Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

N/A

Physical Location & Seq

Genomic Coordinates Forward (+)

26317467 .. 26319335

Gene Structure 1869 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G282200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 513 bp

ATGGAGCAGCAACAAGCCAAGACTTCTGCAGGGAACCACTCTCAGTCCGCAGCTAGTGGTTCAACTTCATCACCTGAAAATAAGTCTTCTCAGATGGAAACAATTCAATCTCCAAATCCAATTCCCAGCTCCACGGGAGATGCTGGTCCTTCTGACCCCAAGCAACTGAGGAGAATTCTAGCAAATCGGGAGGCGGCCCGACGAGCTCACTCTAGGAAGAAAGAGTACGAGAGAAAGCTCGAAAGAGAGGCCAAGGAGGCAGAAGAGAGGGTAGCAATGCTGGCTTCAAAAGTGGCTTTCCAACGAATGCATCTCACGATACTATCAGGGAAGAACAGCCAGATGAGGGAGACGCTGCAAGTTCTTGAGAATCACCAGGCTCACAAAGAAGCTGAGACTGAGGCACTGGTGAAGGAGAGAGAAACGCTTCTTCTCCTTCGGAGTTTGCAGCTGCAACAACAACAAGGCGGCAGCAGCCGCAGCAGCAATAATCCAAACAACGTGGATAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000976 GO:0000977 GO:0001012 GO:0001067 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0008150 GO:0009889 GO:0009891 GO:0009893 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:1901363 GO:1902680 GO:1903506 GO:1903508 GO:1990837 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04010 ko04022 ko04137 ko04141 ko04151 ko04210 ko04211 ko04212 ko04214 ko04261 ko04668 ko04720 ko04722 ko04725 ko04728 ko04911 ko04912 ko04915 ko04918 ko04922 ko04925 ko04926 ko04927 ko04932 ko04934 ko05030 ko05031 ko05034 ko05161 ko05166 ko05203 ko05215 map04010 map04022 map04137 map04141 map04151 map04210 map04211 map04212 map04214 map04261 map04668 map04720 map04722 map04725 map04728 map04911 map04912 map04915 map04918 map04922 map04925 map04926 map04927 map04932 map04934 map05030 map05031 map05034 map05161 map05166 map05203 map05215

Pfam Domains

Protein Families

bZIP_1

Protein Analysis

171

Amino Acids

18.91

Weight (kDa)

9.64

Isoelectric Point (pI)

