Prupe.7G066000_v2.0.a1

iron ion binding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
N/A
Physical Location & Seq
Forward (+)
10446745 .. 10448654
1910 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G066000.1_v2.0.a1.CDS.3

Sequence Viewer

Length: 1380 bp
ATGATTATAATGACAAGAGCTTCTTCATTTGTGTCACAGATGATGCTCCAAATAATCCGAAGTCCTTCCCTTCCTCTCTTCACTTCTCTGGTGCTCCTTGTTGTCCTTGCTATATACTGGAAGAGATTTAGAAGCCATACTTGTCCAATTGATCTTAGGTTGCCTCCAGAGCCATGGAAGCTACATCTGATTGGAAGCTTGCACCAGTTGGCTGGCTCTTTACAACATCATTGCCTGACAGACTTGGCCAAGAAGTATGGGCCTATCATGCACCTCAAACTGCCGCTTTCTCCGAACTGCCGGCCAGCGCTTATCTTTGTTCCTGATAATGATCACTGGAGAGAAATGAGAAAGGTTTGCATGCTTGAGCTCCTGAGCGCGAAACAGGTGTGGTCTTTTTCATCGATAAGAAACGAAGAGGCATCGAGTCTAGTTCAATCAATCTCCTCATCTGAGGGTCATCCTGTCAATCTTAGCGACATGATCTTCAACATGCAGAATTGCATTACTGCCCGTGCAGCCTTGGGGAAAAAGTGCAAACATCAACAAGAATTTATATCATTGGTGGAGGAAATGGGAAAGTTCGTGCTCCTCCGTTATGTCACTGGTTTGAAGCCTGCCTCGGAGAAAATACACCGAAAGATGGACAGGATTCTAGAGGAAGTCATCAATGACCTTAGAAAGAAAAGAAAGGCCGCCTTTGCATTATTAACCAACAAAAATAACAAAGAATCATGCCATCAGGAAGAAGAAGAAGATCTAGTTGATGTGCTTTTACAACTCCAGGAGTCTGGTGAACTCCAAATTGATCTCACAAACACCATAATCAAAGCTGTCACGCTGGACTTGTATTTTGCTGGAAGTGAGACTGCAGCGGCTACCACAGAATGGGCAATGTCAGAACTTGTGAGAAATCCTAGAGCAATGGAGAGCACAGGCGGAGATGATGATGAACAAAGCGGCTTATTATTACATAAAATTGGCATGTACGATATACCAAGTAAATCGAGAGTGTTAATCAATGCTTGGGGGATGTGGGAAAATCCTGATTGCTTTATGCCTGACAGGTTCCAAGGTTGTCGGGTTGATTTTCGAGGGAATGACTTCAAATTTATTCCATTTGGGGAGGTAAGAGAATGTGTACAGGCATATTATTTGGAACTACATCCGTTGAGCTTGCTTGCTCAACTGCTCTACCACTTTAACTGGAAACTCCCTCCCCCATCCCCTGTTGTCTTAAAAAATGCCTTTAATGCCACTCAAGAAGAAGAAGAACAAGAGCAACAGCAACAGCTTCAGCTTGACATGACGGAACCTATCAAGTTGGCTGCTATCAAGAAGAATGACTTGTATGTTATCGCCATTCCTTTCATTCCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00140 ko01100 ko04913 ko04917 ko04927 ko04934 map00140 map01100 map04913 map04917 map04927 map04934
Pfam Domains
Protein Families
p450

Protein Analysis

460

Amino Acids

52.53

Weight (kDa)

6.29

Isoelectric Point (pI)

