Prupe.6G287000_v2.0.a1

Protein of unknown function (DUF2985)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
N/A
Physical Location & Seq
Reverse (-)
26554037 .. 26556911
2875 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G287000.1_v2.0.a1.CDS.1

Sequence Viewer

Length: 1041 bp
ATGACAACAATGTGCTTACTTAGCGATGAAAGTCACAGAAGAGATGAAATCTCAGGATCTGTACCTTCTTCAAAATGCCAACGTTTGCGAGAATGTTTCAATGGGATTCTTACTCAGAAGATTGATTGGGCATCCATGAGTAAAATCTGCAAAAAGTGGATCAAGAACCCTCTGAATATGGCCATCCTTTTATGGATAAGTTGTGTTGCCGTCTCAGGAGCAATCCTATTTCTTGTGATGACGGGAATGTTAAACAGCGTCCTGCCCGAGAAGTCAGAGAGAAATGCCTGGTCTGAGATCAACAATCAAATCCTCACTGCTCTCTTTACTCTTATGGCTCTTTACCAACACCCAAAGAGGATCTACCACCTTGTACTTCTGTTGAGATGGAAGCCAAAGGATGTCTCATTGCTTAGAAAAATGTACTCTAGGAATGGTACTTACAAACCCCATGAATGGGCACACTTTATGGTGGTAGTTTTTTTACTCCATTTGAATTGCTTTGCTCAGTATGCCTTGTGTGGGCTTAACTTGGGATACAAAAGATCTGAGCGACCTGCTGTTGGTGTCGGTATCTGTCTTTCGGTTGCAATTGCTGCCCCTGCAATAGCAGGTGTGTACTGCATTGTTAGCTCCCTCGGGAAGGAGTATGAAGTTGATCATGATGCGCAGGATCATATTCCCACTAATGGCACAAGCCGGTCCAGCCACTCGATGATGAAGTCATTCAAGAGGACATTTTCATGTGCATCTAGAGATGGCCAAAGGATTTCTGAGAATGCACCTCAATGGAGAGGGGATGACAAGCCTGTGCTATCGCCCTTACCGCGTGAAAGTGGAATTACTGAATATAGATTTCATCAAACTTCTCTACTTTGGAAGAAGCCTACAAGTCCAAGCACACTTCAAAAAGATTACCGTAGTCTAGATAGACAGATCCCCAAGGTGAAAGAGGAATCTACAATGGAGCCCCCTGTACCATTGATTTTGCAGAGGGAAGAGAATATCCAACCAAAGACACAAAAAGGAAGGAATTATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF2985 PLAC8

Protein Analysis

347

Amino Acids

39.44

Weight (kDa)

9.44

Isoelectric Point (pI)

