Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

N/A

Physical Location & Seq

Genomic Coordinates Reverse (-)

29497598 .. 29503580

Gene Structure 5983 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G342000.1_v2.0.a1.CDS.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2256 bp

ATGGTGACTCGGAGCTTTCAGGTTCACCACAATGACTCCACTTTCGGCGTTGACTTTGATACGGACGATGGCCTCGAAGTTTTCAAACTCCAGCTCTTATCTCTCACCTCCATCCCTCCGGACGAGCAAAAGTTAATTGGAATGGATGAAAATCGTGTCGTTTCGGATAAGTCCGACCTCGTTGCTATCTCTGAGAAGCTCCGACTGGTTTCGATCAATGAGGAGCAACAAGAAACTTCAACTGCTGAAAACGATGAATTGCTGAAATCCGATGAGGAATTGGCCAGAATGTTGCAGGCAGAGGAGTGCGCTGCCCCTGAAGATAATGGAAAGGTTGAGGGAAGACTACGCACTTATGTCAGTATAGTTCTCATGTATGAGGACCTGGAACGCCGGGAGGCTGCTCGGAAAACAGTTCCTGTTGAAGAGCTGGAGGAGAAAGCATTGGTCAGTTTGGCCAAGGAGGGGAATTTAACTCCATCAAAAAATGAACAAGACCATGCTTTCCTGCTGCAGCTGCTTTTCTGGTTCAAACAATCTTTCAGGTGGGTAAATGCTCCTCCCTGTGATGGTTGCGGCAAAGAAACCGTACTTCATGGCAAGGTGGATCCACTTCCTTCAGAAATTCGACATGGAGCTTCTCGAGTTGAGATCTATGGATGCAATTTTTGCCCTATAGGGTCTCGTTTCCCACGCTACAATGATCCATTGAAGCTTGTGGAAACAAGAAGTGGGCGTTGTGGGGAATGGGCCAATTGCTTTACGCTTTATTGCCGAGCTTTTGGATATGAATCCCGCCTGATCTTGGATTTCACAAATCATGTTTGGACAGAGTGCTTCTCACAATCTTTGGGAAGATGGTTGCATCTCGATCCTTGTGAAGGAGTGTATGACAATCCAATGTTATATGAAAGCGGGTGGAACAAGAAATTAACTTACGTAATTGCCATCACAAAAGATGGTGTTTGTGATGTAACCAAACGATATACGAGGAAGTGGCATGAGGTTATTTCTCGACGTAACATCATTACAGAGACTGCACTGTCAGCTGTGCTTGCTAATGTAACAAAAGACTGCCGAAGAGGGTTTACCTTTCAAGTGCTTTCTGTACTTGAAGACCGTGATGAGAAGGAGAGGCAAGAACTCGAAAGAGGTTTACATTCTACAGACAATGCCTCAACCTCATTACCAGGGAGACTAAATGGGGAAAAGGAGAAGGCTGTAGAGATCCCAAGAGTTAAACTTGGAAGTCAGGGATTTGAGGTCTCAAAAGTGGGGTTTGGATGCATGGGCCTGAGTGGGGTCTACAACTCGCCTGTCCCTGATGAGGATGGCATCTCCATAATAAAACATGCTTTCAGTAAAGGAATCACTTTCTTTGACACAGCTGATGTATATGGACCTCATTTGAATGAACTTCTTCTTGGGAAGGCCTTGAAGCAGTTGCCAAGGGAAAAAGTTCAAGTGGCCACAAAGTTTGGTATTACTGGAAGACCTGATCCTCCAAGAATTACAGTGAAGGGCACTCCTGAGTATGTCCGCTCATGCTGTGAGGCTAGCCTCAATCGTCTTGGCGTCGACTACATTGATCTGTATTATCAGCACCGGGTGGACACAACGGTGCCTATAGAGGAAACCGTAGGTGAGCTCAAGAAACTGGTGGAAGAAGGAAAAGTAAAGTATATTGGGTTATCTGAAGCCAGCCCGGACACAATAAGGAGGGCACATGCAGTTCATCCCATCACGGCTTTACAAATTGAGTGGTCCCTCTGGACTCGTGATATTGAGGAAGAGATTGTTCCACTTTGCAGGGAGCTTGGCATTGGAATAGTTCCATATAGTCCTCTTGGTCGTGGGTTTTTCGGAGGCAGAGGAGTTGTGGAAAGTGTGGCTGCAAATAGTTTTGTGGCCAACCATCCCCGGTTTGTAGGAGAGAACATAGACAAGAACAAGAATATTTACCATCGAATAGAAAGCCTTGCTAAAAAGCATCAAACCTCTCCTGTTCAACTAGCACTATCATGGGTTCTCCACCAAGGAAATGATGTTGTGCCTATCCCGGGGACAACAAAGATTAAGAACCTGGATTCAAATATTGGCTCCTTGGGGGTGAAACTCAAGGAAGAAGACATCAAAGAAATTTCTGATGCTGTACCAATTAACCAAGCCGCAGGTGATAGCGATAGCGGAATCCTGATGCAGTGGCAATGGAAGCTCGCCAACACTCCTCCAAAACATTCAAAGTCTGAGCTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000224 GO:0000302 GO:0001101 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006464 GO:0006508 GO:0006515 GO:0006516 GO:0006517 GO:0006807 GO:0006950 GO:0006979 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009100 GO:0009636 GO:0009719 GO:0009725 GO:0009751 GO:0009987 GO:0010033 GO:0010035 GO:0010188 GO:0010193 GO:0014070 GO:0016787 GO:0016810 GO:0016811 GO:0019538 GO:0030163 GO:0036211 GO:0042221 GO:0042493 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0046677 GO:0050896 GO:0051603 GO:0071704 GO:1901135 GO:1901136 GO:1901564 GO:1901565 GO:1901575 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko04141 map04141

