Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

N/A

Physical Location & Seq

Genomic Coordinates Reverse (-)

9837725 .. 9838550

Gene Structure 826 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G059100.1_v2.0.a1.CDS.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 411 bp

ATGTCATTTTTGTCATTGAATTCTACCGAGTGTTTCCTTCTGCAATCTGGCTCCTCAATTTTCGCTTGGAATGGAAATCAATGCACCATTGAGCAGCAACAATTATTAGCAAAACTTGCAGAATTTTTGAAGATGCTAGCCCTAACCTCAGATCTGTTGCTTCTTGACAATTTTGACTATGTCTTTGTTCTCGTGAATCTGAAACTGTATAACTTTTGTTACACTTGGGTACTTGCAGCAGAAGCAAAAAGTGTAAATGCTTTCTCTGAAACAGATGGTTCTCAGGAAGTTACTGAAGTCAAGGAGACTGGTGAAGCACCGGCATCTGAAAGCAATGGGGATGATTCAGGACCAGAGCAAGAGACAATGCAGGATGAGAATGATAGTGAAAGTAATTACTTTCTGTTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001558 GO:0003674 GO:0003779 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005856 GO:0005884 GO:0006996 GO:0007010 GO:0007015 GO:0008064 GO:0008092 GO:0008150 GO:0009605 GO:0009606 GO:0009628 GO:0009629 GO:0009630 GO:0009987 GO:0010639 GO:0010817 GO:0015629 GO:0016043 GO:0022607 GO:0030029 GO:0030036 GO:0030832 GO:0030833 GO:0030834 GO:0030835 GO:0030837 GO:0031333 GO:0032271 GO:0032272 GO:0032432 GO:0032535 GO:0032879 GO:0032956 GO:0032970 GO:0033043 GO:0040008 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043242 GO:0043244 GO:0043254 GO:0044085 GO:0044087 GO:0044422 GO:0044424 GO:0044430 GO:0044446 GO:0044464 GO:0044877 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051014 GO:0051015 GO:0051017 GO:0051049 GO:0051128 GO:0051129 GO:0051493 GO:0051494 GO:0051693 GO:0061572 GO:0065007 GO:0065008 GO:0071840 GO:0090066 GO:0097435 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:0110053 GO:1901879 GO:1901880 GO:1902903 GO:1902904 GO:2000012

KEGG Pathways

Metabolic & Signaling

ko04666 ko04810 ko05203 map04666 map04810 map05203

Pfam Domains

Protein Families

Gelsolin VHP

Protein Analysis

137

Amino Acids

15.15

Weight (kDa)

4.05

Isoelectric Point (pI)

