Prupe.7G024600_v2.0.a1

Magnesium-chelatase subunit ChlH

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
N/A
Physical Location & Seq
Reverse (-)
3879290 .. 3880149
860 bp
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UTR
Exon/CDS
Intron
Prupe.7G024600.1_v2.0.a1.CDS.2

Sequence Viewer

Length: 216 bp
ATGCTTTGTTCGCCATGGGCATCAAGCAATACGAAAACTTCTCTACGTTTGATTAAGGTTGAATATGGTGAGTATGACCTCGAGAACGCCAACATTTTCATTGGGTCTTCGATTTTTGTTGAGGAGCATGCTATCAAGGTGTGGGATGCTGTGGAGAAAGAAACGAATAGGCTTGATGCAGTTTTCTTTCTTTTTGCCCTAGTAGATTCAAAATAA

Protein Analysis

72

Amino Acids

8.1

Weight (kDa)

4.75

Isoelectric Point (pI)

24.96

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AgsI TTSAA 2 cut(s) 62, 210
Ama87I CYCGRG 1 cut(s) 80
AsuHPI GGTGA 1 cut(s) 80
AvaI CYCGRG 1 cut(s) 80
BbsI GAAGAC 1 cut(s) 99
BfaI CTAG 1 cut(s) 200
BmeT110I CYCGRG 1 cut(s) 80
BmsI GCATC 3 cut(s) 29, 136, 166
BpiI GAAGAC 1 cut(s) 99
BsaJI CCNNGG 1 cut(s) 14
BseDI CCNNGG 1 cut(s) 14
BseGI GGATG 1 cut(s) 151
BseRI GAGGAG 1 cut(s) 137
BsiHKCI CYCGRG 1 cut(s) 80
BsoBI CYCGRG 1 cut(s) 80
Bsp19I CCATGG 1 cut(s) 14
BssECI CCNNGG 1 cut(s) 14
BssT1I CCWWGG 1 cut(s) 14
BstC8I GCNNGC 1 cut(s) 129
BstDSI CCRYGG 1 cut(s) 14
BstF5I GGATG 1 cut(s) 151
BstMWI GCNNNNNNNGC 1 cut(s) 10
BstNSI RCATGY 1 cut(s) 131
BstV2I GAAGAC 1 cut(s) 99
BtgI CCRYGG 1 cut(s) 14
BtsCI GGATG 1 cut(s) 151
Cac8I GCNNGC 1 cut(s) 129
CviAII CATG 2 cut(s) 15, 128
CviJI RGCY 1 cut(s) 172
CviKI_1 RGCY 1 cut(s) 172
Eco130I CCWWGG 1 cut(s) 14
Eco88I CYCGRG 1 cut(s) 80
EcoT14I CCWWGG 1 cut(s) 14
ErhI CCWWGG 1 cut(s) 14
FaeI CATG 2 cut(s) 18, 131
FaiI YATR 4 cut(s) 16, 66, 75, 129
FatI CATG 2 cut(s) 14, 127
FokI GGATG 1 cut(s) 158
FspBI CTAG 1 cut(s) 200
Hin1II CATG 2 cut(s) 18, 131
HinfI GANTC 1 cut(s) 206
HphI GGTGA 1 cut(s) 80
Hpy188III TCNNGA 1 cut(s) 82
HpyCH4IV ACGT 1 cut(s) 46
HpyCH4V TGCA 1 cut(s) 179
HpyF10VI GCNNNNNNNGC 1 cut(s) 10
HpySE526I ACGT 1 cut(s) 46
Hsp92II CATG 2 cut(s) 18, 131
LmnI GCTCC 1 cut(s) 124
LweI GCATC 3 cut(s) 29, 136, 166
MaeI CTAG 1 cut(s) 200
MaeII ACGT 1 cut(s) 46
MboII GAAGA 1 cut(s) 99
MnlI CCTC 2 cut(s) 89, 115
MseI TTAA 1 cut(s) 54
MwoI GCNNNNNNNGC 1 cut(s) 10
NcoI CCATGG 1 cut(s) 14
NlaIII CATG 2 cut(s) 18, 131
NspI RCATGY 1 cut(s) 131
PaeI GCATGC 1 cut(s) 131
PaeR7I CTCGAG 1 cut(s) 80
PfeI GAWTC 1 cut(s) 206
SaqAI TTAA 1 cut(s) 54
SetI ASST 4 cut(s) 49, 60, 81, 141
SfaNI GCATC 3 cut(s) 29, 136, 166
Sfr274I CTCGAG 1 cut(s) 80
SgeI CNNG 8 cut(s) 27, 36, 92, 94, 140, 148, 185, 212
SlaI CTCGAG 1 cut(s) 80
SmlI CTYRAG 1 cut(s) 80
SmoI CTYRAG 1 cut(s) 80
SphI GCATGC 1 cut(s) 131
SspMI CTAG 1 cut(s) 200
StyI CCWWGG 1 cut(s) 14
TaiI ACGT 1 cut(s) 49
TaqI TCGA 2 cut(s) 81, 110
TfiI GAWTC 1 cut(s) 206
Tru1I TTAA 1 cut(s) 54
Tru9I TTAA 1 cut(s) 54
TspDTI ATGAA 1 cut(s) 88
XceI RCATGY 1 cut(s) 131
XhoI CTCGAG 1 cut(s) 80
XspI CTAG 1 cut(s) 200
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.