52.53

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 8
AccB7I CCANNNNNTGG 1 cut(s) 888
AccII CGCG 1 cut(s) 380
AciI CCGC 5 cut(s) 284, 696, 875, 939, 960
AcoI YGGCCR 2 cut(s) 246, 302
AcsI RAATTY 2 cut(s) 551, 1109
AcuI CTGAAG 1 cut(s) 1280
AfaI GTAC 2 cut(s) 989, 1143
AfeI AGCGCT 1 cut(s) 309
AfiI CCNNNNNNNGG 2 cut(s) 643, 888
AgsI TTSAA 4 cut(s) 437, 490, 613, 1108
AjnI CCWGG 1 cut(s) 783
AluBI AGCT 8 cut(s) 20, 181, 198, 370, 833, 1176, 1294, 1300
AluI AGCT 8 cut(s) 20, 181, 198, 370, 833, 1176, 1294, 1300
Alw21I GWGCWC 4 cut(s) 96, 372, 591, 935
Alw26I GTCTC 1 cut(s) 860
Aor51HI AGCGCT 1 cut(s) 309
AoxI GGCC 4 cut(s) 246, 260, 302, 693
ApeKI GCWGC 3 cut(s) 518, 872, 1328
ApoI RAATTY 2 cut(s) 551, 1109
ArsI GACNNNNNNTTYG 2 cut(s) 836, 868
Asp700I GAANNNNTTC 2 cut(s) 64, 1103
AspLEI GCGC 2 cut(s) 310, 380
AspS9I GGNCC 1 cut(s) 260
AsuHPI GGTGA 1 cut(s) 806
BalI TGGCCA 1 cut(s) 248
BanII GRGCYC 1 cut(s) 372
Bbv12I GWGCWC 4 cut(s) 96, 372, 591, 935
BbvI GCAGC 3 cut(s) 530, 884, 1315
BccI CCATC 3 cut(s) 637, 747, 1231
BciT130I CCWGG 1 cut(s) 785
BclI TGATCA 1 cut(s) 331
BcoDI GTCTC 1 cut(s) 860
BfaI CTAG 4 cut(s) 431, 656, 761, 918
BfmI CTRYAG 1 cut(s) 870
BfoI RGCGCY 1 cut(s) 311
BglII AGATCT 1 cut(s) 757
BisI GCNGC 7 cut(s) 284, 519, 696, 873, 876, 961, 1329
BlsI GCNGC 7 cut(s) 285, 520, 697, 874, 877, 962, 1330
Bme1390I CCNGG 1 cut(s) 785
BmgT120I GGNCC 1 cut(s) 260
BmiI GGNNCC 2 cut(s) 1070, 1314
BmrFI CCNGG 1 cut(s) 785
BmsI GCATC 2 cut(s) 33, 431
BpmI CTGGAG 3 cut(s) 150, 358, 767
Bpu10I CCTNAGC 1 cut(s) 374
BpuEI CTTGAG 2 cut(s) 386, 1245
Bsa29I ATCGAT 1 cut(s) 404
BsaBI GATNNNNATC 1 cut(s) 330
BsaJI CCNNGG 4 cut(s) 173, 522, 621, 1072
Bsc4I CCNNNNNNNGG 2 cut(s) 643, 888
Bse118I RCCGGY 1 cut(s) 300
Bse1I ACTGG 5 cut(s) 122, 205, 341, 610, 1211
Bse3DI GCAATG 3 cut(s) 229, 900, 930
Bse8I GATNNNNATC 1 cut(s) 330
BseBI CCWGG 1 cut(s) 785
BseCI ATCGAT 1 cut(s) 404
BseDI CCNNGG 4 cut(s) 173, 522, 621, 1072
BseGI GGATG 4 cut(s) 460, 1038, 1165, 1223
BseJI GATNNNNATC 1 cut(s) 330
BseLI CCNNNNNNNGG 2 cut(s) 643, 888
BseMI GCAATG 3 cut(s) 229, 900, 930
BseMII CTCAG 2 cut(s) 365, 444
BseNI ACTGG 5 cut(s) 122, 205, 341, 610, 1211
BseRI GAGGAG 2 cut(s) 436, 581
BseXI GCAGC 3 cut(s) 530, 884, 1315
BsgI GTGCAG 1 cut(s) 537
Bsh1236I CGCG 1 cut(s) 380
BshFI GGCC 4 cut(s) 248, 262, 304, 695
BshVI ATCGAT 1 cut(s) 404
BsiHKAI GWGCWC 4 cut(s) 96, 372, 591, 935
