GGTGA 2 cut(s) 35, 197
Hpy166II GTNNAC 1 cut(s) 157
Hpy188III TCNNGA 2 cut(s) 73, 236
Hpy8I GTNNAC 1 cut(s) 157
HpyCH4III ACNGT 1 cut(s) 31
HpyCH4V TGCA 1 cut(s) 99
Hsp92II CATG 1 cut(s) 239
MaeI CTAG 1 cut(s) 78
MluCI AATT 1 cut(s) 90
MnlI CCTC 3 cut(s) 51, 57, 99
MroXI GAANNNNTTC 1 cut(s) 138
MseI TTAA 2 cut(s) 192, 253
MslI CAYNNNNRTG 1 cut(s) 212
NlaIII CATG 1 cut(s) 239
PagI TCATGA 1 cut(s) 235
PdmI GAANNNNTTC 1 cut(s) 138
RseI CAYNNNNRTG 1 cut(s) 212
SaqAI TTAA 2 cut(s) 192, 253
SgeI CNNG 8 cut(s) 64, 79, 85, 90, 179, 188, 193, 248
SmiMI CAYNNNNRTG 1 cut(s) 212
SmlI CTYRAG 1 cut(s) 71
SmoI CTYRAG 1 cut(s) 71
SpeI ACTAGT 1 cut(s) 77
Sse9I AATT 1 cut(s) 90
SspMI CTAG 1 cut(s) 78
TaaI ACNGT 1 cut(s) 31
TaqII GACCGA 1 cut(s) 186
TasI AATT 1 cut(s) 90
Tru1I TTAA 2 cut(s) 192, 253
Tru9I TTAA 2 cut(s) 192, 253
TscAI CASTG 1 cut(s) 166
TspDTI ATGAA 1 cut(s) 255
TspRI CASTG 1 cut(s) 166
XmnI GAANNNNTTC 1 cut(s) 138
XspI CTAG 1 cut(s) 78
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.