Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

N/A

Physical Location & Seq

Genomic Coordinates Forward (+)

1984273 .. 1986210

Gene Structure 1938 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G014000.1_v2.0.a1.CDS.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 369 bp

ATGAGTCAAACGACGTCGTCGGTTGGGAGCTCGAAGATACTAAGGCTGTTTGGGGTGATCTTGGAGTGCCAGCAGCAGGCTGACCACGAGTCCCAGCCATCCATCCACTCCCGATGGCTCGTCGTCTTTGTCCATGTCATCGAGCCAGGGTCCAACCCCACACCTGACTCGGGTTGCAGCGCGTACACGAGATTTGTGAATTTGGACCGGTGGCTCGCCCTCCAGCTCCTCCCCACTGTCAAGATTGGTTTGCTTCAGCTTCTGGAGGAGATTCTCCTCCATTATTTTGCATACCCATCTTTTCTTGTGAGTGGAGACTGCAACAAGCTTTACCAATTTGTTAAGGAACAAACAGAGATGCTGACTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004497 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006629 GO:0006631 GO:0006950 GO:0008150 GO:0008152 GO:0008202 GO:0009507 GO:0009526 GO:0009536 GO:0009611 GO:0009941 GO:0009987 GO:0016125 GO:0016491 GO:0019752 GO:0031967 GO:0031975 GO:0032787 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044255 GO:0044281 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0050896 GO:0055114 GO:0071704 GO:1901360 GO:1901615

KEGG Pathways

Metabolic & Signaling

ko00592 ko01110 map00592 map01110

Pfam Domains

Protein Families

p450

Protein Analysis

123

Amino Acids

13.8

Weight (kDa)

5.71

Isoelectric Point (pI)

