Prupe.7G044000_v2.0.a1

Threonine dehydratase biosynthetic

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
N/A
Physical Location & Seq
Forward (+)
8019215 .. 8019731
517 bp
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UTR
Exon/CDS
Intron
Prupe.7G044000.1_v2.0.a1.CDS.1

Sequence Viewer

Length: 234 bp
ATGGATGAACTGCTCCTTCTTCCAGAATTATTTACTATGCTGGAGAAAAGCCGTACTCGACGTACTGCCACCGATGGAAACGACAACGGGAAAATTGTCGACGCCATGCAGTACTTGATGAACATACTGTCGTCGGAGGTGTATGACGTGGCCATCGAATCGTCGTTAGAATTGGCCACAAAGGTGTCGGAGCGATTGGGAGTGAGAGTTTGGATGAAAAGAGAGGACTTGTAG

Protein Analysis

78

Amino Acids

8.85

Weight (kDa)

4.71

Isoelectric Point (pI)

51.52

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 99
AcoI YGGCCR 2 cut(s) 150, 174
AcyI GRCGYC 1 cut(s) 102
AfaI GTAC 3 cut(s) 55, 64, 113
AjiI CACGTC 1 cut(s) 148
AleI CACNNNNGTG 1 cut(s) 182
AoxI GGCC 2 cut(s) 150, 174
BalI TGGCCA 2 cut(s) 152, 176
BccI CCATC 2 cut(s) 68, 161
BceAI ACGGC 1 cut(s) 36
BmcAI AGTACT 1 cut(s) 113
BmgBI CACGTC 1 cut(s) 148
BpmI CTGGAG 1 cut(s) 62
BsaHI GRCGYC 1 cut(s) 102
BsaXI ACNNNNNCTCC 2 cut(s) 192, 222
BseGI GGATG 2 cut(s) 10, 219
BshFI GGCC 2 cut(s) 152, 176
BsnI GGCC 2 cut(s) 152, 176
BspANI GGCC 2 cut(s) 152, 176
BssNI GRCGYC 1 cut(s) 102
Bst4CI ACNGT 1 cut(s) 129
BstACI GRCGYC 1 cut(s) 102
BstF5I GGATG 2 cut(s) 10, 219
BsuRI GGCC 2 cut(s) 152, 176
BtrI CACGTC 1 cut(s) 148
BtsCI GGATG 2 cut(s) 10, 219
CseI GACGC 1 cut(s) 110
Csp6I GTAC 3 cut(s) 54, 63, 112
CviAII CATG 1 cut(s) 106
CviJI RGCY 3 cut(s) 51, 152, 176
CviKI_1 RGCY 3 cut(s) 51, 152, 176
CviQI GTAC 3 cut(s) 54, 63, 112
EaeI YGGCCR 2 cut(s) 150, 174
FaeI CATG 1 cut(s) 109
FaiI YATR 4 cut(s) 38, 107, 125, 144
FatI CATG 1 cut(s) 105
FblI GTMKAC 1 cut(s) 99
FokI GGATG 2 cut(s) 17, 226
GsuI CTGGAG 1 cut(s) 62
HaeIII GGCC 2 cut(s) 152, 176
HgaI GACGC 1 cut(s) 110
Hin1I GRCGYC 1 cut(s) 102
Hin1II CATG 1 cut(s) 109
HincII GTYRAC 1 cut(s) 100
HindII GTYRAC 1 cut(s) 100
HinfI GANTC 1 cut(s) 158
Hpy166II GTNNAC 1 cut(s) 100
Hpy188I TCNGA 2 cut(s) 136, 190
Hpy188III TCNNGA 1 cut(s) 23
Hpy8I GTNNAC 1 cut(s) 100
Hpy99I CGWCG 4 cut(s) 63, 104, 136, 166
HpyAV CCTTC 1 cut(s) 26
HpyCH4III ACNGT 1 cut(s) 129
HpyCH4IV ACGT 2 cut(s) 61, 147
HpyCH4V TGCA 1 cut(s) 109
HpySE526I ACGT 2 cut(s) 61, 147
Hsp92I GRCGYC 1 cut(s) 102
Hsp92II CATG 1 cut(s) 109
LmnI GCTCC 2 cut(s) 18, 190
LpnPI CCDG 2 cut(s) 26, 36
MaeII ACGT 2 cut(s) 61, 147
MboII GAAGA 1 cut(s) 11
MlsI TGGCCA 2 cut(s) 152, 176
MluCI AATT 3 cut(s) 26, 93, 170
MluNI TGGCCA 2 cut(s) 152, 176
MmeI TCCRAC 2 cut(s) 114, 168
MnlI CCTC 2 cut(s) 130, 217
Mox20I TGGCCA 2 cut(s) 152, 176
MscI TGGCCA 2 cut(s) 152, 176
MslI CAYNNNNRTG 1 cut(s) 182
Msp20I TGGCCA 2 cut(s) 152, 176
NlaIII CATG 1 cut(s) 109
OliI CACNNNNGTG 1 cut(s) 182
PcsI WCGNNNNNNNCGW 1 cut(s) 153
PfeI GAWTC 1 cut(s) 158
RsaI GTAC 3 cut(s) 55, 64, 113
RsaNI GTAC 3 cut(s) 54, 63, 112
RseI CAYNNNNRTG 1 cut(s) 182
SalI GTCGAC 1 cut(s) 98
ScaI AGTACT 1 cut(s) 113
SetI ASST 4 cut(s) 64, 141, 150, 186
SgeI CNNG 7 cut(s) 35, 53, 69, 100, 118, 127, 160
SmiMI CAYNNNNRTG 1 cut(s) 182
Sse9I AATT 3 cut(s) 26, 93, 170
TaaI ACNGT 1 cut(s) 129
TaiI ACGT 2 cut(s) 64, 150
TaqI TCGA 3 cut(s) 58, 99, 156
TasI AATT 3 cut(s) 26, 93, 170
TatI WGTACW 1 cut(s) 111
TfiI GAWTC 1 cut(s) 158
TspDTI ATGAA 3 cut(s) 21, 134, 230
XmiI GTMKAC 1 cut(s) 99
ZrmI AGTACT 1 cut(s) 113
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.