Pfam Domains

Protein Families

Rad4 Transglut_core

Protein Analysis

752

Amino Acids

84.33

Weight (kDa)

5.65

Isoelectric Point (pI)

40.85

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2162
AasI	GACNNNNNNGTC	1 cut(s)	1042
Acc36I	ACCTGC	1 cut(s)	2162
AccB1I	GGYRCC	1 cut(s)	1621
AccBSI	CCGCTC	1 cut(s)	1542
AccI	GTMKAC	2 cut(s)	1305, 1578
AccIII	TCCGGA	1 cut(s)	118
AciI	CCGC	6 cut(s)	576, 796, 915, 1540, 2169, 2187
AclWI	GGATC	6 cut(s)	602, 615, 698, 866, 1222, 1493
AcoI	YGGCCR	4 cut(s)	282, 456, 1467, 1908
AcsI	RAATTY	3 cut(s)	469, 624, 2139
AcuI	CTGAAG	3 cut(s)	339, 603, 1716
AcyI	GRCGYC	1 cut(s)	1575
AdeI	CACNNNGTG	1 cut(s)	1609
AfaI	GTAC	3 cut(s)	591, 1110, 2154
AfiI	CCNNNNNNNGG	7 cut(s)	465, 569, 805, 881, 1300, 1327, 2060
AjnI	CCWGG	3 cut(s)	384, 1189, 2082
AjuI	GAANNNNNNNTTGG	2 cut(s)	1407, 1439
AleI	CACNNNNGTG	1 cut(s)	1619
Alw21I	GWGCWC	1 cut(s)	1650
Alw26I	GTCTC	4 cut(s)	687, 1028, 1189, 1270
AlwI	GGATC	6 cut(s)	602, 615, 698, 866, 1222, 1493
AlwNI	CAGNNNCTG	2 cut(s)	419, 1037
Ama87I	CYCGRG	2 cut(s)	642, 2059
Aor13HI	TCCGGA	1 cut(s)	118
AoxI	GGCC	8 cut(s)	70, 282, 456, 750, 1291, 1431, 1467, 1908
ApeKI	GCWGC	6 cut(s)	311, 401, 511, 514, 517, 1892
ApoI	RAATTY	3 cut(s)	469, 624, 2139
ArsI	GACNNNNNNTTYG	2 cut(s)	26, 58
Asp700I	GAANNNNTTC	2 cut(s)	1419, 1458
AspLEI	GCGC	1 cut(s)	311
AspS9I	GGNCC	5 cut(s)	382, 750, 1291, 1400, 1764
AsuC2I	CCSGG	6 cut(s)	395, 1607, 1706, 1921, 2060, 2061
AsuHPI	GGTGA	6 cut(s)	16, 17, 97, 1655, 2122, 2186
AsuNHI	GCTAGC	1 cut(s)	1556
AvaI	CYCGRG	2 cut(s)	642, 2059
AvaII	GGWCC	3 cut(s)	382, 1400, 1764
BaeGI	GKGCMC	2 cut(s)	1526, 1726
BalI	TGGCCA	4 cut(s)	284, 458, 1469, 1910
BamHI	GGATCC	1 cut(s)	607
BanI	GGYRCC	1 cut(s)	1621
BanII	GRGCYC	1 cut(s)	1650
BarI	GAAGNNNNNNTAC	2 cut(s)	1072, 1104
BauI	CACGAG	1 cut(s)	1776
BbsI	GAAGAC	4 cut(s)	349, 1122, 1498, 2133
Bbv12I	GWGCWC	1 cut(s)	1650
BbvI	GCAGC	6 cut(s)	298, 388, 498, 504, 526, 1879
BceAI	ACGGC	1 cut(s)	1761
BcgI	CGANNNNNNTGC	2 cut(s)	164, 198
BciT130I	CCWGG	3 cut(s)	386, 1191, 2084