47.88

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	409
AcsI	RAATTY	2 cut(s)	19, 122
AcuI	CTGAAG	1 cut(s)	315
AfaI	GTAC	1 cut(s)	231
AgsI	TTSAA	2 cut(s)	19, 130
Alw26I	GTCTC	2 cut(s)	299, 356
ApeKI	GCWGC	2 cut(s)	94, 236
ApoI	RAATTY	2 cut(s)	19, 122
ArsI	GACNNNNNNTTYG	2 cut(s)	167, 199
AspS9I	GGNCC	1 cut(s)	350
AsuHPI	GGTGA	1 cut(s)	323
AsuNHI	GCTAGC	1 cut(s)	136
AvaII	GGWCC	1 cut(s)	350
BauI	CACGAG	1 cut(s)	191
BbvI	GCAGC	2 cut(s)	106, 248
BccI	CCATC	1 cut(s)	269
BcoDI	GTCTC	2 cut(s)	299, 356
BfaI	CTAG	1 cut(s)	137
BglII	AGATCT	1 cut(s)	151
BisI	GCNGC	2 cut(s)	95, 237
BlsI	GCNGC	2 cut(s)	96, 238
Bme18I	GGWCC	1 cut(s)	350
BmgT120I	GGNCC	1 cut(s)	350
BmiI	GGNNCC	1 cut(s)	52
BmsI	GCATC	2 cut(s)	123, 332
BmtI	GCTAGC	1 cut(s)	140
Bse118I	RCCGGY	1 cut(s)	319
Bse1I	ACTGG	1 cut(s)	313
Bse3DI	GCAATG	1 cut(s)	340
BseGI	GGATG	2 cut(s)	346, 379
BseMI	GCAATG	1 cut(s)	340
BseMII	CTCAG	2 cut(s)	162, 296
BseNI	ACTGG	1 cut(s)	313
BseRI	GAGGAG	1 cut(s)	43
BseXI	GCAGC	2 cut(s)	106, 248
BsiSI	CCGG	1 cut(s)	320
BsmAI	GTCTC	2 cut(s)	299, 356
Bsp143I	GATC	1 cut(s)	151
BspCNI	CTCAG	2 cut(s)	161, 295
BspLI	GGNNCC	1 cut(s)	52
BspOI	GCTAGC	1 cut(s)	140
BsrDI	GCAATG	1 cut(s)	340
BsrFI	RCCGGY	1 cut(s)	319
BsrI	ACTGG	1 cut(s)	313
BssAI	RCCGGY	1 cut(s)	319
BssMI	GATC	1 cut(s)	151
BssSI	CACGAG	1 cut(s)	191
Bst2BI	CACGAG	1 cut(s)	191
Bst4CI	ACNGT	1 cut(s)	207
BstAPI	GCANNNNNTGC	1 cut(s)	116
BstC8I	GCNNGC	1 cut(s)	138
BstDEI	CTNAG	2 cut(s)	148, 282
BstF5I	GGATG	2 cut(s)	346, 379
BstKTI	GATC	1 cut(s)	154
BstMAI	GTCTC	2 cut(s)	299, 356
BstMBI	GATC	1 cut(s)	151
BstMWI	GCNNNNNNNGC	2 cut(s)	116, 242
BstV1I	GCAGC	2 cut(s)	106, 248
BstX2I	RGATCY	1 cut(s)	151
BstYI	RGATCY	1 cut(s)	151
BtsCI	GGATG	2 cut(s)	346, 379
Cac8I	GCNNGC	1 cut(s)	138
Cfr10I	RCCGGY	1 cut(s)	319
Cfr13I	GGNCC	1 cut(s)	350
Csp6I	GTAC	1 cut(s)	230
CviJI	RGCY	2 cut(s)	51, 140
CviKI_1	RGCY	2 cut(s)	51, 140
CviQI	GTAC	1 cut(s)	230
DdeI	CTNAG	2 cut(s)	148, 282
DpnI	GATC	1 cut(s)	153
DpnII	GATC	1 cut(s)	151
Eco47I	GGWCC	1 cut(s)	350
Eco57I	CTGAAG	1 cut(s)	315
EcoRI	GAATTC	1 cut(s)	19
FaiI	YATR	3 cut(s)	180, 210, 409
Fnu4HI	GCNGC	2 cut(s)	95, 237
FokI	GGATG	2 cut(s)	353, 386
Fsp4HI	GCNGC	2 cut(s)	95, 237
FspBI	CTAG	1 cut(s)	137
GluI	GCNGC	2 cut(s)	95, 237
HapII	CCGG	1 cut(s)	320
HinfI	GANTC	2 cut(s)	196, 344
HpaII	CCGG	1 cut(s)	320
HphI	GGTGA	1 cut(s)	323
Hpy188I	TCNGA	4 cut(s)	151, 201, 268, 328
Hpy188III	TCNNGA	4 cut(s)	164, 193, 284, 348
HpyAV	CCTTC	1 cut(s)	47
HpyCH4III	ACNGT	1 cut(s)	207
HpyCH4V	TGCA	5 cut(s)	43, 84, 119, 236, 370
HpyF10VI	GCNNNNNNNGC	2 cut(s)	116, 242
HpyF3I	CTNAG	2 cut(s)	148, 282
Kzo9I	GATC	1 cut(s)	151
LmnI	GCTCC	1 cut(s)	56
LpnPI	CCDG	7 cut(s)	33, 269, 294, 333, 333, 356, 366
Lsp1109I	GCAGC	2 cut(s)	106, 248
LweI	GCATC	2 cut(s)	123, 332
MaeI	CTAG	1 cut(s)	137
MaeIII	GTNAC	2 cut(s)	218, 289
MalI	GATC	1 cut(s)	153
MboI	GATC	1 cut(s)	151
MboII	GAAGA	1 cut(s)	142
MflI	RGATCY	1 cut(s)	151
MluCI	AATT	6 cut(s)	19, 57, 101, 122, 169, 394
MnlI	CCTC	2 cut(s)	64, 157
MspI	CCGG	1 cut(s)	320
MwoI	GCNNNNNNNGC	2 cut(s)	116, 242
NdeII	GATC	1 cut(s)	151
NheI	GCTAGC	1 cut(s)	136
NlaIV	GGNNCC	1 cut(s)	52
PfeI	GAWTC	2 cut(s)	196, 344
PflFI	GACNNNGTC	1 cut(s)	179
PkrI	GCNGC	2 cut(s)	96, 238
PsiI	TTATAA	1 cut(s)	409
PspN4I	GGNNCC	1 cut(s)	52
PspPI	GGNCC	1 cut(s)	350
PsuI	RGATCY	1 cut(s)	151
PsyI	GACNNNGTC	1 cut(s)	179
RsaI	GTAC	1 cut(s)	231
RsaNI	GTAC	1 cut(s)	230
SatI	GCNGC	2 cut(s)	95, 237
Sau3AI	GATC	1 cut(s)	151
Sau96I	GGNCC	1 cut(s)	350
SetI	ASST	1 cut(s)	149
SfaNI	GCATC	2 cut(s)	123, 332
SinI	GGWCC	1 cut(s)	350
Sse9I	AATT	6 cut(s)	19, 57, 101, 122, 169, 394
SspMI	CTAG	1 cut(s)	137
TaaI	ACNGT	1 cut(s)	207
TasI	AATT	6 cut(s)	19, 57, 101, 122, 169, 394
TfiI	GAWTC	2 cut(s)	196, 344
TseI	GCWGC	2 cut(s)	94, 236
Tth111I	GACNNNGTC	1 cut(s)	179
VpaK11BI	GGWCC	1 cut(s)	350
XapI	RAATTY	2 cut(s)	19, 122
XspI	CTAG	1 cut(s)	137

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.