Prupe.6G248300_v2.0.a1

Protein of unknown function (DUF4079)

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
N/A
Physical Location & Seq
Reverse (-)
24427995 .. 24428324
330 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G248300.1_v2.0.a1.CDS.1

Sequence Viewer

Length: 213 bp
ATGAAAACAGCACGAACTATACAAAATTCATTCACCCTAATTTTTCAGCAGCCAAGACTCTCTTCGACTGCTATCACGGTGCTATGGGCAGCGGCTGTGGCTCTTACACCTGCAATGCAAAAAGGTAGTGAGACAGCCGGAAACCTACATATTACGTTGAATGTGATAATGTTCTGCTTTTCATGTGGCAAATACCTACTGGATGGGAGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

71

Amino Acids

7.65

Weight (kDa)

9.69

Isoelectric Point (pI)

29.99

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 118
Acc36I ACCTGC 1 cut(s) 118
AciI CCGC 1 cut(s) 92
AcsI RAATTY 1 cut(s) 25
AgsI TTSAA 1 cut(s) 160
AjuI GAANNNNNNNTTGG 2 cut(s) 46, 78
Alw26I GTCTC 1 cut(s) 125
AlwNI CAGNNNCTG 1 cut(s) 95
ApeKI GCWGC 2 cut(s) 49, 89
ApoI RAATTY 1 cut(s) 25
AsuHPI GGTGA 1 cut(s) 25
BbvI GCAGC 2 cut(s) 61, 101
BccI CCATC 1 cut(s) 197
BcoDI GTCTC 1 cut(s) 125
BfuAI ACCTGC 1 cut(s) 118
BisI GCNGC 3 cut(s) 50, 90, 93
BlsI GCNGC 3 cut(s) 51, 91, 94
Bse1I ACTGG 1 cut(s) 204
Bse3DI GCAATG 1 cut(s) 120
BseGI GGATG 1 cut(s) 208
BseMI GCAATG 1 cut(s) 120
BseNI ACTGG 1 cut(s) 204
BseXI GCAGC 2 cut(s) 61, 101
BsiSI CCGG 1 cut(s) 138
BsmAI GTCTC 1 cut(s) 125
BspACI CCGC 1 cut(s) 92
BspMI ACCTGC 1 cut(s) 118
BsrDI GCAATG 1 cut(s) 120
BsrI ACTGG 1 cut(s) 204
Bst4CI ACNGT 1 cut(s) 79
Bst6I CTCTTC 1 cut(s) 67
BstF5I GGATG 1 cut(s) 208
BstMAI GTCTC 1 cut(s) 125
BstMWI GCNNNNNNNGC 1 cut(s) 98
BstV1I GCAGC 2 cut(s) 61, 101
BtsCI GGATG 1 cut(s) 208
BveI ACCTGC 1 cut(s) 118
CaiI CAGNNNCTG 1 cut(s) 95
CviAII CATG 1 cut(s) 183
CviJI RGCY 4 cut(s) 52, 95, 101, 137
CviKI_1 RGCY 4 cut(s) 52, 95, 101, 137
Eam1104I CTCTTC 1 cut(s) 67
EarI CTCTTC 1 cut(s) 67
FaeI CATG 1 cut(s) 186
FaiI YATR 4 cut(s) 20, 85, 150, 184
FalI AAGNNNNNCTT 2 cut(s) 46, 78
FatI CATG 1 cut(s) 182
Fnu4HI GCNGC 3 cut(s) 50, 90, 93
Fsp4HI GCNGC 3 cut(s) 50, 90, 93
GluI GCNGC 3 cut(s) 50, 90, 93
HapII CCGG 1 cut(s) 138
Hin1II CATG 1 cut(s) 186
HinfI GANTC 1 cut(s) 57
HpaII CCGG 1 cut(s) 138
HphI GGTGA 1 cut(s) 25
HpyCH4III ACNGT 1 cut(s) 79
HpyCH4IV ACGT 1 cut(s) 155
HpyCH4V TGCA 2 cut(s) 113, 118
HpyF10VI GCNNNNNNNGC 1 cut(s) 98
HpySE526I ACGT 1 cut(s) 155
Hsp92II CATG 1 cut(s) 186
LpnPI CCDG 3 cut(s) 123, 151, 185
Lsp1109I GCAGC 2 cut(s) 61, 101
MaeII ACGT 1 cut(s) 155
MboII GAAGA 1 cut(s) 54
MluCI AATT 2 cut(s) 25, 39
MlyI GAGTC 1 cut(s) 51
MspA1I CMGCKG 1 cut(s) 92
MspI CCGG 1 cut(s) 138
MwoI GCNNNNNNNGC 1 cut(s) 98
NlaIII CATG 1 cut(s) 186
PaqCI CACCTGC 1 cut(s) 118
PkrI GCNGC 3 cut(s) 51, 91, 94
PleI GAGTC 1 cut(s) 51
PpsI GAGTC 1 cut(s) 51
PstNI CAGNNNCTG 1 cut(s) 95
SatI GCNGC 3 cut(s) 50, 90, 93
SchI GAGTC 1 cut(s) 51
SetI ASST 5 cut(s) 112, 127, 147, 158, 198
SgeI CNNG 6 cut(s) 24, 66, 88, 122, 150, 195
Sse9I AATT 2 cut(s) 25, 39
SsiI CCGC 1 cut(s) 92
TaaI ACNGT 1 cut(s) 79
TaiI ACGT 1 cut(s) 158
TaqI TCGA 1 cut(s) 65
TasI AATT 2 cut(s) 25, 39
TauI GCSGC 1 cut(s) 95
TseI GCWGC 2 cut(s) 49, 89
TspDTI ATGAA 3 cut(s) 17, 18, 171
XapI RAATTY 1 cut(s) 25
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.