BcnI	CCSGG	6 cut(s)	395, 1607, 1706, 1921, 2060, 2061
BcoDI	GTCTC	4 cut(s)	687, 1028, 1189, 1270
BfaI	CTAG	2 cut(s)	1557, 2012
BfmI	CTRYAG	5 cut(s)	512, 675, 1164, 1221, 1626
BfuAI	ACCTGC	1 cut(s)	2162
BglII	AGATCT	1 cut(s)	651
BisI	GCNGC	8 cut(s)	312, 402, 512, 515, 518, 577, 1893, 2169
BlsI	GCNGC	8 cut(s)	313, 403, 513, 516, 519, 578, 1894, 2170
Bme1390I	CCNGG	9 cut(s)	386, 395, 1191, 1607, 1706, 1921, 2060, 2061, 2084
Bme18I	GGWCC	3 cut(s)	382, 1400, 1764
BmeT110I	CYCGRG	2 cut(s)	642, 2059
BmgT120I	GGNCC	5 cut(s)	382, 750, 1291, 1400, 1764
BmiI	GGNNCC	4 cut(s)	609, 1623, 1766, 2101
BmrFI	CCNGG	9 cut(s)	386, 395, 1191, 1607, 1706, 1921, 2060, 2061, 2084
BmsI	GCATC	7 cut(s)	650, 874, 1274, 1344, 1999, 2137, 2187
BmtI	GCTAGC	1 cut(s)	1560
BpiI	GAAGAC	4 cut(s)	349, 1122, 1498, 2133
BplI	GAGNNNNNCTC	2 cut(s)	824, 856
BpmI	CTGGAG	2 cut(s)	74, 452
BpuEI	CTTGAG	2 cut(s)	1634, 2102
BpuMI	CCSGG	6 cut(s)	395, 1607, 1706, 1921, 2060, 2061
BsaAI	YACGTR	1 cut(s)	940
BsaBI	GATNNNNATC	2 cut(s)	150, 790
BsaHI	GRCGYC	1 cut(s)	1575
BsaI	GGTCTC	2 cut(s)	687, 1270
BsaJI	CCNNGG	8 cut(s)	459, 1190, 1448, 1919, 2035, 2059, 2060, 2103
BsaWI	WCCGGW	1 cut(s)	118
BsaXI	ACNNNNNCTCC	2 cut(s)	20, 50
Bsc4I	CCNNNNNNNGG	7 cut(s)	465, 569, 805, 881, 1300, 1327, 2060
Bse1I	ACTGG	3 cut(s)	210, 1492, 1662
Bse3DI	GCAATG	1 cut(s)	2213
Bse8I	GATNNNNATC	2 cut(s)	150, 790
BseAI	TCCGGA	1 cut(s)	118
BseBI	CCWGG	3 cut(s)	386, 1191, 2084
BseDI	CCNNGG	8 cut(s)	459, 1190, 1448, 1919, 2035, 2059, 2060, 2103
BseGI	GGATG	7 cut(s)	111, 151, 665, 1289, 1336, 1735, 1915
BseJI	GATNNNNATC	2 cut(s)	150, 790
BseLI	CCNNNNNNNGG	7 cut(s)	465, 569, 805, 881, 1300, 1327, 2060
BseMI	GCAATG	1 cut(s)	2213
BseMII	CTCAG	4 cut(s)	183, 1286, 1521, 2238
BseNI	ACTGG	3 cut(s)	210, 1492, 1662
BseRI	GAGGAG	6 cut(s)	236, 317, 449, 549, 1887, 2217
BseSI	GKGCMC	2 cut(s)	1526, 1726
BseXI	GCAGC	6 cut(s)	298, 388, 498, 504, 526, 1879
BsgI	GTGCAG	1 cut(s)	1023
BshFI	GGCC	8 cut(s)	72, 284, 458, 752, 1293, 1433, 1469, 1910
BshNI	GGYRCC	1 cut(s)	1621
BsiHKAI	GWGCWC	1 cut(s)	1650
BsiHKCI	CYCGRG	2 cut(s)	642, 2059