51.02

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 602
Acc16I TGCGCA 1 cut(s) 669
Acc36I ACCTGC 2 cut(s) 565, 602
AccII CGCG 1 cut(s) 829
AciI CCGC 1 cut(s) 827
AclI AACGTT 1 cut(s) 82
AclWI GGATC 5 cut(s) 64, 167, 368, 681, 931
AcoI YGGCCR 2 cut(s) 180, 760
AfaI GTAC 6 cut(s) 63, 375, 425, 439, 620, 978
AfiI CCNNNNNNNGG 6 cut(s) 456, 457, 522, 563, 643, 689
AgsI TTSAA 5 cut(s) 72, 100, 496, 730, 908
AjnI CCWGG 1 cut(s) 287
AluBI AGCT 1 cut(s) 633
AluI AGCT 1 cut(s) 633
Alw26I GTCTC 2 cut(s) 217, 409
AlwI GGATC 5 cut(s) 64, 167, 368, 681, 931
AlwNI CAGNNNCTG 1 cut(s) 59
Ama87I CYCGRG 2 cut(s) 266, 638
AoxI GGCC 2 cut(s) 180, 760
ApeKI GCWGC 1 cut(s) 596
Asp700I GAANNNNTTC 1 cut(s) 725
AspLEI GCGC 1 cut(s) 670
AspS9I GGNCC 1 cut(s) 702
AsuHPI GGTGA 1 cut(s) 958
AvaI CYCGRG 2 cut(s) 266, 638
AvaII GGWCC 1 cut(s) 702
BaeGI GKGCMC 1 cut(s) 463
BalI TGGCCA 2 cut(s) 182, 762
BanII GRGCYC 1 cut(s) 972
BbvI GCAGC 1 cut(s) 583
BccI CCATC 3 cut(s) 191, 381, 752
BceAI ACGGC 1 cut(s) 194
BciT130I CCWGG 1 cut(s) 289
BciVI GTATCC 1 cut(s) 530
BclI TGATCA 1 cut(s) 658
BcoDI GTCTC 2 cut(s) 217, 409
BfaI CTAG 3 cut(s) 429, 753, 926
BfuAI ACCTGC 2 cut(s) 565, 602
BfuI GTATCC 1 cut(s) 530
BglII AGATCT 1 cut(s) 545
BisI GCNGC 1 cut(s) 597
BlsI GCNGC 1 cut(s) 598
Bme1390I CCNGG 1 cut(s) 289
Bme18I GGWCC 1 cut(s) 702
BmeT110I CYCGRG 2 cut(s) 266, 638
BmgT120I GGNCC 1 cut(s) 702
BmiI GGNNCC 1 cut(s) 969
BmrFI CCNGG 1 cut(s) 289
BmsI GCATC 3 cut(s) 140, 655, 758
BsaJI CCNNGG 2 cut(s) 637, 942
Bsc4I CCNNNNNNNGG 6 cut(s) 456, 457, 522, 563, 643, 689
Bse118I RCCGGY 1 cut(s) 699
Bse3DI GCAATG 1 cut(s) 407
BseBI CCWGG 1 cut(s) 289
BseDI CCNNGG 2 cut(s) 637, 942
BseGI GGATG 4 cut(s) 131, 183, 406, 805
BseLI CCNNNNNNNGG 6 cut(s) 456, 457, 522, 563, 643, 689
BseMI GCAATG 1 cut(s) 407
BseMII CTCAG 7 cut(s) 66, 128, 228, 285, 521, 540, 765
BseSI GKGCMC 1 cut(s) 463
BseXI GCAGC 1 cut(s) 583
Bsh1236I CGCG 1 cut(s) 829
BshFI GGCC 2 cut(s) 182, 762
BsiHKCI CYCGRG 2 cut(s) 266, 638
BsiSI CCGG 1 cut(s) 700
BslI CCNNNNNNNGG 6 cut(s) 456, 457, 522, 563, 643, 689
BsmAI GTCTC 2 cut(s) 217, 409
BsmBI CGTCTC 1 cut(s) 217
BsmI GAATGC 1 cut(s) 784
BsnI GGCC 2 cut(s) 182, 762
BsoBI CYCGRG 2 cut(s) 266, 638
Bsp1286I GDGCHC 2 cut(s) 463, 972
Bsp143I GATC 8 cut(s) 56, 159, 297, 360, 545, 658, 673, 936
BspACI CCGC 1 cut(s) 827
BspANI GGCC 2 cut(s) 182, 762
BspCNI CTCAG 7 cut(s) 65, 127, 227, 286, 520, 541, 766
BspFNI CGCG 1 cut(s) 829
BspHI TCATGA 1 cut(s) 661
BspLI GGNNCC 1 cut(s) 969
BspMI ACCTGC 2 cut(s) 565, 602
BspPI GGATC 5 cut(s) 64, 167, 368, 681, 931
BsrDI GCAATG 1 cut(s) 407
BsrFI RCCGGY 1 cut(s) 699
BssAI RCCGGY 1 cut(s) 699
BssECI CCNNGG 2 cut(s) 637, 942
BssMI GATC 8 cut(s) 56, 159, 297, 360, 545, 658, 673, 936
BssT1I CCWWGG 1 cut(s) 942
Bst2UI CCWGG 1 cut(s) 289
Bst4CI ACNGT 1 cut(s) 920
Bst6I CTCTTC 2 cut(s) 34, 993
