Prupe.6G239100_v2.0.a1

MLO-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
N/A
Physical Location & Seq
Forward (+)
23868450 .. 23871382
2933 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G239100.1_v2.0.a1.CDS.9

Sequence Viewer

Length: 1050 bp
ATGGCAGTAGCCTCTGAAGGCACCTCTATAGAGTACAAGCCGACATGGGCACTTGCCACCGTTTACTTCTTCTTCATTTTCACCGCTGTCTTCCTCCGGTACTCCATCCATCTCCTTGCCAACGTACAGTTGATGTTTCTGGGATTTGCATCACTTTTATTGGCAGTAATCCAAGATTCTATATCCAAATTCTGCATACCAGCCAAGCTTGTAGACACCATGCTTCCATGTCGCAAAAGGGTTGCACCCGAATCAACCCAAAAAGAAGAAGATGCTGAGCACTTTGTGGCAAGAAATTTCTCGACAGGAGCAGGTGGTTTGTATGGTGAAATTCATAGGTTGCTTGCAGATGAAGCTGTTTCTGATTCTTGCAGTGATGGAAAAGTACCCTTCATGAAAAAACGTTCTCTGCATCAGCTTCACATACTGATTTTCGTGCTGGCGGTTGTGCACATTGTGTATAGTGTTCTCACCATGGCTTTGGGAAGGGCCAAGATGAGGCGCTTTCAAGCTTGGGAGAAAGATGCTCAAGCTCAAACAATGGGCCAGCACCAAGTCGCCCATGAGAAATCAGTTCATCTATGGATTACTCACCTGTCAAGCAGGCACAACAACTTCAATTTCCAACAGTACATACAGCTATCCTTGGAGGAAGATTTCAGGATTATGGTTGGCATCAGCCCTTTAATGTGGTTTCTAGCAGCTCCTTTTATGCTGTTGGATGTATATGGCTGGTATGTGTATCTCTGGATATCCTATGTTCCAATCTTGGTCGTTCTGGTTTTAGGAACCAAACTTGAACACATTGTTGCAACAATGGCTCTTCAAATTAAAGAACAGAACAGTGCAATTTCCGAAACACCTCTTGTTCAACACGATGATCTCTTCTGGTTTAGGAAACCAAAATTTGTCTTGGTGCTGCTACATTATACTCTCTTTGTGAATGCATTTGAGTTTGCCTTCTTCATTTGGGTTACAATCCAGTTCGGGTTGACATCTTGCTACCACGAGCACACTATGATCATTGTTACAAGGGTTTTCTTAGCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0006950 GO:0006952 GO:0008150 GO:0016020 GO:0044464 GO:0050896 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Mlo

Protein Analysis

350

Amino Acids

40.14

Weight (kDa)

7.29

Isoelectric Point (pI)