BsiSI	CCGG	6 cut(s)	119, 394, 1606, 1706, 1921, 2060
BslFI	GGGAC	3 cut(s)	1304, 1750, 2077
BslI	CCNNNNNNNGG	7 cut(s)	465, 569, 805, 881, 1300, 1327, 2060
BsmAI	GTCTC	4 cut(s)	687, 1028, 1189, 1270
BsmFI	GGGAC	3 cut(s)	1304, 1750, 2077
BsnI	GGCC	8 cut(s)	72, 284, 458, 752, 1293, 1433, 1469, 1910
Bso31I	GGTCTC	2 cut(s)	687, 1270
BsoBI	CYCGRG	2 cut(s)	642, 2059
Bsp1286I	GDGCHC	3 cut(s)	1526, 1650, 1726
Bsp13I	TCCGGA	1 cut(s)	118
Bsp143I	GATC	9 cut(s)	213, 607, 651, 703, 801, 871, 1227, 1498, 1588
BspACI	CCGC	6 cut(s)	576, 796, 915, 1540, 2169, 2187
BspANI	GGCC	8 cut(s)	72, 284, 458, 752, 1293, 1433, 1469, 1910
BspCNI	CTCAG	4 cut(s)	184, 1287, 1522, 2239
BspEI	TCCGGA	1 cut(s)	118
BspLI	GGNNCC	4 cut(s)	609, 1623, 1766, 2101
BspMAI	CTGCAG	1 cut(s)	516
BspMI	ACCTGC	1 cut(s)	2162
BspOI	GCTAGC	1 cut(s)	1560
BspPI	GGATC	6 cut(s)	602, 615, 698, 866, 1222, 1493
BspQI	GCTCTTC	1 cut(s)	420
BspT107I	GGYRCC	1 cut(s)	1621
BspTNI	GGTCTC	2 cut(s)	687, 1270
BsrBI	CCGCTC	1 cut(s)	1542
BsrDI	GCAATG	1 cut(s)	2213
BsrI	ACTGG	3 cut(s)	210, 1492, 1662
BssECI	CCNNGG	8 cut(s)	459, 1190, 1448, 1919, 2035, 2059, 2060, 2103
BssMI	GATC	9 cut(s)	213, 607, 651, 703, 801, 871, 1227, 1498, 1588
BssNI	GRCGYC	1 cut(s)	1575
BssSI	CACGAG	1 cut(s)	1776
BssT1I	CCWWGG	4 cut(s)	459, 1448, 2035, 2103
Bst2BI	CACGAG	1 cut(s)	1776
Bst2UI	CCWGG	3 cut(s)	386, 1191, 2084
Bst4CI	ACNGT	7 cut(s)	415, 589, 1044, 1121, 1516, 1621, 1639
Bst6I	CTCTTC	3 cut(s)	420, 1075, 1785
BstACI	GRCGYC	1 cut(s)	1575
BstAPI	GCANNNNNTGC	1 cut(s)	669
BstBAI	YACGTR	1 cut(s)	940
BstC8I	GCNNGC	5 cut(s)	297, 1056, 1558, 1702, 2217
BstDEI	CTNAG	4 cut(s)	192, 1295, 1530, 2247
BstENI	CCTNNNNNAGG	1 cut(s)	879
BstF5I	GGATG	7 cut(s)	111, 151, 665, 1289, 1336, 1735, 1915
BstHHI	GCGC	1 cut(s)	311
BstKTI	GATC	9 cut(s)	216, 610, 654, 706, 804, 874, 1230, 1501, 1591
BstMAI	GTCTC	4 cut(s)	687, 1028, 1189, 1270
BstMBI	GATC	9 cut(s)	213, 607, 651, 703, 801, 871, 1227, 1498, 1588
BstMWI	GCNNNNNNNGC	5 cut(s)	517, 669, 1046, 1055, 2212
BstNI	CCWGG	3 cut(s)	386, 1191, 2084
BstNSI	RCATGY	2 cut(s)	1355, 1730
