Prupe.6G314100_v2.0.a1

Protein of unknown function (DUF 659)

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
N/A
Physical Location & Seq
Reverse (-)
28066437 .. 28068860
2424 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G314100.1_v2.0.a1.CDS.1

Sequence Viewer

Length: 372 bp
ATGACTTCTGTGAATTATTTCCCAATCTTAGCCCCATGCTATAAAAGGTCGGTCAATAGGGATACATTCATTCGTAAAATCATTTATACTTTGCTTTTGTTCTTCATATATAAGCTCTATGCGCGAAGGGAGAGGAAAGTGTTCTGTGCGTCTGAGAACTCTGCTGAAGGGCTCTTGTTGTTGCCACCACCTAGTAAGAGGAAAGTCAAAAGCAAGTCCATAAGAGCGATGCTTATGGATGAAGATGATGAGATAGATAAAGATCCTTCAACATTTGATAGTGGGAAATATCCTTTTCATATTGATATAGTTGATCAATATGATAGTGATGCTAGTTTGAATGATATTAGTGTTGAGGAGTGGGATGAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

124

Amino Acids

14.4

Weight (kDa)

5.24

Isoelectric Point (pI)

48.57

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 124
AclWI GGATC 1 cut(s) 257
AcuI CTGAAG 1 cut(s) 186
AgsI TTSAA 2 cut(s) 270, 340
AluBI AGCT 1 cut(s) 115
AluI AGCT 1 cut(s) 115
AlwI GGATC 1 cut(s) 257
Asp700I GAANNNNTTC 2 cut(s) 17, 140
AspLEI GCGC 1 cut(s) 124
BanII GRGCYC 1 cut(s) 174
BciVI GTATCC 1 cut(s) 55
BclI TGATCA 1 cut(s) 313
BfaI CTAG 2 cut(s) 192, 333
BfuI GTATCC 1 cut(s) 55
BmsI GCATC 2 cut(s) 219, 319
BsaBI GATNNNNATC 1 cut(s) 261
Bse8I GATNNNNATC 1 cut(s) 261
BseGI GGATG 2 cut(s) 244, 370
BseJI GATNNNNATC 1 cut(s) 261
BseMII CTCAG 1 cut(s) 144
BseRI GAGGAG 1 cut(s) 371
Bsh1236I CGCG 1 cut(s) 124
Bsp1286I GDGCHC 1 cut(s) 174
Bsp143I GATC 2 cut(s) 262, 313
BspCNI CTCAG 1 cut(s) 145
BspFNI CGCG 1 cut(s) 124
BspPI GGATC 1 cut(s) 257
BssMI GATC 2 cut(s) 262, 313
BstDEI CTNAG 2 cut(s) 28, 153
BstF5I GGATG 2 cut(s) 244, 370
BstFNI CGCG 1 cut(s) 124
BstHHI GCGC 1 cut(s) 124
BstKTI GATC 2 cut(s) 265, 316
BstMBI GATC 2 cut(s) 262, 313
BstMWI GCNNNNNNNGC 1 cut(s) 121
BstUI CGCG 1 cut(s) 124
BstX2I RGATCY 1 cut(s) 262
BstYI RGATCY 1 cut(s) 262
BsuI GTATCC 1 cut(s) 55
BtgZI GCGATG 1 cut(s) 242
BtsCI GGATG 2 cut(s) 244, 370
CfoI GCGC 1 cut(s) 124
CseI GACGC 1 cut(s) 138
CviAII CATG 1 cut(s) 36
CviJI RGCY 3 cut(s) 32, 115, 172
CviKI_1 RGCY 3 cut(s) 32, 115, 172
DdeI CTNAG 2 cut(s) 28, 153
DpnI GATC 2 cut(s) 264, 315
DpnII GATC 2 cut(s) 262, 313
Eco24I GRGCYC 1 cut(s) 174
Eco57I CTGAAG 1 cut(s) 186
EcoT38I GRGCYC 1 cut(s) 174
FaeI CATG 1 cut(s) 39
FatI CATG 1 cut(s) 35
FbaI TGATCA 1 cut(s) 313
FokI GGATG 1 cut(s) 251
FriOI GRGCYC 1 cut(s) 174
FspBI CTAG 2 cut(s) 192, 333
GlaI GCGC 1 cut(s) 123
HgaI GACGC 1 cut(s) 138
HhaI GCGC 1 cut(s) 124
Hin1II CATG 1 cut(s) 39
Hin6I GCGC 1 cut(s) 122
HinP1I GCGC 1 cut(s) 122
Hpy188I TCNGA 1 cut(s) 154
HpyAV CCTTC 3 cut(s) 120, 161, 276
HpyF10VI GCNNNNNNNGC 1 cut(s) 121
HpyF3I CTNAG 2 cut(s) 28, 153
Hsp92II CATG 1 cut(s) 39
HspAI GCGC 1 cut(s) 122
Ksp22I TGATCA 1 cut(s) 313
Kzo9I GATC 2 cut(s) 262, 313
LweI GCATC 2 cut(s) 219, 319
MaeI CTAG 2 cut(s) 192, 333
MalI GATC 2 cut(s) 264, 315
MboI GATC 2 cut(s) 262, 313
MboII GAAGA 2 cut(s) 94, 254
MflI RGATCY 1 cut(s) 262
MhlI GDGCHC 1 cut(s) 174
MluCI AATT 1 cut(s) 13
MnlI CCTC 3 cut(s) 126, 192, 349
MroXI GAANNNNTTC 2 cut(s) 17, 140
MvnI CGCG 1 cut(s) 124
MwoI GCNNNNNNNGC 1 cut(s) 121
NdeII GATC 2 cut(s) 262, 313
NlaIII CATG 1 cut(s) 39
PdmI GAANNNNTTC 2 cut(s) 17, 140
PsuI RGATCY 1 cut(s) 262
Sau3AI GATC 2 cut(s) 262, 313
SduI GDGCHC 1 cut(s) 174
SetI ASST 3 cut(s) 50, 117, 193
SfaNI GCATC 2 cut(s) 219, 319
SgeI CNNG 6 cut(s) 48, 135, 187, 204, 226, 345
Sse9I AATT 1 cut(s) 13
SspMI CTAG 2 cut(s) 192, 333
TaqII GACCGA 1 cut(s) 40
TasI AATT 1 cut(s) 13
TspDTI ATGAA 4 cut(s) 58, 94, 255, 287
XmnI GAANNNNTTC 2 cut(s) 17, 140
XspI CTAG 2 cut(s) 192, 333
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.