34.56

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 302
Acc36I ACCTGC 1 cut(s) 302
AccB1I GGYRCC 1 cut(s) 20
AccI GTMKAC 1 cut(s) 213
AciI CCGC 2 cut(s) 84, 443
AclI AACGTT 1 cut(s) 403
AcsI RAATTY 4 cut(s) 188, 295, 330, 905
AcuI CTGAAG 1 cut(s) 36
AdeI CACNNNGTG 2 cut(s) 286, 457
AfaI GTAC 5 cut(s) 35, 101, 126, 387, 632
AfiI CCNNNNNNNGG 1 cut(s) 498
AgsI TTSAA 5 cut(s) 509, 619, 800, 827, 872
AluBI AGCT 7 cut(s) 208, 356, 418, 512, 533, 640, 704
AluI AGCT 7 cut(s) 208, 356, 418, 512, 533, 640, 704
Alw21I GWGCWC 3 cut(s) 282, 453, 1014
Alw44I GTGCAC 1 cut(s) 449
AoxI GGCC 2 cut(s) 489, 544
ApaLI GTGCAC 1 cut(s) 449
ApeKI GCWGC 2 cut(s) 701, 919
ApoI RAATTY 4 cut(s) 188, 295, 330, 905
AspLEI GCGC 1 cut(s) 504
AspS9I GGNCC 2 cut(s) 489, 544
AsuHPI GGTGA 4 cut(s) 73, 338, 463, 584
BaeGI GKGCMC 2 cut(s) 52, 453
BanI GGYRCC 1 cut(s) 20
BauI CACGAG 1 cut(s) 1007
BbsI GAAGAC 1 cut(s) 82
Bbv12I GWGCWC 3 cut(s) 282, 453, 1014
BbvI GCAGC 2 cut(s) 713, 906
BccI CCATC 3 cut(s) 113, 117, 371
BclI TGATCA 1 cut(s) 1020
BfaI CTAG 1 cut(s) 698
BfmI CTRYAG 1 cut(s) 27
BfoI RGCGCY 1 cut(s) 505
BfuAI ACCTGC 1 cut(s) 302
BisI GCNGC 2 cut(s) 702, 920
BlpI GCTNAGC 1 cut(s) 276
BlsI GCNGC 2 cut(s) 703, 921
BmgT120I GGNCC 2 cut(s) 489, 544
BmiI GGNNCC 2 cut(s) 22, 790
BmsI GCATC 5 cut(s) 158, 262, 421, 514, 684
BpiI GAAGAC 1 cut(s) 82
Bpu1102I GCTNAGC 1 cut(s) 276
BpuEI CTTGAG 1 cut(s) 513
BsaBI GATNNNNATC 1 cut(s) 148
BsaJI CCNNGG 2 cut(s) 474, 645
BsaWI WCCGGW 1 cut(s) 96
Bsc4I CCNNNNNNNGG 1 cut(s) 498
Bse1I ACTGG 1 cut(s) 982
Bse8I GATNNNNATC 1 cut(s) 148
BseDI CCNNGG 2 cut(s) 474, 645
BseGI GGATG 2 cut(s) 105, 727
BseJI GATNNNNATC 1 cut(s) 148
BseLI CCNNNNNNNGG 1 cut(s) 498
BseMII CTCAG 1 cut(s) 267
BseNI ACTGG 1 cut(s) 982
BseSI GKGCMC 2 cut(s) 52, 453
BseXI GCAGC 2 cut(s) 713, 906
BshFI GGCC 2 cut(s) 491, 546
BshNI GGYRCC 1 cut(s) 20
BsiHKAI GWGCWC 3 cut(s) 282, 453, 1014
BsiSI CCGG 1 cut(s) 97
BslI CCNNNNNNNGG 1 cut(s) 498
BsmI GAATGC 1 cut(s) 949
BsnI GGCC 2 cut(s) 491, 546
Bsp1286I GDGCHC 4 cut(s) 52, 282, 453, 1014
Bsp143I GATC 2 cut(s) 880, 1020
Bsp1720I GCTNAGC 1 cut(s) 276
Bsp19I CCATGG 1 cut(s) 474
BspACI CCGC 2 cut(s) 84, 443
BspANI GGCC 2 cut(s) 491, 546
BspCNI CTCAG 1 cut(s) 268
BspHI TCATGA 1 cut(s) 393
BspLI GGNNCC 2 cut(s) 22, 790
BspMI ACCTGC 1 cut(s) 302
BspQI GCTCTTC 1 cut(s) 828
BspT107I GGYRCC 1 cut(s) 20
BsrI ACTGG 1 cut(s) 982
BssECI CCNNGG 2 cut(s) 474, 645