BstSCI	CCNGG	9 cut(s)	384, 393, 1189, 1605, 1704, 1919, 2058, 2059, 2082
BstSFI	CTRYAG	5 cut(s)	512, 675, 1164, 1221, 1626
BstSLI	GKGCMC	2 cut(s)	1526, 1726
BstSNI	TACGTA	1 cut(s)	940
BstV1I	GCAGC	6 cut(s)	298, 388, 498, 504, 526, 1879
BstV2I	GAAGAC	4 cut(s)	349, 1122, 1498, 2133
BstX2I	RGATCY	3 cut(s)	607, 651, 1227
BstYI	RGATCY	3 cut(s)	607, 651, 1227
BsuRI	GGCC	8 cut(s)	72, 284, 458, 752, 1293, 1433, 1469, 1910
BtsCI	GGATG	7 cut(s)	111, 151, 665, 1289, 1336, 1735, 1915
BtsI	GCAGTG	1 cut(s)	2207
BtsIMutI	CAGTG	3 cut(s)	1040, 1521, 2207
BveI	ACCTGC	1 cut(s)	2162
Cac8I	GCNNGC	5 cut(s)	297, 1056, 1558, 1702, 2217
CaiI	CAGNNNCTG	2 cut(s)	419, 1037
CfoI	GCGC	1 cut(s)	311
Cfr13I	GGNCC	5 cut(s)	382, 750, 1291, 1400, 1764
Cfr9I	CCCGGG	1 cut(s)	2059
CseI	GACGC	1 cut(s)	1564
Csp6I	GTAC	3 cut(s)	590, 1109, 2153
CspCI	CAANNNNNGTGG	4 cut(s)	1459, 1494, 1742, 1777
CviQI	GTAC	3 cut(s)	590, 1109, 2153
DdeI	CTNAG	4 cut(s)	192, 1295, 1530, 2247
DpnI	GATC	9 cut(s)	215, 609, 653, 705, 803, 873, 1229, 1500, 1590
DpnII	GATC	9 cut(s)	213, 607, 651, 703, 801, 871, 1227, 1498, 1588
DraIII	CACNNNGTG	1 cut(s)	1609
DrdI	GACNNNNNNGTC	1 cut(s)	1042
DseDI	GACNNNNNNGTC	1 cut(s)	1042
EaeI	YGGCCR	4 cut(s)	282, 456, 1467, 1908
Eam1104I	CTCTTC	3 cut(s)	420, 1075, 1785
EarI	CTCTTC	3 cut(s)	420, 1075, 1785
Ecl136II	GAGCTC	1 cut(s)	1648
Eco105I	TACGTA	1 cut(s)	940
Eco130I	CCWWGG	4 cut(s)	459, 1448, 2035, 2103
Eco147I	AGGCCT	1 cut(s)	1433
Eco24I	GRGCYC	1 cut(s)	1650
Eco31I	GGTCTC	2 cut(s)	687, 1270
Eco47I	GGWCC	3 cut(s)	382, 1400, 1764
Eco53kI	GAGCTC	1 cut(s)	1648
Eco57I	CTGAAG	3 cut(s)	339, 603, 1716
Eco88I	CYCGRG	2 cut(s)	642, 2059
EcoICRI	GAGCTC	1 cut(s)	1648
EcoNI	CCTNNNNNAGG	1 cut(s)	879
EcoO109I	RGGNCCY	1 cut(s)	382
EcoRII	CCWGG	3 cut(s)	384, 1189, 2082
EcoT14I	CCWWGG	4 cut(s)	459, 1448, 2035, 2103
EcoT22I	ATGCAT	1 cut(s)	1289
EcoT38I	GRGCYC	1 cut(s)	1650
ErhI	CCWWGG	4 cut(s)	459, 1448, 2035, 2103
FaqI	GGGAC	3 cut(s)	1304, 1750, 2077
FauI	CCCGC	2 cut(s)	803, 908
FblI	GTMKAC	2 cut(s)	1305, 1578
Fnu4HI	GCNGC	8 cut(s)	312, 402, 512, 515, 518, 577, 1893, 2169