BstAPI GCANNNNNTGC 1 cut(s) 596
BstDEI CTNAG 9 cut(s) 20, 52, 114, 214, 294, 413, 507, 549, 774
BstENI CCTNNNNNAGG 1 cut(s) 641
BstF5I GGATG 4 cut(s) 131, 183, 406, 805
BstFNI CGCG 1 cut(s) 829
BstHHI GCGC 1 cut(s) 670
BstKTI GATC 8 cut(s) 59, 162, 300, 363, 548, 661, 676, 939
BstMAI GTCTC 2 cut(s) 217, 409
BstMBI GATC 8 cut(s) 56, 159, 297, 360, 545, 658, 673, 936
BstMWI GCNNNNNNNGC 7 cut(s) 21, 512, 596, 602, 630, 705, 826
BstNI CCWGG 1 cut(s) 289
BstSCI CCNGG 1 cut(s) 287
BstSLI GKGCMC 1 cut(s) 463
BstUI CGCG 1 cut(s) 829
BstV1I GCAGC 1 cut(s) 583
BstX2I RGATCY 4 cut(s) 56, 360, 545, 936
BstYI RGATCY 4 cut(s) 56, 360, 545, 936
BsuI GTATCC 1 cut(s) 530
BsuRI GGCC 2 cut(s) 182, 762
BtgZI GCGATG 1 cut(s) 39
BtsCI GGATG 4 cut(s) 131, 183, 406, 805
BtsI GCAGTG 1 cut(s) 315
BtsIMutI CAGTG 1 cut(s) 315
BveI ACCTGC 2 cut(s) 565, 602
CaiI CAGNNNCTG 1 cut(s) 59
CciI TCATGA 1 cut(s) 661
CfoI GCGC 1 cut(s) 670
Cfr10I RCCGGY 1 cut(s) 699
Cfr13I GGNCC 1 cut(s) 702
CseI GACGC 1 cut(s) 247
Csp6I GTAC 6 cut(s) 62, 374, 424, 438, 619, 977
CviAII CATG 4 cut(s) 136, 452, 662, 744
CviQI GTAC 6 cut(s) 62, 374, 424, 438, 619, 977
DdeI CTNAG 9 cut(s) 20, 52, 114, 214, 294, 413, 507, 549, 774
DpnI GATC 8 cut(s) 58, 161, 299, 362, 547, 660, 675, 938
DpnII GATC 8 cut(s) 56, 159, 297, 360, 545, 658, 673, 936
EaeI YGGCCR 2 cut(s) 180, 760
Eam1104I CTCTTC 2 cut(s) 34, 993
EarI CTCTTC 2 cut(s) 34, 993
Eco130I CCWWGG 1 cut(s) 942
Eco24I GRGCYC 1 cut(s) 972
Eco47I GGWCC 1 cut(s) 702
Eco88I CYCGRG 2 cut(s) 266, 638
EcoNI CCTNNNNNAGG 1 cut(s) 641
EcoRII CCWGG 1 cut(s) 287
EcoT14I CCWWGG 1 cut(s) 942
EcoT38I GRGCYC 1 cut(s) 972
ErhI CCWWGG 1 cut(s) 942
Esp3I CGTCTC 1 cut(s) 217
FaeI CATG 4 cut(s) 139, 455, 665, 747
FatI CATG 4 cut(s) 135, 451, 661, 743
FbaI TGATCA 1 cut(s) 658
Fnu4HI GCNGC 1 cut(s) 597
FokI GGATG 4 cut(s) 118, 170, 413, 812
FriOI GRGCYC 1 cut(s) 972
Fsp4HI GCNGC 1 cut(s) 597
FspBI CTAG 3 cut(s) 429, 753, 926
FspI TGCGCA 1 cut(s) 669
GlaI GCGC 1 cut(s) 669
GluI GCNGC 1 cut(s) 597
HaeIII GGCC 2 cut(s) 182, 762
HapII CCGG 1 cut(s) 700
HgaI GACGC 1 cut(s) 247
HhaI GCGC 1 cut(s) 670
Hin1II CATG 4 cut(s) 139, 455, 665, 747
Hin6I GCGC 1 cut(s) 668
HinP1I GCGC 1 cut(s) 668
HinfI GANTC 2 cut(s) 106, 956
HpaII CCGG 1 cut(s) 700
HphI GGTGA 1 cut(s) 958
Hpy166II GTNNAC 1 cut(s) 619
Hpy188I TCNGA 6 cut(s) 117, 174, 277, 295, 550, 775
Hpy188III TCNNGA 8 cut(s) 54, 163, 216, 640, 662, 730, 753, 926
Hpy8I GTNNAC 1 cut(s) 619
HpyAV CCTTC 3 cut(s) 75, 637, 1023
HpyCH4III ACNGT 1 cut(s) 920
HpyCH4IV ACGT 1 cut(s) 82
HpyCH4V TGCA 7 cut(s) 150, 590, 605, 624, 749, 782, 991
HpyF10VI GCNNNNNNNGC 7 cut(s) 21, 512, 596, 602, 630, 705, 826
HpyF3I CTNAG 9 cut(s) 20, 52, 114, 214, 294, 413, 507, 549, 774
HpySE526I ACGT 1 cut(s) 82
Hsp92II CATG 4 cut(s) 139, 455, 665, 747
HspAI GCGC 1 cut(s) 668
Ksp22I TGATCA 1 cut(s) 658