BssMI GATC 2 cut(s) 880, 1020
BssSI CACGAG 1 cut(s) 1007
BssT1I CCWWGG 2 cut(s) 474, 645
Bst2BI CACGAG 1 cut(s) 1007
Bst4CI ACNGT 4 cut(s) 61, 129, 630, 845
Bst6I CTCTTC 2 cut(s) 828, 890
BstC8I GCNNGC 4 cut(s) 345, 441, 548, 605
BstDEI CTNAG 2 cut(s) 276, 1042
BstDSI CCRYGG 1 cut(s) 474
BstF5I GGATG 2 cut(s) 105, 727
BstH2I RGCGCY 1 cut(s) 505
BstHHI GCGC 1 cut(s) 504
BstKTI GATC 2 cut(s) 883, 1023
BstMBI GATC 2 cut(s) 880, 1020
BstMWI GCNNNNNNNGC 2 cut(s) 353, 818
BstSFI CTRYAG 1 cut(s) 27
BstSLI GKGCMC 2 cut(s) 52, 453
BstV1I GCAGC 2 cut(s) 713, 906
BstV2I GAAGAC 1 cut(s) 82
BstXI CCANNNNNNTGG 1 cut(s) 481
BsuRI GGCC 2 cut(s) 491, 546
BtgI CCRYGG 1 cut(s) 474
BtsCI GGATG 2 cut(s) 105, 727
BtsI GCAGTG 1 cut(s) 379
BtsIMutI CAGTG 2 cut(s) 379, 850
BveI ACCTGC 1 cut(s) 302
Cac8I GCNNGC 4 cut(s) 345, 441, 548, 605
CciI TCATGA 1 cut(s) 393
CfoI GCGC 1 cut(s) 504
Cfr13I GGNCC 2 cut(s) 489, 544
Csp6I GTAC 5 cut(s) 34, 100, 125, 386, 631
CviAII CATG 6 cut(s) 45, 220, 228, 394, 475, 563
CviQI GTAC 5 cut(s) 34, 100, 125, 386, 631
DdeI CTNAG 2 cut(s) 276, 1042
DpnI GATC 2 cut(s) 882, 1022
DpnII GATC 2 cut(s) 880, 1020
DraIII CACNNNGTG 2 cut(s) 286, 457
Eam1104I CTCTTC 2 cut(s) 828, 890
EarI CTCTTC 2 cut(s) 828, 890
Eco130I CCWWGG 2 cut(s) 474, 645
Eco32I GATATC 1 cut(s) 753
Eco57I CTGAAG 1 cut(s) 36
EcoRV GATATC 1 cut(s) 753
EcoT14I CCWWGG 2 cut(s) 474, 645
EcoT22I ATGCAT 1 cut(s) 949
ErhI CCWWGG 2 cut(s) 474, 645
FaeI CATG 6 cut(s) 48, 223, 231, 397, 478, 566
FatI CATG 6 cut(s) 44, 219, 227, 393, 474, 562
FbaI TGATCA 1 cut(s) 1020
FblI GTMKAC 1 cut(s) 213
Fnu4HI GCNGC 2 cut(s) 702, 920
FokI GGATG 2 cut(s) 92, 734
Fsp4HI GCNGC 2 cut(s) 702, 920
FspBI CTAG 1 cut(s) 698
GlaI GCGC 1 cut(s) 503
GluI GCNGC 2 cut(s) 702, 920
HaeII RGCGCY 1 cut(s) 505
HaeIII GGCC 2 cut(s) 491, 546
HapII CCGG 1 cut(s) 97
HhaI GCGC 1 cut(s) 504
Hin1II CATG 6 cut(s) 48, 223, 231, 397, 478, 566
Hin6I GCGC 1 cut(s) 502
HinP1I GCGC 1 cut(s) 502
HincII GTYRAC 1 cut(s) 993
HindII GTYRAC 1 cut(s) 993
HindIII AAGCTT 2 cut(s) 206, 510
HinfI GANTC 3 cut(s) 176, 251, 365
HpaII CCGG 1 cut(s) 97
HphI GGTGA 4 cut(s) 73, 338, 463, 584
Hpy166II GTNNAC 4 cut(s) 64, 214, 451, 993
Hpy188I TCNGA 3 cut(s) 16, 364, 856
Hpy188III TCNNGA 4 cut(s) 301, 394, 661, 748
Hpy8I GTNNAC 4 cut(s) 64, 214, 451, 993
HpyAV CCTTC 4 cut(s) 11, 400, 480, 970
HpyCH4III ACNGT 4 cut(s) 61, 129, 630, 845
HpyCH4IV ACGT 2 cut(s) 123, 403
HpyF10VI GCNNNNNNNGC 2 cut(s) 353, 818
