Prupe.7G048700_v2.0.a1

Protein of unknown function (DUF674)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
N/A
Physical Location & Seq
Reverse (-)
8558596 .. 8559796
1201 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G048700.1_v2.0.a1.CDS.2

Sequence Viewer

Length: 672 bp
ATGGCAACCTCCAACAGTGCACATGTGAGCTTGAAACTCCTGATCGACACAAATGGTCGCAAAGTTTTGTTTGCCGAAGCCAGCAAGGATGTTGTTGATTTTCTCTTCAGGCTCCTCTCCAAAGACGGCATAGTTGGTAGCATGGGAAAGCTTTATGAGAGTGTAGAAAATCTCAATGACACATACTTGCAACCCAATCTTGACAAGGACACCTTGCTGAAACCAAAGACCACAGTTGCTGGTGCCAATATCCTTCCTCAGCTGACCAACAATATTAATGTCGACTCGAATTCTAAACAGTTCTACATGTGTTCAAACTGCTATCCCCGCCATATTTCCGATGTTAGTGGAACCACTTGCCCAAATAGTTATTCCATATCCTCTAGGGTGACTTATGTTTCCCCACAAGCTTCTTCTTCTACGGTGGTGGCAACGTCCGGCAGCGAGGGAGGGTATGTCAAGGGAGTAGTAACATACATGGTCATGGATAACTTGGAGGTGAAGCCAATGTCCACCATTTCAAGTATTGCTGTACTTAACCAGTTCAATGTGAAGGATGTTGGTGCTCTTCAAGAGAAGGTGGTTCATCTTGGGATGCAAGAGGGTTTGAAGCTGCTGAAGGCATCGTTCGAGACCAGTGCAGTCCTTACCAAAGTGTTCCTGGGGGCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF674

Protein Analysis

224

Amino Acids

24.05

Weight (kDa)

7.67

Isoelectric Point (pI)