FokI	GGATG	7 cut(s)	98, 158, 672, 1296, 1343, 1722, 1902
FriOI	GRGCYC	1 cut(s)	1650
Fsp4HI	GCNGC	8 cut(s)	312, 402, 512, 515, 518, 577, 1893, 2169
FspBI	CTAG	2 cut(s)	1557, 2012
GlaI	GCGC	1 cut(s)	310
GluI	GCNGC	8 cut(s)	312, 402, 512, 515, 518, 577, 1893, 2169
GsuI	CTGGAG	2 cut(s)	74, 452
HaeIII	GGCC	8 cut(s)	72, 284, 458, 752, 1293, 1433, 1469, 1910
HapII	CCGG	6 cut(s)	119, 394, 1606, 1706, 1921, 2060
HgaI	GACGC	1 cut(s)	1564
HhaI	GCGC	1 cut(s)	311
Hin1I	GRCGYC	1 cut(s)	1575
Hin6I	GCGC	1 cut(s)	309
HinP1I	GCGC	1 cut(s)	309
HincII	GTYRAC	2 cut(s)	52, 1579
HindII	GTYRAC	2 cut(s)	52, 1579
HindIII	AAGCTT	1 cut(s)	713
HinfI	GANTC	7 cut(s)	7, 35, 791, 1368, 1774, 2087, 2190
HpaII	CCGG	6 cut(s)	119, 394, 1606, 1706, 1921, 2060
HphI	GGTGA	6 cut(s)	16, 17, 97, 1655, 2122, 2186
Hpy166II	GTNNAC	7 cut(s)	25, 52, 1089, 1157, 1306, 1579, 1612
Hpy188III	TCNNGA	9 cut(s)	119, 642, 869, 1014, 1529, 1651, 1771, 1778, 2194
Hpy8I	GTNNAC	7 cut(s)	25, 52, 1089, 1157, 1306, 1579, 1612
Hpy99I	CGWCG	2 cut(s)	1020, 1580
HpyAV	CCTTC	7 cut(s)	627, 875, 1123, 1210, 1423, 1513, 1661
HpyCH4III	ACNGT	7 cut(s)	415, 589, 1044, 1121, 1516, 1621, 1639
HpyCH4IV	ACGT	2 cut(s)	939, 1018
HpyF10VI	GCNNNNNNNGC	5 cut(s)	517, 669, 1046, 1055, 2212
HpyF3I	CTNAG	4 cut(s)	192, 1295, 1530, 2247
HpySE526I	ACGT	2 cut(s)	939, 1018
Hsp92I	GRCGYC	1 cut(s)	1575
HspAI	GCGC	1 cut(s)	309
Kpn2I	TCCGGA	1 cut(s)	118
Kzo9I	GATC	9 cut(s)	213, 607, 651, 703, 801, 871, 1227, 1498, 1588
LguI	GCTCTTC	1 cut(s)	420
LmnI	GCTCC	7 cut(s)	12, 204, 223, 562, 635, 1813, 2105
Lsp1109I	GCAGC	6 cut(s)	298, 388, 498, 504, 526, 1879
LweI	GCATC	7 cut(s)	650, 874, 1274, 1344, 1999, 2137, 2187
MaeI	CTAG	2 cut(s)	1557, 2012
MaeII	ACGT	2 cut(s)	939, 1018
MaeIII	GTNAC	4 cut(s)	4, 973, 1019, 1063
MalI	GATC	9 cut(s)	215, 609, 653, 705, 803, 873, 1229, 1500, 1590
MbiI	CCGCTC	1 cut(s)	1542
MboI	GATC	9 cut(s)	213, 607, 651, 703, 801, 871, 1227, 1498, 1588
MfeI	CAATTG	1 cut(s)	754
MflI	RGATCY	3 cut(s)	607, 651, 1227
MhlI	GDGCHC	3 cut(s)	1526, 1650, 1726
