Prupe.7G021800_v2.0.a1

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
N/A
Physical Location & Seq
Reverse (-)
3353892 .. 3354352
461 bp
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UTR
Exon/CDS
Intron
Prupe.7G021800.1_v2.0.a1.CDS.1

Sequence Viewer

Length: 276 bp
ATGAAGGACCGAAAAAATCTGCAGGTTATATATGAAGCTATGAGATGTGGGAATGTAGTCAAATTTCTGCACAGGAAATCTCTTTTGGTCATACCATCAGGATGGAAGGTTCTTCCAATCTTTTATGGGGTGCATTTGGATCAAGCTCTTCACGAAAACCCCACGAAGTTTGATCCTTGGAGATGGGCAGTATATTACAAAGAGATGAGCAAAAAAGTGACAGTGTTTGGTGGTGGAGTGAGGCTCTGTCCGGGAGCAGAACTGGCTAAAGTATAG

Protein Analysis

92

Amino Acids

10.5

Weight (kDa)

9.78

Isoelectric Point (pI)

27.72

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 13
AclWI GGATC 2 cut(s) 147, 167
AcsI RAATTY 1 cut(s) 62
AjuI GAANNNNNNNTTGG 2 cut(s) 68, 100
AloI GAACNNNNNNTCC 2 cut(s) 93, 125
AluBI AGCT 2 cut(s) 38, 146
AluI AGCT 2 cut(s) 38, 146
AlwI GGATC 2 cut(s) 147, 167
ApoI RAATTY 1 cut(s) 62
AspS9I GGNCC 1 cut(s) 7
AsuC2I CCSGG 1 cut(s) 252
AvaII GGWCC 1 cut(s) 7
BccI CCATC 3 cut(s) 96, 103, 177
BcnI CCSGG 1 cut(s) 252
BfmI CTRYAG 1 cut(s) 20
BfuAI ACCTGC 1 cut(s) 13
Bme1390I CCNGG 1 cut(s) 252
Bme18I GGWCC 1 cut(s) 7
BmgT120I GGNCC 1 cut(s) 7
BmrFI CCNGG 1 cut(s) 252
BplI GAGNNNNNCTC 2 cut(s) 228, 260
BpuMI CCSGG 1 cut(s) 252
BsaJI CCNNGG 1 cut(s) 176
Bse1I ACTGG 1 cut(s) 267
BseDI CCNNGG 1 cut(s) 176
BseGI GGATG 1 cut(s) 107
BseNI ACTGG 1 cut(s) 267
BsgI GTGCAG 1 cut(s) 53
BsiSI CCGG 1 cut(s) 251
Bsp143I GATC 2 cut(s) 139, 172
BspMAI CTGCAG 1 cut(s) 24
BspMI ACCTGC 1 cut(s) 13
BspPI GGATC 2 cut(s) 147, 167
BspQI GCTCTTC 1 cut(s) 153
BsrI ACTGG 1 cut(s) 267
BssECI CCNNGG 1 cut(s) 176
BssMI GATC 2 cut(s) 139, 172
BssT1I CCWWGG 1 cut(s) 176
Bst4CI ACNGT 1 cut(s) 223
Bst6I CTCTTC 1 cut(s) 153
BstF5I GGATG 1 cut(s) 107
BstKTI GATC 2 cut(s) 142, 175
BstMBI GATC 2 cut(s) 139, 172
BstMWI GCNNNNNNNGC 1 cut(s) 263
BstSCI CCNGG 1 cut(s) 250
BstSFI CTRYAG 1 cut(s) 20
BstXI CCANNNNNNTGG 1 cut(s) 102
BtsCI GGATG 1 cut(s) 107
BtsIMutI CAGTG 1 cut(s) 228
BveI ACCTGC 1 cut(s) 13
Cfr13I GGNCC 1 cut(s) 7
CspCI CAANNNNNGTGG 2 cut(s) 151, 186
CviJI RGCY 4 cut(s) 38, 146, 244, 266
CviKI_1 RGCY 4 cut(s) 38, 146, 244, 266
DpnI GATC 2 cut(s) 141, 174
DpnII GATC 2 cut(s) 139, 172
Eam1104I CTCTTC 1 cut(s) 153
EarI CTCTTC 1 cut(s) 153
Eco130I CCWWGG 1 cut(s) 176
Eco47I GGWCC 1 cut(s) 7
EcoT14I CCWWGG 1 cut(s) 176
ErhI CCWWGG 1 cut(s) 176
FaiI YATR 8 cut(s) 29, 31, 33, 41, 92, 126, 193, 274
FokI GGATG 1 cut(s) 114
HapII CCGG 1 cut(s) 251
HpaII CCGG 1 cut(s) 251
Hpy188III TCNNGA 2 cut(s) 99, 152
HpyAV CCTTC 1 cut(s) 100
HpyCH4III ACNGT 1 cut(s) 223
HpyCH4V TGCA 3 cut(s) 22, 70, 133
HpyF10VI GCNNNNNNNGC 1 cut(s) 263
Kzo9I GATC 2 cut(s) 139, 172
LguI GCTCTTC 1 cut(s) 153
LmnI GCTCC 1 cut(s) 254
LpnPI CCDG 5 cut(s) 8, 58, 84, 248, 264
MaeIII GTNAC 1 cut(s) 217
MalI GATC 2 cut(s) 141, 174
MboI GATC 2 cut(s) 139, 172
MboII GAAGA 2 cut(s) 104, 140
MluCI AATT 1 cut(s) 62
MnlI CCTC 1 cut(s) 234
MslI CAYNNNNRTG 1 cut(s) 100
MspI CCGG 1 cut(s) 251
MspR9I CCNGG 1 cut(s) 252
MwoI GCNNNNNNNGC 1 cut(s) 263
NciI CCSGG 1 cut(s) 252
NdeII GATC 2 cut(s) 139, 172
NmuCI GTSAC 1 cut(s) 217
PciSI GCTCTTC 1 cut(s) 153
PfoI TCCNGGA 1 cut(s) 250
PspPI GGNCC 1 cut(s) 7
PstI CTGCAG 1 cut(s) 24
RseI CAYNNNNRTG 1 cut(s) 100
SapI GCTCTTC 1 cut(s) 153
Sau3AI GATC 2 cut(s) 139, 172
Sau96I GGNCC 1 cut(s) 7
ScrFI CCNGG 1 cut(s) 252
SetI ASST 4 cut(s) 27, 40, 111, 148
SfcI CTRYAG 1 cut(s) 20
SgeI CNNG 9 cut(s) 35, 85, 111, 155, 164, 175, 189, 263, 264
SinI GGWCC 1 cut(s) 7
SmiMI CAYNNNNRTG 1 cut(s) 100
Sse9I AATT 1 cut(s) 62
StyD4I CCNGG 1 cut(s) 250
StyI CCWWGG 1 cut(s) 176
TaaI ACNGT 1 cut(s) 223
TaqII GACCGA 1 cut(s) 24
TasI AATT 1 cut(s) 62
TscAI CASTG 1 cut(s) 228
TseFI GTSAC 1 cut(s) 217
Tsp45I GTSAC 1 cut(s) 217
TspDTI ATGAA 2 cut(s) 17, 48
TspRI CASTG 1 cut(s) 228
VpaK11BI GGWCC 1 cut(s) 7
XapI RAATTY 1 cut(s) 62
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.