26.73

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 242
AccI GTMKAC 1 cut(s) 282
AciI CCGC 1 cut(s) 328
AcsI RAATTY 1 cut(s) 289
AcuI CTGAAG 2 cut(s) 91, 638
AfaI GTAC 1 cut(s) 534
AflIII ACRYGT 2 cut(s) 22, 306
AgsI TTSAA 6 cut(s) 34, 315, 522, 547, 572, 610
AjnI CCWGG 1 cut(s) 660
AjuI GAANNNNNNNTTGG 2 cut(s) 355, 387
AluBI AGCT 5 cut(s) 30, 151, 262, 410, 613
AluI AGCT 5 cut(s) 30, 151, 262, 410, 613
Alw21I GWGCWC 2 cut(s) 22, 568
Alw26I GTCTC 1 cut(s) 626
Alw44I GTGCAC 1 cut(s) 18
AlwNI CAGNNNCTG 1 cut(s) 239
AoxI GGCC 1 cut(s) 666
ApaLI GTGCAC 1 cut(s) 18
ApeKI GCWGC 2 cut(s) 441, 613
ApoI RAATTY 1 cut(s) 289
AseI ATTAAT 1 cut(s) 276
AspS9I GGNCC 1 cut(s) 666
AsuHPI GGTGA 2 cut(s) 400, 511
BaeGI GKGCMC 1 cut(s) 22
BanI GGYRCC 1 cut(s) 242
Bbv12I GWGCWC 2 cut(s) 22, 568
BbvCI CCTCAGC 1 cut(s) 258
BbvI GCAGC 2 cut(s) 453, 600
BceAI ACGGC 1 cut(s) 142
BcgI CGANNNNNNTGC 2 cut(s) 620, 654
BciT130I CCWGG 1 cut(s) 662
BcoDI GTCTC 1 cut(s) 626
BfaI CTAG 1 cut(s) 384
BisI GCNGC 2 cut(s) 442, 614
BlsI GCNGC 2 cut(s) 443, 615
Bme1390I CCNGG 1 cut(s) 662
BmgT120I GGNCC 1 cut(s) 666
BmiI GGNNCC 4 cut(s) 113, 244, 352, 667
BmrFI CCNGG 1 cut(s) 662
BmsI GCATC 2 cut(s) 585, 632
Bpu10I CCTNAGC 1 cut(s) 258
BsaI GGTCTC 1 cut(s) 626
BsaJI CCNNGG 1 cut(s) 661
BsaXI ACNNNNNCTCC 2 cut(s) 441, 471
Bse1I ACTGG 2 cut(s) 541, 636
BseBI CCWGG 1 cut(s) 662
BseDI CCNNGG 1 cut(s) 661
BseGI GGATG 3 cut(s) 94, 562, 600
BseMII CTCAG 1 cut(s) 272
BseNI ACTGG 2 cut(s) 541, 636
BseRI GAGGAG 1 cut(s) 104
BseSI GKGCMC 1 cut(s) 22
BseXI GCAGC 2 cut(s) 453, 600
BsgI GTGCAG 1 cut(s) 660
BshFI GGCC 1 cut(s) 668
BshNI GGYRCC 1 cut(s) 242
BsiHKAI GWGCWC 2 cut(s) 22, 568
BsiSI CCGG 1 cut(s) 438
BsmAI GTCTC 1 cut(s) 626
BsnI GGCC 1 cut(s) 668
Bso31I GGTCTC 1 cut(s) 626
Bsp1286I GDGCHC 2 cut(s) 22, 568
Bsp143I GATC 1 cut(s) 42
BspACI CCGC 1 cut(s) 328
BspANI GGCC 1 cut(s) 668
BspCNI CTCAG 1 cut(s) 271
BspLI GGNNCC 4 cut(s) 113, 244, 352, 667
BspQI GCTCTTC 1 cut(s) 573
BspT107I GGYRCC 1 cut(s) 242
BspTNI GGTCTC 1 cut(s) 626
BsrI ACTGG 2 cut(s) 541, 636
BssECI CCNNGG 1 cut(s) 661
BssMI GATC 1 cut(s) 42
Bst2UI CCWGG 1 cut(s) 662
Bst4CI ACNGT 4 cut(s) 17, 235, 300, 424
Bst6I CTCTTC 2 cut(s) 110, 573
BstC8I GCNNGC 1 cut(s) 82
BstDEI CTNAG 1 cut(s) 258
BstF5I GGATG 3 cut(s) 94, 562, 600
BstKTI GATC 1 cut(s) 45
BstMAI GTCTC 1 cut(s) 626
BstMBI GATC 1 cut(s) 42
BstMWI GCNNNNNNNGC 1 cut(s) 327
BstNI CCWGG 1 cut(s) 662
BstNSI RCATGY 2 cut(s) 26, 310
BstSCI CCNGG 1 cut(s) 660
BstSLI GKGCMC 1 cut(s) 22
BstV1I GCAGC 2 cut(s) 453, 600
BsuRI GGCC 1 cut(s) 668
BtsCI GGATG 3 cut(s) 94, 562, 600
BtsIMutI CAGTG 2 cut(s) 22, 643
Cac8I GCNNGC 1 cut(s) 82
CaiI CAGNNNCTG 1 cut(s) 239
Cfr13I GGNCC 1 cut(s) 666
Csp6I GTAC 1 cut(s) 533
CviAII CATG 5 cut(s) 23, 142, 307, 478, 484
CviJI RGCY 9 cut(s) 30, 80, 112, 151, 262, 410, 505, 613, 668
CviKI_1 RGCY 9 cut(s) 30, 80, 112, 151, 262, 410, 505, 613, 668
CviQI GTAC 1 cut(s) 533
DdeI CTNAG 1 cut(s) 258
DpnI GATC 1 cut(s) 44
DpnII GATC 1 cut(s) 42
Eam1104I CTCTTC 2 cut(s) 110, 573
EarI CTCTTC 2 cut(s) 110, 573
Eco31I GGTCTC 1 cut(s) 626
Eco57I CTGAAG 2 cut(s) 91, 638
EcoO109I RGGNCCY 1 cut(s) 666
EcoRI GAATTC 1 cut(s) 289
EcoRII CCWGG 1 cut(s) 660
FaeI CATG 5 cut(s) 26, 145, 310, 481, 487
FalI AAGNNNNNCTT 2 cut(s) 197, 229