68.32

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AciI	CCGC	4 cut(s)	48, 194, 468, 478
AcsI	RAATTY	1 cut(s)	174
AfaI	GTAC	1 cut(s)	227
AfiI	CCNNNNNNNGG	1 cut(s)	346
AgsI	TTSAA	3 cut(s)	63, 107, 288
AjnI	CCWGG	1 cut(s)	375
AluBI	AGCT	6 cut(s)	53, 129, 206, 238, 392, 451
AluI	AGCT	6 cut(s)	53, 129, 206, 238, 392, 451
Alw21I	GWGCWC	1 cut(s)	208
Alw26I	GTCTC	2 cut(s)	344, 389
AoxI	GGCC	2 cut(s)	195, 249
ApeKI	GCWGC	9 cut(s)	7, 50, 355, 448, 451, 471, 474, 480, 483
ApoI	RAATTY	1 cut(s)	174
Asp700I	GAANNNNTTC	2 cut(s)	102, 426
AspS9I	GGNCC	2 cut(s)	146, 196
AsuHPI	GGTGA	3 cut(s)	63, 365, 421
AvaII	GGWCC	1 cut(s)	146
BanII	GRGCYC	1 cut(s)	208
BarI	GAAGNNNNNNTAC	2 cut(s)	209, 241
BbsI	GAAGAC	1 cut(s)	78
Bbv12I	GWGCWC	1 cut(s)	208
BbvI	GCAGC	9 cut(s)	19, 62, 342, 438, 460, 483, 486, 492, 495
BccI	CCATC	1 cut(s)	88
BciT130I	CCWGG	1 cut(s)	377
BcoDI	GTCTC	2 cut(s)	344, 389
BfaI	CTAG	3 cut(s)	54, 179, 213
BfmI	CTRYAG	1 cut(s)	27
BglI	GCCNNNNNGGC	1 cut(s)	257
Bme1390I	CCNGG	1 cut(s)	377
Bme18I	GGWCC	1 cut(s)	146
BmgT120I	GGNCC	2 cut(s)	146, 196
BmiI	GGNNCC	1 cut(s)	35
BmrFI	CCNGG	1 cut(s)	377
BmsI	GCATC	2 cut(s)	130, 319
BpiI	GAAGAC	1 cut(s)	78
BpuEI	CTTGAG	1 cut(s)	386
BsaJI	CCNNGG	2 cut(s)	132, 252
Bsc4I	CCNNNNNNNGG	1 cut(s)	346
Bse1I	ACTGG	1 cut(s)	411
Bse3DI	GCAATG	1 cut(s)	282
BseBI	CCWGG	1 cut(s)	377
BseDI	CCNNGG	2 cut(s)	132, 252
BseLI	CCNNNNNNNGG	1 cut(s)	346
BseMI	GCAATG	1 cut(s)	282
BseMII	CTCAG	5 cut(s)	56, 104, 158, 384, 390
BseNI	ACTGG	1 cut(s)	411
BseRI	GAGGAG	1 cut(s)	184
BseXI	GCAGC	9 cut(s)	19, 62, 342, 438, 460, 483, 486, 492, 495
BseYI	CCCAGC	1 cut(s)	125
BshFI	GGCC	2 cut(s)	197, 251
BsiHKAI	GWGCWC	1 cut(s)	208
BslI	CCNNNNNNNGG	1 cut(s)	346
BsmAI	GTCTC	2 cut(s)	344, 389
BsmBI	CGTCTC	1 cut(s)	344
BsmI	GAATGC	1 cut(s)	312
BsnI	GGCC	2 cut(s)	197, 251
Bsp1286I	GDGCHC	1 cut(s)	208
BspACI	CCGC	4 cut(s)	48, 194, 468, 478
BspANI	GGCC	2 cut(s)	197, 251
BspCNI	CTCAG	5 cut(s)	55, 103, 159, 385, 391
BspLI	GGNNCC	1 cut(s)	35
BspMAI	CTGCAG	1 cut(s)	31
BsrDI	GCAATG	1 cut(s)	282
BsrI	ACTGG	1 cut(s)	411
BssECI	CCNNGG	2 cut(s)	132, 252
BssT1I	CCWWGG	1 cut(s)	252
Bst2UI	CCWGG	1 cut(s)	377
Bst6I	CTCTTC	1 cut(s)	258
BstC8I	GCNNGC	1 cut(s)	282
BstDEI	CTNAG	5 cut(s)	42, 90, 167, 393, 399
BstDSI	CCRYGG	1 cut(s)	132
BstMAI	GTCTC	2 cut(s)	344, 389
BstMWI	GCNNNNNNNGC	7 cut(s)	203, 257, 281, 474, 477, 480, 483
BstNI	CCWGG	1 cut(s)	377
BstSCI	CCNGG	1 cut(s)	375
BstSFI	CTRYAG	1 cut(s)	27
BstV1I	GCAGC	9 cut(s)	19, 62, 342, 438, 460, 483, 486, 492, 495
BstV2I	GAAGAC	1 cut(s)	78
BsuRI	GGCC	2 cut(s)	197, 251
BtgI	CCRYGG	1 cut(s)	132
BtsIMutI	CAGTG	1 cut(s)	404
Cac8I	GCNNGC	1 cut(s)	282
Cfr13I	GGNCC	2 cut(s)	146, 196
CseI	GACGC	1 cut(s)	361
Csp6I	GTAC	1 cut(s)	226
CspCI	CAANNNNNGTGG	1 cut(s)	483
CviQI	GTAC	1 cut(s)	226
DdeI	CTNAG	5 cut(s)	42, 90, 167, 393, 399
Eam1104I	CTCTTC	1 cut(s)	258