73.51

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	17
AccII	CGCG	1 cut(s)	182
AcsI	RAATTY	1 cut(s)	199
AcuI	CTGAAG	1 cut(s)	239
AcyI	GRCGYC	1 cut(s)	14
AfaI	GTAC	1 cut(s)	185
AfiI	CCNNNNNNNGG	2 cut(s)	76, 170
AgeI	ACCGGT	1 cut(s)	207
AhdI	GACNNNNNGTC	1 cut(s)	88
AjnI	CCWGG	1 cut(s)	145
AluBI	AGCT	4 cut(s)	30, 226, 259, 328
AluI	AGCT	4 cut(s)	30, 226, 259, 328
Alw21I	GWGCWC	1 cut(s)	32
Alw26I	GTCTC	1 cut(s)	309
AlwNI	CAGNNNCTG	1 cut(s)	262
Ama87I	CYCGRG	1 cut(s)	169
ApeKI	GCWGC	2 cut(s)	73, 177
ApoI	RAATTY	1 cut(s)	199
AsiGI	ACCGGT	1 cut(s)	207
AspLEI	GCGC	1 cut(s)	182
AspS9I	GGNCC	2 cut(s)	150, 205
AsuHPI	GGTGA	1 cut(s)	67
AvaI	CYCGRG	1 cut(s)	169
AvaII	GGWCC	2 cut(s)	150, 205
BanII	GRGCYC	1 cut(s)	32
BauI	CACGAG	2 cut(s)	86, 187
Bbv12I	GWGCWC	1 cut(s)	32
BbvI	GCAGC	2 cut(s)	85, 189
BccI	CCATC	4 cut(s)	106, 108, 110, 304
BciT130I	CCWGG	1 cut(s)	147
BcoDI	GTCTC	1 cut(s)	309
BisI	GCNGC	2 cut(s)	74, 178
BlsI	GCNGC	2 cut(s)	75, 179
Bme1390I	CCNGG	1 cut(s)	147
Bme18I	GGWCC	2 cut(s)	150, 205
BmeRI	GACNNNNNGTC	1 cut(s)	88
BmeT110I	CYCGRG	1 cut(s)	169
BmgT120I	GGNCC	2 cut(s)	150, 205
BmiI	GGNNCC	1 cut(s)	151
BmrFI	CCNGG	1 cut(s)	147
BmsI	GCATC	1 cut(s)	348
BpmI	CTGGAG	2 cut(s)	206, 284
BsaHI	GRCGYC	1 cut(s)	14
BsaJI	CCNNGG	1 cut(s)	146
BsaWI	WCCGGW	1 cut(s)	207
Bsc4I	CCNNNNNNNGG	2 cut(s)	76, 170
Bse118I	RCCGGY	1 cut(s)	207
BseBI	CCWGG	1 cut(s)	147
BseDI	CCNNGG	1 cut(s)	146
BseGI	GGATG	2 cut(s)	98, 102
BseLI	CCNNNNNNNGG	2 cut(s)	76, 170
BseRI	GAGGAG	3 cut(s)	218, 266, 281
BseXI	GCAGC	2 cut(s)	85, 189
BseYI	CCCAGC	1 cut(s)	93
Bsh1236I	CGCG	1 cut(s)	182
BshTI	ACCGGT	1 cut(s)	207
BsiHKAI	GWGCWC	1 cut(s)	32
BsiHKCI	CYCGRG	1 cut(s)	169
BsiSI	CCGG	1 cut(s)	208
BslFI	GGGAC	1 cut(s)	76
BslI	CCNNNNNNNGG	2 cut(s)	76, 170
BsmAI	GTCTC	1 cut(s)	309
BsmFI	GGGAC	1 cut(s)	76
BsoBI	CYCGRG	1 cut(s)	169
Bsp1286I	GDGCHC	1 cut(s)	32
Bsp143I	GATC	1 cut(s)	57
BspFNI	CGCG	1 cut(s)	182
BspLI	GGNNCC	1 cut(s)	151
BsrFI	RCCGGY	1 cut(s)	207
BssAI	RCCGGY	1 cut(s)	207
BssECI	CCNNGG	1 cut(s)	146
BssMI	GATC	1 cut(s)	57
BssNI	GRCGYC	1 cut(s)	14
BssSI	CACGAG	2 cut(s)	86, 187
Bst2BI	CACGAG	2 cut(s)	86, 187
Bst2UI	CCWGG	1 cut(s)	147
Bst4CI	ACNGT	1 cut(s)	238
BstACI	GRCGYC	1 cut(s)	14
BstC8I	GCNNGC	3 cut(s)	71, 78, 216
BstDEI	CTNAG	1 cut(s)	41
BstF5I	GGATG	2 cut(s)	98, 102
BstFNI	CGCG	1 cut(s)	182
BstHHI	GCGC	1 cut(s)	182
BstKTI	GATC	1 cut(s)	60
BstMAI	GTCTC	1 cut(s)	309
BstMBI	GATC	1 cut(s)	57
BstNI	CCWGG	1 cut(s)	147
BstSCI	CCNGG	1 cut(s)	145
BstUI	CGCG	1 cut(s)	182
BstV1I	GCAGC	2 cut(s)	85, 189
BtsCI	GGATG	2 cut(s)	98, 102
BtsIMutI	CAGTG	1 cut(s)	234
Cac8I	GCNNGC	3 cut(s)	71, 78, 216
CaiI	CAGNNNCTG	1 cut(s)	262
CfoI	GCGC	1 cut(s)	182
Cfr10I	RCCGGY	1 cut(s)	207
Cfr13I	GGNCC	2 cut(s)	150, 205
Csp6I	GTAC	1 cut(s)	184
CspAI	ACCGGT	1 cut(s)	207
CviAII	CATG	1 cut(s)	134
CviQI	GTAC	1 cut(s)	184
DdeI	CTNAG	1 cut(s)	41
DpnI	GATC	1 cut(s)	59
DpnII	GATC	1 cut(s)	57
DriI	GACNNNNNGTC	1 cut(s)	88
Eam1105I	GACNNNNNGTC	1 cut(s)	88
Ecl136II	GAGCTC	1 cut(s)	30
Eco24I	GRGCYC	1 cut(s)	32
