Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

N/A

Physical Location & Seq

Genomic Coordinates Forward (+)

237546 .. 242298

Gene Structure 4753 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G001800.1_v2.0.a1.CDS.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 615 bp

ATGGGAGGAGAAGAAAAGCCCAGGGGGGCGTGCTGGGTTTGGGGGTTGAAAAAAATAGAAGTGAGAGGTGGGGCATTTGTCTGGGAGTGGAGGGTGGTGGTCATGGGGAATGGGAGAAGAAGAAAGACCCGGGGGCAGGCTGGGCTTGGGGGTGAAAAACACGAAAGGGGGTCTGTGGGGTGGGAGTGGGGGATGGTGGTCATGGGGGCATGGGGTTATGGGAGGAGAAGAAAAATGTATGGGGTTCTAGGTTTGTGCAATGACGACTACGTGGCCATGATATGTGATCATCGATCCAAGATCAAGAGATCAATATGCAATGGAATTCTCAAGTTGCTTGACTCGCAGCTTATCAACCTGAATTTTCTATTTTCGTCAAAGGATGAGGATTCACAGTTGAAGGCTATAGACTTTGGCTTGTTAGATTTTGTCAAACTAGGTTGGTCATCAAAGTTACAAGTTGAAGTAAGATGGGCGGTGGAAGAGACAACAAAGATGAGTCTAATGACAAAGGGCTATTTTCACAATTTGCTAGATATGCTGCTAGACACTACCCACATGTGCCATTTTAATTGTGTATATGAGTTGGTAATTATAATTGATTGGCCCAGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004683 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009931 GO:0009987 GO:0010033 GO:0010857 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018105 GO:0018193 GO:0018209 GO:0019538 GO:0023052 GO:0032870 GO:0033993 GO:0035556 GO:0036211 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0046777 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071704 GO:0071944 GO:0097305 GO:0097306 GO:0140096 GO:1901564 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

205

Amino Acids

23.47

Weight (kDa)

9.15

Isoelectric Point (pI)