EarI	CTCTTC	1 cut(s)	258
Ecl136II	GAGCTC	1 cut(s)	206
Eco130I	CCWWGG	1 cut(s)	252
Eco24I	GRGCYC	1 cut(s)	208
Eco47I	GGWCC	1 cut(s)	146
Eco53kI	GAGCTC	1 cut(s)	206
EcoICRI	GAGCTC	1 cut(s)	206
EcoRI	GAATTC	1 cut(s)	174
EcoRII	CCWGG	1 cut(s)	375
EcoT14I	CCWWGG	1 cut(s)	252
EcoT22I	ATGCAT	1 cut(s)	312
EcoT38I	GRGCYC	1 cut(s)	208
ErhI	CCWWGG	1 cut(s)	252
Esp3I	CGTCTC	1 cut(s)	344
FriOI	GRGCYC	1 cut(s)	208
FspBI	CTAG	3 cut(s)	54, 179, 213
GsaI	CCCAGC	1 cut(s)	129
HaeIII	GGCC	2 cut(s)	197, 251
HgaI	GACGC	1 cut(s)	361
HinfI	GANTC	1 cut(s)	370
HphI	GGTGA	3 cut(s)	63, 365, 421
Hpy188I	TCNGA	3 cut(s)	93, 154, 441
Hpy188III	TCNNGA	3 cut(s)	188, 316, 365
Hpy99I	CGWCG	1 cut(s)	204
HpyAV	CCTTC	3 cut(s)	159, 406, 446
HpyCH4IV	ACGT	1 cut(s)	501
HpyCH4V	TGCA	5 cut(s)	29, 310, 358, 448, 454
HpyF10VI	GCNNNNNNNGC	7 cut(s)	203, 257, 281, 474, 477, 480, 483
HpyF3I	CTNAG	5 cut(s)	42, 90, 167, 393, 399
HpySE526I	ACGT	1 cut(s)	501
LmnI	GCTCC	2 cut(s)	4, 134
Lsp1109I	GCAGC	9 cut(s)	19, 62, 342, 438, 460, 483, 486, 492, 495
LweI	GCATC	2 cut(s)	130, 319
MaeI	CTAG	3 cut(s)	54, 179, 213
MaeII	ACGT	1 cut(s)	501
MboII	GAAGA	5 cut(s)	78, 229, 275, 343, 422
MhlI	GDGCHC	1 cut(s)	208
MluCI	AATT	3 cut(s)	102, 120, 174
MmeI	TCCRAC	1 cut(s)	325
MnlI	CCTC	7 cut(s)	162, 184, 241, 250, 261, 339, 394
Mph1103I	ATGCAT	1 cut(s)	312
MroXI	GAANNNNTTC	2 cut(s)	102, 426
MspA1I	CMGCKG	1 cut(s)	451
MspR9I	CCNGG	1 cut(s)	377
Mva1269I	GAATGC	1 cut(s)	312
MvaI	CCWGG	1 cut(s)	377
MwoI	GCNNNNNNNGC	7 cut(s)	203, 257, 281, 474, 477, 480, 483
NlaIV	GGNNCC	1 cut(s)	35
NsiI	ATGCAT	1 cut(s)	312
PctI	GAATGC	1 cut(s)	312
PdmI	GAANNNNTTC	2 cut(s)	102, 426
PfeI	GAWTC	1 cut(s)	370
Psp124BI	GAGCTC	1 cut(s)	208
Psp6I	CCWGG	1 cut(s)	375
PspFI	CCCAGC	1 cut(s)	125
PspGI	CCWGG	1 cut(s)	375
PspN4I	GGNNCC	1 cut(s)	35
PspPI	GGNCC	2 cut(s)	146, 196
PstI	CTGCAG	1 cut(s)	31
PvuII	CAGCTG	1 cut(s)	451
RsaI	GTAC	1 cut(s)	227
RsaNI	GTAC	1 cut(s)	226
SacI	GAGCTC	1 cut(s)	208
Sau96I	GGNCC	2 cut(s)	146, 196
ScrFI	CCNGG	1 cut(s)	377
SduI	GDGCHC	1 cut(s)	208
SetI	ASST	8 cut(s)	55, 76, 131, 208, 240, 394, 453, 504
SfaNI	GCATC	2 cut(s)	130, 319
SfcI	CTRYAG	1 cut(s)	27
SinI	GGWCC	1 cut(s)	146
SmlI	CTYRAG	1 cut(s)	365
SmoI	CTYRAG	1 cut(s)	365
Sse9I	AATT	3 cut(s)	102, 120, 174
SsiI	CCGC	4 cut(s)	48, 194, 468, 478
SspMI	CTAG	3 cut(s)	54, 179, 213
SstI	GAGCTC	1 cut(s)	208
StyD4I	CCNGG	1 cut(s)	375
StyI	CCWWGG	1 cut(s)	252
TaiI	ACGT	1 cut(s)	504
TaqI	TCGA	1 cut(s)	240
TasI	AATT	3 cut(s)	102, 120, 174
TauI	GCSGC	3 cut(s)	197, 471, 480
TfiI	GAWTC	1 cut(s)	370
TscAI	CASTG	1 cut(s)	411
TseI	GCWGC	9 cut(s)	7, 50, 355, 448, 451, 471, 474, 480, 483
TspDTI	ATGAA	1 cut(s)	57
TspRI	CASTG	1 cut(s)	411
VpaK11BI	GGWCC	1 cut(s)	146
XapI	RAATTY	1 cut(s)	174
XmnI	GAANNNNTTC	2 cut(s)	102, 426
XspI	CTAG	3 cut(s)	54, 179, 213
Zsp2I	ATGCAT	1 cut(s)	312

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.