Eco47I	GGWCC	2 cut(s)	150, 205
Eco53kI	GAGCTC	1 cut(s)	30
Eco57I	CTGAAG	1 cut(s)	239
Eco88I	CYCGRG	1 cut(s)	169
EcoICRI	GAGCTC	1 cut(s)	30
EcoRII	CCWGG	1 cut(s)	145
EcoT38I	GRGCYC	1 cut(s)	32
FaeI	CATG	1 cut(s)	137
FaiI	YATR	2 cut(s)	135, 292
FaqI	GGGAC	1 cut(s)	76
FatI	CATG	1 cut(s)	133
Fnu4HI	GCNGC	2 cut(s)	74, 178
FokI	GGATG	2 cut(s)	85, 89
FriOI	GRGCYC	1 cut(s)	32
Fsp4HI	GCNGC	2 cut(s)	74, 178
GlaI	GCGC	1 cut(s)	181
GluI	GCNGC	2 cut(s)	74, 178
GsaI	CCCAGC	1 cut(s)	97
GsuI	CTGGAG	2 cut(s)	206, 284
HapII	CCGG	1 cut(s)	208
HhaI	GCGC	1 cut(s)	182
Hin1I	GRCGYC	1 cut(s)	14
Hin1II	CATG	1 cut(s)	137
Hin6I	GCGC	1 cut(s)	180
HinP1I	GCGC	1 cut(s)	180
HindIII	AAGCTT	1 cut(s)	326
HinfI	GANTC	4 cut(s)	4, 89, 167, 271
HpaII	CCGG	1 cut(s)	208
HphI	GGTGA	1 cut(s)	67
Hpy166II	GTNNAC	1 cut(s)	186
Hpy188III	TCNNGA	3 cut(s)	111, 241, 263
Hpy8I	GTNNAC	1 cut(s)	186
Hpy99I	CGWCG	4 cut(s)	16, 19, 22, 125
HpyCH4III	ACNGT	1 cut(s)	238
HpyCH4IV	ACGT	1 cut(s)	14
HpyCH4V	TGCA	3 cut(s)	177, 290, 321
HpyF3I	CTNAG	1 cut(s)	41
HpySE526I	ACGT	1 cut(s)	14
Hsp92I	GRCGYC	1 cut(s)	14
Hsp92II	CATG	1 cut(s)	137
HspAI	GCGC	1 cut(s)	180
Kzo9I	GATC	1 cut(s)	57
LmnI	GCTCC	2 cut(s)	27, 231
LpnPI	CCDG	9 cut(s)	62, 83, 107, 132, 159, 177, 221, 236, 248
Lsp1109I	GCAGC	2 cut(s)	85, 189
LweI	GCATC	1 cut(s)	348
MaeII	ACGT	1 cut(s)	14
MalI	GATC	1 cut(s)	59
MboI	GATC	1 cut(s)	57
MboII	GAAGA	1 cut(s)	46
MhlI	GDGCHC	1 cut(s)	32
MluCI	AATT	2 cut(s)	199, 335
MlyI	GAGTC	3 cut(s)	13, 98, 161
MmeI	TCCRAC	1 cut(s)	177
MnlI	CCTC	4 cut(s)	230, 239, 259, 287
MseI	TTAA	2 cut(s)	342, 367
MspI	CCGG	1 cut(s)	208
MspR9I	CCNGG	1 cut(s)	147
MvaI	CCWGG	1 cut(s)	147
MvnI	CGCG	1 cut(s)	182
NdeII	GATC	1 cut(s)	57
NlaIII	CATG	1 cut(s)	137
NlaIV	GGNNCC	1 cut(s)	151
PfeI	GAWTC	1 cut(s)	271
PflFI	GACNNNGTC	1 cut(s)	16
PinAI	ACCGGT	1 cut(s)	207
PkrI	GCNGC	2 cut(s)	75, 179
PleI	GAGTC	3 cut(s)	12, 97, 161
PpsI	GAGTC	3 cut(s)	12, 97, 161
Psp124BI	GAGCTC	1 cut(s)	32
Psp6I	CCWGG	1 cut(s)	145
PspFI	CCCAGC	1 cut(s)	93
PspGI	CCWGG	1 cut(s)	145
PspN4I	GGNNCC	1 cut(s)	151
PspPI	GGNCC	2 cut(s)	150, 205
PstNI	CAGNNNCTG	1 cut(s)	262
PsyI	GACNNNGTC	1 cut(s)	16
RsaI	GTAC	1 cut(s)	185
RsaNI	GTAC	1 cut(s)	184
SacI	GAGCTC	1 cut(s)	32
SaqAI	TTAA	2 cut(s)	342, 367
SatI	GCNGC	2 cut(s)	74, 178
Sau3AI	GATC	1 cut(s)	57
Sau96I	GGNCC	2 cut(s)	150, 205
SchI	GAGTC	3 cut(s)	13, 98, 161
ScrFI	CCNGG	1 cut(s)	147
SduI	GDGCHC	1 cut(s)	32
SetI	ASST	6 cut(s)	17, 32, 166, 228, 261, 330
SfaNI	GCATC	1 cut(s)	348
SinI	GGWCC	2 cut(s)	150, 205
Sse9I	AATT	2 cut(s)	199, 335
SstI	GAGCTC	1 cut(s)	32
StyD4I	CCNGG	1 cut(s)	145
TaaI	ACNGT	1 cut(s)	238
TaiI	ACGT	1 cut(s)	17
TaqI	TCGA	2 cut(s)	32, 141
TasI	AATT	2 cut(s)	199, 335
TfiI	GAWTC	1 cut(s)	271
Tru1I	TTAA	2 cut(s)	342, 367
Tru9I	TTAA	2 cut(s)	342, 367
TscAI	CASTG	1 cut(s)	241
TseI	GCWGC	2 cut(s)	73, 177
TspRI	CASTG	1 cut(s)	241
Tth111I	GACNNNGTC	1 cut(s)	16
VpaK11BI	GGWCC	2 cut(s)	150, 205
XapI	RAATTY	1 cut(s)	199
ZraI	GACGTC	1 cut(s)	15

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.