Kzo9I GATC 8 cut(s) 56, 159, 297, 360, 545, 658, 673, 936
LmnI GCTCC 3 cut(s) 218, 638, 967
Lsp1109I GCAGC 1 cut(s) 583
LweI GCATC 3 cut(s) 140, 655, 758
MaeI CTAG 3 cut(s) 429, 753, 926
MaeII ACGT 1 cut(s) 82
MaeIII GTNAC 1 cut(s) 32
MalI GATC 8 cut(s) 58, 161, 299, 362, 547, 660, 675, 938
MboI GATC 8 cut(s) 56, 159, 297, 360, 545, 658, 673, 936
MboII GAAGA 5 cut(s) 51, 60, 130, 892, 1010
MfeI CAATTG 1 cut(s) 591
MflI RGATCY 4 cut(s) 56, 360, 545, 936
MhlI GDGCHC 2 cut(s) 463, 972
MlsI TGGCCA 2 cut(s) 182, 762
MluCI AATT 4 cut(s) 496, 591, 840, 1033
MluNI TGGCCA 2 cut(s) 182, 762
MmeI TCCRAC 1 cut(s) 1033
MnlI CCTC 9 cut(s) 180, 323, 351, 647, 726, 788, 795, 946, 987
Mox20I TGGCCA 2 cut(s) 182, 762
MroXI GAANNNNTTC 1 cut(s) 725
MscI TGGCCA 2 cut(s) 182, 762
MseI TTAA 2 cut(s) 251, 528
MslI CAYNNNNRTG 2 cut(s) 742, 787
Msp20I TGGCCA 2 cut(s) 182, 762
MspI CCGG 1 cut(s) 700
MspR9I CCNGG 1 cut(s) 289
MunI CAATTG 1 cut(s) 591
Mva1269I GAATGC 1 cut(s) 784
MvaI CCWGG 1 cut(s) 289
MvnI CGCG 1 cut(s) 829
MwoI GCNNNNNNNGC 7 cut(s) 21, 512, 596, 602, 630, 705, 826
NdeII GATC 8 cut(s) 56, 159, 297, 360, 545, 658, 673, 936
NlaIII CATG 4 cut(s) 139, 455, 665, 747
NlaIV GGNNCC 1 cut(s) 969
NmuCI GTSAC 1 cut(s) 32
NsbI TGCGCA 1 cut(s) 669
PagI TCATGA 1 cut(s) 661
PaqCI CACCTGC 1 cut(s) 602
PctI GAATGC 1 cut(s) 784
PdmI GAANNNNTTC 1 cut(s) 725
PfeI GAWTC 2 cut(s) 106, 956
PkrI GCNGC 1 cut(s) 598
Psp1406I AACGTT 1 cut(s) 82
Psp6I CCWGG 1 cut(s) 287
PspGI CCWGG 1 cut(s) 287
PspN4I GGNNCC 1 cut(s) 969
PspPI GGNCC 1 cut(s) 702
PstNI CAGNNNCTG 1 cut(s) 59
PsuI RGATCY 4 cut(s) 56, 360, 545, 936
RsaI GTAC 6 cut(s) 63, 375, 425, 439, 620, 978
RsaNI GTAC 6 cut(s) 62, 374, 424, 438, 619, 977
RseI CAYNNNNRTG 2 cut(s) 742, 787
SaqAI TTAA 2 cut(s) 251, 528
SatI GCNGC 1 cut(s) 597
Sau3AI GATC 8 cut(s) 56, 159, 297, 360, 545, 658, 673, 936
Sau96I GGNCC 1 cut(s) 702
ScrFI CCNGG 1 cut(s) 289
SduI GDGCHC 2 cut(s) 463, 972
SetI ASST 8 cut(s) 67, 85, 372, 559, 616, 635, 787, 948
SfaNI GCATC 3 cut(s) 140, 655, 758
SinI GGWCC 1 cut(s) 702
SmiMI CAYNNNNRTG 2 cut(s) 742, 787
Sse9I AATT 4 cut(s) 496, 591, 840, 1033
SsiI CCGC 1 cut(s) 827
SspMI CTAG 3 cut(s) 429, 753, 926
StyD4I CCNGG 1 cut(s) 287
StyI CCWWGG 1 cut(s) 942
TaaI ACNGT 1 cut(s) 920
TaiI ACGT 1 cut(s) 85
TaqI TCGA 1 cut(s) 713
TasI AATT 4 cut(s) 496, 591, 840, 1033
TatI WGTACW 3 cut(s) 373, 423, 618
TfiI GAWTC 2 cut(s) 106, 956
Tru1I TTAA 2 cut(s) 251, 528
Tru9I TTAA 2 cut(s) 251, 528
TscAI CASTG 1 cut(s) 322
TseFI GTSAC 1 cut(s) 32
TseI GCWGC 1 cut(s) 596
Tsp45I GTSAC 1 cut(s) 32
TspDTI ATGAA 7 cut(s) 42, 60, 468, 666, 732, 734, 848
TspRI CASTG 1 cut(s) 322
VpaK11BI GGWCC 1 cut(s) 702
XagI CCTNNNNNAGG 1 cut(s) 641
XbaI TCTAGA 2 cut(s) 752, 925
XmnI GAANNNNTTC 1 cut(s) 725
XspI CTAG 3 cut(s) 429, 753, 926
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.