MlsI	TGGCCA	4 cut(s)	284, 458, 1469, 1910
MluNI	TGGCCA	4 cut(s)	284, 458, 1469, 1910
MlyI	GAGTC	2 cut(s)	29, 1768
MmeI	TCCRAC	2 cut(s)	198, 226
Mox20I	TGGCCA	4 cut(s)	284, 458, 1469, 1910
Mph1103I	ATGCAT	1 cut(s)	1289
MroI	TCCGGA	1 cut(s)	118
MroXI	GAANNNNTTC	2 cut(s)	1419, 1458
MscI	TGGCCA	4 cut(s)	284, 458, 1469, 1910
MseI	TTAA	6 cut(s)	134, 473, 932, 1239, 2076, 2160
MslI	CAYNNNNRTG	4 cut(s)	30, 1410, 1619, 2020
Msp20I	TGGCCA	4 cut(s)	284, 458, 1469, 1910
MspA1I	CMGCKG	3 cut(s)	517, 1049, 1388
MspI	CCGG	6 cut(s)	119, 394, 1606, 1706, 1921, 2060
MspR9I	CCNGG	9 cut(s)	386, 395, 1191, 1607, 1706, 1921, 2060, 2061, 2084
MunI	CAATTG	1 cut(s)	754
MvaI	CCWGG	3 cut(s)	386, 1191, 2084
MwoI	GCNNNNNNNGC	5 cut(s)	517, 669, 1046, 1055, 2212
NciI	CCSGG	6 cut(s)	395, 1607, 1706, 1921, 2060, 2061
NdeII	GATC	9 cut(s)	213, 607, 651, 703, 801, 871, 1227, 1498, 1588
NheI	GCTAGC	1 cut(s)	1556
NlaIV	GGNNCC	4 cut(s)	609, 1623, 1766, 2101
NmeAIII	GCCGAG	1 cut(s)	800
NmuCI	GTSAC	1 cut(s)	4
NsiI	ATGCAT	1 cut(s)	1289
NspI	RCATGY	2 cut(s)	1355, 1730
OliI	CACNNNNGTG	1 cut(s)	1619
PaeR7I	CTCGAG	1 cut(s)	642
PaqCI	CACCTGC	1 cut(s)	2162
PceI	AGGCCT	1 cut(s)	1433
PciSI	GCTCTTC	1 cut(s)	420
PcsI	WCGNNNNNNNCGW	1 cut(s)	72
PdmI	GAANNNNTTC	2 cut(s)	1419, 1458
PfeI	GAWTC	4 cut(s)	791, 1368, 2087, 2190
PkrI	GCNGC	8 cut(s)	313, 403, 513, 516, 519, 578, 1894, 2170
PleI	GAGTC	2 cut(s)	29, 1768
PpsI	GAGTC	2 cut(s)	29, 1768
Ppu21I	YACGTR	1 cut(s)	940
PpuMI	RGGWCCY	1 cut(s)	382
Psp124BI	GAGCTC	1 cut(s)	1650
Psp5II	RGGWCCY	1 cut(s)	382
Psp6I	CCWGG	3 cut(s)	384, 1189, 2082
PspGI	CCWGG	3 cut(s)	384, 1189, 2082
PspN4I	GGNNCC	4 cut(s)	609, 1623, 1766, 2101
PspPI	GGNCC	5 cut(s)	382, 750, 1291, 1400, 1764
PspPPI	RGGWCCY	1 cut(s)	382
PstI	CTGCAG	1 cut(s)	516
PstNI	CAGNNNCTG	2 cut(s)	419, 1037
PsuI	RGATCY	3 cut(s)	607, 651, 1227
PvuII	CAGCTG	3 cut(s)	517, 1049, 1388
RsaI	GTAC	3 cut(s)	591, 1110, 2154
RsaNI	GTAC	3 cut(s)	590, 1109, 2153
RseI	CAYNNNNRTG	4 cut(s)	30, 1410, 1619, 2020
SacI	GAGCTC	1 cut(s)	1650
SalI	GTCGAC	1 cut(s)	1577
SapI	GCTCTTC	1 cut(s)	420