BsiSI CCGG 1 cut(s) 301
BslI CCNNNNNNNGG 2 cut(s) 643, 888
BsmAI GTCTC 1 cut(s) 860
BsnI GGCC 4 cut(s) 248, 262, 304, 695
Bsp1286I GDGCHC 4 cut(s) 96, 372, 591, 935
Bsp1407I TGTACA 1 cut(s) 1141
Bsp143I GATC 5 cut(s) 151, 331, 483, 757, 808
Bsp19I CCATGG 1 cut(s) 173
BspACI CCGC 5 cut(s) 284, 696, 875, 939, 960
BspANI GGCC 4 cut(s) 248, 262, 304, 695
BspCNI CTCAG 2 cut(s) 366, 445
BspDI ATCGAT 1 cut(s) 404
BspFNI CGCG 1 cut(s) 380
BspLI GGNNCC 2 cut(s) 1070, 1314
BspMAI CTGCAG 1 cut(s) 874
BsrDI GCAATG 3 cut(s) 229, 900, 930
BsrFI RCCGGY 1 cut(s) 300
BsrGI TGTACA 1 cut(s) 1141
BsrI ACTGG 5 cut(s) 122, 205, 341, 610, 1211
BssAI RCCGGY 1 cut(s) 300
BssECI CCNNGG 4 cut(s) 173, 522, 621, 1072
BssMI GATC 5 cut(s) 151, 331, 483, 757, 808
BssT1I CCWWGG 3 cut(s) 173, 522, 1072
Bst2UI CCWGG 1 cut(s) 785
Bst6I CTCTTC 3 cut(s) 83, 116, 411
BstAUI TGTACA 1 cut(s) 1141
BstC8I GCNNGC 8 cut(s) 200, 214, 302, 306, 362, 618, 1178, 1182
BstDEI CTNAG 5 cut(s) 155, 374, 453, 473, 677
BstDSI CCRYGG 1 cut(s) 173
BstF5I GGATG 4 cut(s) 460, 1038, 1165, 1223
BstFNI CGCG 1 cut(s) 380
BstH2I RGCGCY 1 cut(s) 311
BstHHI GCGC 2 cut(s) 310, 380
BstKTI GATC 5 cut(s) 154, 334, 486, 760, 811
BstMAI GTCTC 1 cut(s) 860
BstMBI GATC 5 cut(s) 151, 331, 483, 757, 808
BstMWI GCNNNNNNNGC 6 cut(s) 169, 178, 268, 518, 701, 1253
BstNI CCWGG 1 cut(s) 785
BstNSI RCATGY 3 cut(s) 364, 496, 988
BstSCI CCNGG 1 cut(s) 783
BstSFI CTRYAG 1 cut(s) 870
BstUI CGCG 1 cut(s) 380
BstV1I GCAGC 3 cut(s) 530, 884, 1315
BstX2I RGATCY 1 cut(s) 757
BstXI CCANNNNNNTGG 3 cut(s) 174, 212, 791
BstYI RGATCY 1 cut(s) 757
Bsu15I ATCGAT 1 cut(s) 404
BsuRI GGCC 4 cut(s) 248, 262, 304, 695
BsuTUI ATCGAT 1 cut(s) 404
BtgI CCRYGG 1 cut(s) 173
BtsCI GGATG 4 cut(s) 460, 1038, 1165, 1223
BtsIMutI CAGTG 2 cut(s) 334, 603
Cac8I GCNNGC 8 cut(s) 200, 214, 302, 306, 362, 618, 1178, 1182
CfoI GCGC 2 cut(s) 310, 380
Cfr10I RCCGGY 1 cut(s) 300
Cfr13I GGNCC 1 cut(s) 260
ClaI ATCGAT 1 cut(s) 404
Csp6I GTAC 2 cut(s) 988, 1142
CviAII CATG 8 cut(s) 174, 268, 361, 481, 493, 735, 985, 1306
CviQI GTAC 2 cut(s) 988, 1142
DdeI CTNAG 5 cut(s) 155, 374, 453, 473, 677
DpnI GATC 5 cut(s) 153, 333, 485, 759, 810
DpnII GATC 5 cut(s) 151, 331, 483, 757, 808
EaeI YGGCCR 2 cut(s) 246, 302
Eam1104I CTCTTC 3 cut(s) 83, 116, 411
EarI CTCTTC 3 cut(s) 83, 116, 411
EciI GGCGGA 1 cut(s) 954
Ecl136II GAGCTC 1 cut(s) 370