38.87

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	596
AciI	CCGC	1 cut(s)	476
AclWI	GGATC	1 cut(s)	288
AcoI	YGGCCR	1 cut(s)	273
AcsI	RAATTY	2 cut(s)	324, 361
AfiI	CCNNNNNNNGG	1 cut(s)	136
AflIII	ACRYGT	1 cut(s)	558
AgsI	TTSAA	3 cut(s)	49, 400, 464
AjnI	CCWGG	2 cut(s)	20, 608
AluBI	AGCT	1 cut(s)	349
AluI	AGCT	1 cut(s)	349
Alw26I	GTCTC	1 cut(s)	479
AlwI	GGATC	1 cut(s)	288
Ama87I	CYCGRG	1 cut(s)	129
AoxI	GGCC	2 cut(s)	273, 605
ApeKI	GCWGC	2 cut(s)	346, 541
ApoI	RAATTY	2 cut(s)	324, 361
AspS9I	GGNCC	1 cut(s)	606
AsuC2I	CCSGG	2 cut(s)	130, 131
AsuHPI	GGTGA	1 cut(s)	164
AvaI	CYCGRG	1 cut(s)	129
BalI	TGGCCA	1 cut(s)	275
BbvI	GCAGC	2 cut(s)	358, 528
BccI	CCATC	2 cut(s)	187, 465
BciT130I	CCWGG	2 cut(s)	22, 610
BclI	TGATCA	1 cut(s)	286
BcnI	CCSGG	2 cut(s)	130, 131
BcoDI	GTCTC	1 cut(s)	479
BfaI	CTAG	4 cut(s)	248, 437, 533, 545
BfmI	CTRYAG	1 cut(s)	405
BisI	GCNGC	2 cut(s)	347, 542
BlsI	GCNGC	2 cut(s)	348, 543
Bme1390I	CCNGG	4 cut(s)	22, 130, 131, 610
BmeT110I	CYCGRG	1 cut(s)	129
BmgT120I	GGNCC	1 cut(s)	606
BmrFI	CCNGG	4 cut(s)	22, 130, 131, 610
BpuEI	CTTGAG	1 cut(s)	314
BpuMI	CCSGG	2 cut(s)	130, 131
Bsa29I	ATCGAT	1 cut(s)	292
BsaAI	YACGTR	1 cut(s)	271
BsaJI	CCNNGG	5 cut(s)	20, 21, 129, 130, 608
Bsc4I	CCNNNNNNNGG	1 cut(s)	136
Bse3DI	GCAATG	2 cut(s)	265, 325
BseBI	CCWGG	2 cut(s)	22, 610
BseCI	ATCGAT	1 cut(s)	292
BseDI	CCNNGG	5 cut(s)	20, 21, 129, 130, 608
BseGI	GGATG	2 cut(s)	198, 388
BseLI	CCNNNNNNNGG	1 cut(s)	136
BseMI	GCAATG	2 cut(s)	265, 325
BseRI	GAGGAG	2 cut(s)	21, 238
BseXI	GCAGC	2 cut(s)	358, 528
BseYI	CCCAGC	2 cut(s)	33, 140
BshFI	GGCC	2 cut(s)	275, 607
BshVI	ATCGAT	1 cut(s)	292
BsiHKCI	CYCGRG	1 cut(s)	129
BsiSI	CCGG	1 cut(s)	130
BslI	CCNNNNNNNGG	1 cut(s)	136
BsmAI	GTCTC	1 cut(s)	479
BsnI	GGCC	2 cut(s)	275, 607
BsoBI	CYCGRG	1 cut(s)	129
Bsp143I	GATC	4 cut(s)	286, 293, 300, 308
BspACI	CCGC	1 cut(s)	476
BspANI	GGCC	2 cut(s)	275, 607
BspDI	ATCGAT	1 cut(s)	292
BspPI	GGATC	1 cut(s)	288
BsrDI	GCAATG	2 cut(s)	265, 325
BssECI	CCNNGG	5 cut(s)	20, 21, 129, 130, 608
BssMI	GATC	4 cut(s)	286, 293, 300, 308
Bst2UI	CCWGG	2 cut(s)	22, 610
Bst4CI	ACNGT	1 cut(s)	396
Bst6I	CTCTTC	1 cut(s)	477
BstBAI	YACGTR	1 cut(s)	271
BstC8I	GCNNGC	2 cut(s)	31, 138
BstF5I	GGATG	2 cut(s)	198, 388
BstKTI	GATC	4 cut(s)	289, 296, 303, 311
BstMAI	GTCTC	1 cut(s)	479
BstMBI	GATC	4 cut(s)	286, 293, 300, 308
BstMWI	GCNNNNNNNGC	3 cut(s)	142, 343, 538
BstNI	CCWGG	2 cut(s)	22, 610
BstNSI	RCATGY	1 cut(s)	562
BstSCI	CCNGG	4 cut(s)	20, 128, 129, 608
BstSFI	CTRYAG	1 cut(s)	405
BstV1I	GCAGC	2 cut(s)	358, 528
Bsu15I	ATCGAT	1 cut(s)	292
BsuRI	GGCC	2 cut(s)	275, 607
BsuTUI	ATCGAT	1 cut(s)	292
BtsCI	GGATG	2 cut(s)	198, 388
Cac8I	GCNNGC	2 cut(s)	31, 138
Cfr13I	GGNCC	1 cut(s)	606
Cfr9I	CCCGGG	1 cut(s)	129
ClaI	ATCGAT	1 cut(s)	292
CviAII	CATG	5 cut(s)	103, 202, 210, 277, 559
CviJI	RGCY	9 cut(s)	19, 140, 145, 275, 349, 404, 417, 516, 607
CviKI_1	RGCY	9 cut(s)	19, 140, 145, 275, 349, 404, 417, 516, 607
DpnI	GATC	4 cut(s)	288, 295, 302, 310
DpnII	GATC	4 cut(s)	286, 293, 300, 308
EaeI	YGGCCR	1 cut(s)	273
Eam1104I	CTCTTC	1 cut(s)	477