SaqAI	TTAA	6 cut(s)	134, 473, 932, 1239, 2076, 2160
SatI	GCNGC	8 cut(s)	312, 402, 512, 515, 518, 577, 1893, 2169
Sau3AI	GATC	9 cut(s)	213, 607, 651, 703, 801, 871, 1227, 1498, 1588
Sau96I	GGNCC	5 cut(s)	382, 750, 1291, 1400, 1764
SchI	GAGTC	2 cut(s)	29, 1768
ScrFI	CCNGG	9 cut(s)	386, 395, 1191, 1607, 1706, 1921, 2060, 2061, 2084
SduI	GDGCHC	3 cut(s)	1526, 1650, 1726
SfaNI	GCATC	7 cut(s)	650, 874, 1274, 1344, 1999, 2137, 2187
SfcI	CTRYAG	5 cut(s)	512, 675, 1164, 1221, 1626
Sfr274I	CTCGAG	1 cut(s)	642
SinI	GGWCC	3 cut(s)	382, 1400, 1764
SlaI	CTCGAG	1 cut(s)	642
SmaI	CCCGGG	1 cut(s)	2061
SmiMI	CAYNNNNRTG	4 cut(s)	30, 1410, 1619, 2020
SmlI	CTYRAG	3 cut(s)	642, 1649, 2117
SmoI	CTYRAG	3 cut(s)	642, 1649, 2117
SnaBI	TACGTA	1 cut(s)	940
SseBI	AGGCCT	1 cut(s)	1433
SsiI	CCGC	6 cut(s)	576, 796, 915, 1540, 2169, 2187
SspI	AATATT	2 cut(s)	1957, 2095
SspMI	CTAG	2 cut(s)	1557, 2012
SstI	GAGCTC	1 cut(s)	1650
StuI	AGGCCT	1 cut(s)	1433
StyD4I	CCNGG	9 cut(s)	384, 393, 1189, 1605, 1704, 1919, 2058, 2059, 2082
StyI	CCWWGG	4 cut(s)	459, 1448, 2035, 2103
TaaI	ACNGT	7 cut(s)	415, 589, 1044, 1121, 1516, 1621, 1639
TaiI	ACGT	2 cut(s)	942, 1021
TaqI	TCGA	9 cut(s)	75, 212, 628, 643, 870, 1015, 1146, 1578, 1966
TatI	WGTACW	1 cut(s)	1108
TauI	GCSGC	2 cut(s)	579, 2171
TfiI	GAWTC	4 cut(s)	791, 1368, 2087, 2190
Tru1I	TTAA	6 cut(s)	134, 473, 932, 1239, 2076, 2160
Tru9I	TTAA	6 cut(s)	134, 473, 932, 1239, 2076, 2160
TscAI	CASTG	3 cut(s)	1047, 1521, 2207
TseFI	GTSAC	1 cut(s)	4
TseI	GCWGC	6 cut(s)	311, 401, 511, 514, 517, 1892
Tsp45I	GTSAC	1 cut(s)	4
TspDTI	ATGAA	8 cut(s)	162, 270, 504, 584, 804, 924, 1428, 1724
TspGWI	ACGGA	1 cut(s)	77
TspMI	CCCGGG	1 cut(s)	2059
TspRI	CASTG	3 cut(s)	1047, 1521, 2207
VpaK11BI	GGWCC	3 cut(s)	382, 1400, 1764
XagI	CCTNNNNNAGG	1 cut(s)	879
XapI	RAATTY	3 cut(s)	469, 624, 2139
XceI	RCATGY	2 cut(s)	1355, 1730
XhoI	CTCGAG	1 cut(s)	642
XmaI	CCCGGG	1 cut(s)	2059
XmiI	GTMKAC	2 cut(s)	1305, 1578
XmnI	GAANNNNTTC	2 cut(s)	1419, 1458
XspI	CTAG	2 cut(s)	1557, 2012
Zsp2I	ATGCAT	1 cut(s)	1289

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.