HpyF3I CTNAG 2 cut(s) 276, 1042
HpySE526I ACGT 2 cut(s) 123, 403
Hsp92II CATG 6 cut(s) 48, 223, 231, 397, 478, 566
HspAI GCGC 1 cut(s) 502
Ksp22I TGATCA 1 cut(s) 1020
Kzo9I GATC 2 cut(s) 880, 1020
LguI GCTCTTC 1 cut(s) 828
LmnI GCTCC 2 cut(s) 308, 709
Lsp1109I GCAGC 2 cut(s) 713, 906
LweI GCATC 5 cut(s) 158, 262, 421, 514, 684
MaeI CTAG 1 cut(s) 698
MaeII ACGT 2 cut(s) 123, 403
MaeIII GTNAC 2 cut(s) 973, 1027
MalI GATC 2 cut(s) 882, 1022
MboI GATC 2 cut(s) 880, 1020
MboII GAAGA 9 cut(s) 61, 64, 82, 278, 281, 665, 815, 877, 955
MhlI GDGCHC 4 cut(s) 52, 282, 453, 1014
MluCI AATT 7 cut(s) 188, 295, 330, 619, 828, 849, 905
MmeI TCCRAC 2 cut(s) 649, 699
MnlI CCTC 6 cut(s) 22, 34, 104, 492, 643, 873
Mph1103I ATGCAT 1 cut(s) 949
MseI TTAA 2 cut(s) 686, 831
MspA1I CMGCKG 1 cut(s) 86
MspI CCGG 1 cut(s) 97
Mva1269I GAATGC 1 cut(s) 949
MwoI GCNNNNNNNGC 2 cut(s) 353, 818
NcoI CCATGG 1 cut(s) 474
NdeII GATC 2 cut(s) 880, 1020
NlaIII CATG 6 cut(s) 48, 223, 231, 397, 478, 566
NlaIV GGNNCC 2 cut(s) 22, 790
NsiI ATGCAT 1 cut(s) 949
PagI TCATGA 1 cut(s) 393
PaqCI CACCTGC 1 cut(s) 302
PciSI GCTCTTC 1 cut(s) 828
PctI GAATGC 1 cut(s) 949
PfeI GAWTC 3 cut(s) 176, 251, 365
PkrI GCNGC 2 cut(s) 703, 921
Psp1406I AACGTT 1 cut(s) 403
PspN4I GGNNCC 2 cut(s) 22, 790
PspPI GGNCC 2 cut(s) 489, 544
RsaI GTAC 5 cut(s) 35, 101, 126, 387, 632
RsaNI GTAC 5 cut(s) 34, 100, 125, 386, 631
SapI GCTCTTC 1 cut(s) 828
SaqAI TTAA 2 cut(s) 686, 831
SatI GCNGC 2 cut(s) 702, 920
Sau3AI GATC 2 cut(s) 880, 1020
Sau96I GGNCC 2 cut(s) 489, 544
SduI GDGCHC 4 cut(s) 52, 282, 453, 1014
SfaNI GCATC 5 cut(s) 158, 262, 421, 514, 684
SfcI CTRYAG 1 cut(s) 27
SmlI CTYRAG 1 cut(s) 528
SmoI CTYRAG 1 cut(s) 528
Sse9I AATT 7 cut(s) 188, 295, 330, 619, 828, 849, 905
SsiI CCGC 2 cut(s) 84, 443
SspMI CTAG 1 cut(s) 698
StyI CCWWGG 2 cut(s) 474, 645
TaaI ACNGT 4 cut(s) 61, 129, 630, 845
TaiI ACGT 2 cut(s) 126, 406
TaqI TCGA 1 cut(s) 302
TasI AATT 7 cut(s) 188, 295, 330, 619, 828, 849, 905
TatI WGTACW 2 cut(s) 33, 630
TfiI GAWTC 3 cut(s) 176, 251, 365
Tru1I TTAA 2 cut(s) 686, 831
Tru9I TTAA 2 cut(s) 686, 831
TscAI CASTG 2 cut(s) 379, 850
TseI GCWGC 2 cut(s) 701, 919
TspDTI ATGAA 7 cut(s) 64, 323, 366, 382, 410, 566, 955
TspRI CASTG 2 cut(s) 379, 850
VneI GTGCAC 1 cut(s) 449
XapI RAATTY 4 cut(s) 188, 295, 330, 905
XmiI GTMKAC 1 cut(s) 213
XspI CTAG 1 cut(s) 698
Zsp2I ATGCAT 1 cut(s) 949
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.