EarI	CTCTTC	1 cut(s)	477
Eco88I	CYCGRG	1 cut(s)	129
EcoRI	GAATTC	1 cut(s)	324
EcoRII	CCWGG	2 cut(s)	20, 608
FaeI	CATG	5 cut(s)	106, 205, 213, 280, 562
FatI	CATG	5 cut(s)	102, 201, 209, 276, 558
FbaI	TGATCA	1 cut(s)	286
Fnu4HI	GCNGC	2 cut(s)	347, 542
FokI	GGATG	2 cut(s)	205, 395
Fsp4HI	GCNGC	2 cut(s)	347, 542
FspBI	CTAG	4 cut(s)	248, 437, 533, 545
GluI	GCNGC	2 cut(s)	347, 542
GsaI	CCCAGC	2 cut(s)	37, 144
HaeIII	GGCC	2 cut(s)	275, 607
HapII	CCGG	1 cut(s)	130
Hin1II	CATG	5 cut(s)	106, 205, 213, 280, 562
HinfI	GANTC	3 cut(s)	341, 389, 499
HpaII	CCGG	1 cut(s)	130
HphI	GGTGA	1 cut(s)	164
Hpy188III	TCNNGA	1 cut(s)	304
HpyAV	CCTTC	1 cut(s)	394
HpyCH4III	ACNGT	1 cut(s)	396
HpyCH4IV	ACGT	1 cut(s)	270
HpyCH4V	TGCA	2 cut(s)	258, 318
HpyF10VI	GCNNNNNNNGC	3 cut(s)	142, 343, 538
HpySE526I	ACGT	1 cut(s)	270
Hsp92II	CATG	5 cut(s)	106, 205, 213, 280, 562
Ksp22I	TGATCA	1 cut(s)	286
Kzo9I	GATC	4 cut(s)	286, 293, 300, 308
LpnPI	CCDG	9 cut(s)	7, 19, 34, 67, 122, 126, 143, 371, 595
Lsp1109I	GCAGC	2 cut(s)	358, 528
MaeI	CTAG	4 cut(s)	248, 437, 533, 545
MaeII	ACGT	1 cut(s)	270
MaeIII	GTNAC	1 cut(s)	453
MalI	GATC	4 cut(s)	288, 295, 302, 310
MboI	GATC	4 cut(s)	286, 293, 300, 308
MboII	GAAGA	5 cut(s)	23, 129, 132, 240, 494
MlsI	TGGCCA	1 cut(s)	275
MluCI	AATT	6 cut(s)	324, 361, 526, 571, 591, 597
MluNI	TGGCCA	1 cut(s)	275
MlyI	GAGTC	2 cut(s)	335, 508
MnlI	CCTC	4 cut(s)	59, 84, 216, 379
Mox20I	TGGCCA	1 cut(s)	275
MscI	TGGCCA	1 cut(s)	275
MseI	TTAA	1 cut(s)	570
Msp20I	TGGCCA	1 cut(s)	275
MspI	CCGG	1 cut(s)	130
MspR9I	CCNGG	4 cut(s)	22, 130, 131, 610
MvaI	CCWGG	2 cut(s)	22, 610
MwoI	GCNNNNNNNGC	3 cut(s)	142, 343, 538
NciI	CCSGG	2 cut(s)	130, 131
NdeII	GATC	4 cut(s)	286, 293, 300, 308
NlaIII	CATG	5 cut(s)	106, 205, 213, 280, 562
NspI	RCATGY	1 cut(s)	562
PasI	CCCWGGG	1 cut(s)	21
PciI	ACATGT	1 cut(s)	558
PfeI	GAWTC	1 cut(s)	389
PkrI	GCNGC	2 cut(s)	348, 543
PleI	GAGTC	2 cut(s)	335, 507
PpsI	GAGTC	2 cut(s)	335, 507
Ppu21I	YACGTR	1 cut(s)	271
PscI	ACATGT	1 cut(s)	558
PsiI	TTATAA	1 cut(s)	596
Psp6I	CCWGG	2 cut(s)	20, 608
PspFI	CCCAGC	2 cut(s)	33, 140
PspGI	CCWGG	2 cut(s)	20, 608
PspPI	GGNCC	1 cut(s)	606
SaqAI	TTAA	1 cut(s)	570
SatI	GCNGC	2 cut(s)	347, 542
Sau3AI	GATC	4 cut(s)	286, 293, 300, 308
Sau96I	GGNCC	1 cut(s)	606
SchI	GAGTC	2 cut(s)	335, 508
ScrFI	CCNGG	4 cut(s)	22, 130, 131, 610
SetI	ASST	7 cut(s)	70, 253, 273, 351, 360, 442, 614
SfcI	CTRYAG	1 cut(s)	405
SmaI	CCCGGG	1 cut(s)	131
SmlI	CTYRAG	1 cut(s)	329
SmoI	CTYRAG	1 cut(s)	329
Sse9I	AATT	6 cut(s)	324, 361, 526, 571, 591, 597
SsiI	CCGC	1 cut(s)	476
SspMI	CTAG	4 cut(s)	248, 437, 533, 545
StyD4I	CCNGG	4 cut(s)	20, 128, 129, 608
TaaI	ACNGT	1 cut(s)	396
TaiI	ACGT	1 cut(s)	273
TaqI	TCGA	1 cut(s)	292
TasI	AATT	6 cut(s)	324, 361, 526, 571, 591, 597
TfiI	GAWTC	1 cut(s)	389
Tru1I	TTAA	1 cut(s)	570
Tru9I	TTAA	1 cut(s)	570
TseI	GCWGC	2 cut(s)	346, 541
TspMI	CCCGGG	1 cut(s)	129
XapI	RAATTY	2 cut(s)	324, 361
XceI	RCATGY	1 cut(s)	562
XmaI	CCCGGG	1 cut(s)	129
XspI	CTAG	4 cut(s)	248, 437, 533, 545

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.