FatI CATG 5 cut(s) 22, 141, 306, 477, 483
FauI CCCGC 1 cut(s) 335
FblI GTMKAC 1 cut(s) 282
Fnu4HI GCNGC 2 cut(s) 442, 614
FokI GGATG 3 cut(s) 101, 569, 607
Fsp4HI GCNGC 2 cut(s) 442, 614
FspBI CTAG 1 cut(s) 384
GluI GCNGC 2 cut(s) 442, 614
HaeIII GGCC 1 cut(s) 668
HapII CCGG 1 cut(s) 438
Hin1II CATG 5 cut(s) 26, 145, 310, 481, 487
HincII GTYRAC 1 cut(s) 283
HindII GTYRAC 1 cut(s) 283
HindIII AAGCTT 2 cut(s) 149, 408
HinfI GANTC 1 cut(s) 284
HpaII CCGG 1 cut(s) 438
HphI GGTGA 2 cut(s) 400, 511
Hpy166II GTNNAC 3 cut(s) 20, 283, 513
Hpy188I TCNGA 1 cut(s) 340
Hpy188III TCNNGA 4 cut(s) 40, 200, 572, 631
Hpy8I GTNNAC 3 cut(s) 20, 283, 513
HpyAV CCTTC 4 cut(s) 263, 547, 571, 613
HpyCH4III ACNGT 4 cut(s) 17, 235, 300, 424
HpyCH4IV ACGT 1 cut(s) 434
HpyCH4V TGCA 4 cut(s) 20, 190, 598, 641
HpyF10VI GCNNNNNNNGC 1 cut(s) 327
HpyF3I CTNAG 1 cut(s) 258
HpySE526I ACGT 1 cut(s) 434
Hsp92II CATG 5 cut(s) 26, 145, 310, 481, 487
Kzo9I GATC 1 cut(s) 42
LguI GCTCTTC 1 cut(s) 573
LmnI GCTCC 1 cut(s) 117
LpnPI CCDG 8 cut(s) 53, 94, 94, 225, 451, 554, 647, 649
Lsp1109I GCAGC 2 cut(s) 453, 600
LweI GCATC 2 cut(s) 585, 632
MaeI CTAG 1 cut(s) 384
MaeII ACGT 1 cut(s) 434
MaeIII GTNAC 2 cut(s) 388, 469
MalI GATC 1 cut(s) 44
MboI GATC 1 cut(s) 42
MboII GAAGA 4 cut(s) 97, 405, 408, 560
MhlI GDGCHC 2 cut(s) 22, 568
MluCI AATT 1 cut(s) 289
MlyI GAGTC 1 cut(s) 278
MmeI TCCRAC 1 cut(s) 36
MnlI CCTC 8 cut(s) 19, 125, 267, 391, 439, 443, 490, 595
MseI TTAA 2 cut(s) 276, 537
MslI CAYNNNNRTG 1 cut(s) 482
MspA1I CMGCKG 1 cut(s) 262
MspI CCGG 1 cut(s) 438
MspR9I CCNGG 1 cut(s) 662
MvaI CCWGG 1 cut(s) 662
MwoI GCNNNNNNNGC 1 cut(s) 327
NdeII GATC 1 cut(s) 42
NlaIII CATG 5 cut(s) 26, 145, 310, 481, 487
NlaIV GGNNCC 4 cut(s) 113, 244, 352, 667
NmuCI GTSAC 1 cut(s) 388
NspI RCATGY 2 cut(s) 26, 310
PciI ACATGT 2 cut(s) 22, 306
PciSI GCTCTTC 1 cut(s) 573
PkrI GCNGC 2 cut(s) 443, 615
PleI GAGTC 1 cut(s) 278
PpsI GAGTC 1 cut(s) 278
PscI ACATGT 2 cut(s) 22, 306
PshBI ATTAAT 1 cut(s) 276
Psp6I CCWGG 1 cut(s) 660
PspGI CCWGG 1 cut(s) 660
PspN4I GGNNCC 4 cut(s) 113, 244, 352, 667
PspPI GGNCC 1 cut(s) 666
PstNI CAGNNNCTG 1 cut(s) 239
PvuII CAGCTG 1 cut(s) 262
RsaI GTAC 1 cut(s) 534
RsaNI GTAC 1 cut(s) 533
RseI CAYNNNNRTG 1 cut(s) 482
SalI GTCGAC 1 cut(s) 281
SapI GCTCTTC 1 cut(s) 573
SaqAI TTAA 2 cut(s) 276, 537
SatI GCNGC 2 cut(s) 442, 614
Sau3AI GATC 1 cut(s) 42
Sau96I GGNCC 1 cut(s) 666
SchI GAGTC 1 cut(s) 278
ScrFI CCNGG 1 cut(s) 662
SduI GDGCHC 2 cut(s) 22, 568
SfaNI GCATC 2 cut(s) 585, 632
SmiMI CAYNNNNRTG 1 cut(s) 482
Sse9I AATT 1 cut(s) 289
SsiI CCGC 1 cut(s) 328
SspI AATATT 1 cut(s) 274
SspMI CTAG 1 cut(s) 384
StyD4I CCNGG 1 cut(s) 660
TaaI ACNGT 4 cut(s) 17, 235, 300, 424
TaiI ACGT 1 cut(s) 437
TaqI TCGA 4 cut(s) 45, 282, 287, 630
TasI AATT 1 cut(s) 289
TatI WGTACW 1 cut(s) 532
Tru1I TTAA 2 cut(s) 276, 537
Tru9I TTAA 2 cut(s) 276, 537
TscAI CASTG 2 cut(s) 22, 643
TseFI GTSAC 1 cut(s) 388
TseI GCWGC 2 cut(s) 441, 613
Tsp45I GTSAC 1 cut(s) 388
TspDTI ATGAA 1 cut(s) 575
TspRI CASTG 2 cut(s) 22, 643
VneI GTGCAC 1 cut(s) 18
VspI ATTAAT 1 cut(s) 276
XapI RAATTY 1 cut(s) 289
XceI RCATGY 2 cut(s) 26, 310
XcmI CCANNNNNNNNNTGG 1 cut(s) 658
XmiI GTMKAC 1 cut(s) 282
XspI CTAG 1 cut(s) 384
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.