Eco130I CCWWGG 3 cut(s) 173, 522, 1072
Eco24I GRGCYC 1 cut(s) 372
Eco47III AGCGCT 1 cut(s) 309
Eco53kI GAGCTC 1 cut(s) 370
Eco57I CTGAAG 1 cut(s) 1280
EcoICRI GAGCTC 1 cut(s) 370
EcoRII CCWGG 1 cut(s) 783
EcoT14I CCWWGG 3 cut(s) 173, 522, 1072
EcoT38I GRGCYC 1 cut(s) 372
ErhI CCWWGG 3 cut(s) 173, 522, 1072
FaeI CATG 8 cut(s) 177, 271, 364, 484, 496, 738, 988, 1309
FalI AAGNNNNNCTT 8 cut(s) 7, 39, 124, 156, 683, 715, 1331, 1363
FatI CATG 8 cut(s) 173, 267, 360, 480, 492, 734, 984, 1305
FbaI TGATCA 1 cut(s) 331
Fnu4HI GCNGC 7 cut(s) 284, 519, 696, 873, 876, 961, 1329
FokI GGATG 4 cut(s) 447, 1045, 1152, 1210
FriOI GRGCYC 1 cut(s) 372
Fsp4HI GCNGC 7 cut(s) 284, 519, 696, 873, 876, 961, 1329
FspBI CTAG 4 cut(s) 431, 656, 761, 918
GlaI GCGC 2 cut(s) 309, 379
GluI GCNGC 7 cut(s) 284, 519, 696, 873, 876, 961, 1329
GsuI CTGGAG 3 cut(s) 150, 358, 767
HaeII RGCGCY 1 cut(s) 311
HaeIII GGCC 4 cut(s) 248, 262, 304, 695
HapII CCGG 1 cut(s) 301
HhaI GCGC 2 cut(s) 310, 380
Hin1II CATG 8 cut(s) 177, 271, 364, 484, 496, 738, 988, 1309
Hin6I GCGC 2 cut(s) 308, 378
HinP1I GCGC 2 cut(s) 308, 378
HindIII AAGCTT 1 cut(s) 196
HinfI GANTC 4 cut(s) 427, 652, 731, 788
HpaII CCGG 1 cut(s) 301
HphI GGTGA 1 cut(s) 806
Hpy166II GTNNAC 2 cut(s) 797, 1142
Hpy188I TCNGA 6 cut(s) 59, 189, 294, 454, 625, 901
Hpy188III TCNNGA 9 cut(s) 167, 323, 373, 656, 743, 1008, 1046, 1262, 1336
Hpy8I GTNNAC 2 cut(s) 797, 1142
HpyAV CCTTC 2 cut(s) 75, 80
HpyCH4V TGCA 9 cut(s) 202, 271, 360, 496, 504, 518, 537, 704, 872
HpyF10VI GCNNNNNNNGC 6 cut(s) 169, 178, 268, 518, 701, 1253
HpyF3I CTNAG 5 cut(s) 155, 374, 453, 473, 677
Hsp92II CATG 8 cut(s) 177, 271, 364, 484, 496, 738, 988, 1309
HspAI GCGC 2 cut(s) 308, 378
KroI GCCGGC 1 cut(s) 300
KroNI GCCGGC 1 cut(s) 302
Ksp22I TGATCA 1 cut(s) 331
Kzo9I GATC 5 cut(s) 151, 331, 483, 757, 808
LmnI GCTCC 4 cut(s) 51, 99, 375, 594
Lsp1109I GCAGC 3 cut(s) 530, 884, 1315
LweI GCATC 2 cut(s) 33, 431
MaeI CTAG 4 cut(s) 431, 656, 761, 918
MaeIII GTNAC 3 cut(s) 33, 601, 835
MalI GATC 5 cut(s) 153, 333, 485, 759, 810
MboI GATC 5 cut(s) 151, 331, 483, 757, 808
MfeI CAATTG 1 cut(s) 147
MflI RGATCY 1 cut(s) 757
MhlI GDGCHC 4 cut(s) 96, 372, 591, 935
MlsI TGGCCA 1 cut(s) 248
MluCI AATT 6 cut(s) 147, 499, 551, 804, 978, 1109
MluNI TGGCCA 1 cut(s) 248
MlyI GAGTC 2 cut(s) 436, 797
Mox20I TGGCCA 1 cut(s) 248
MroNI GCCGGC 1 cut(s) 300
MroXI GAANNNNTTC 2 cut(s) 64, 1103
MscI TGGCCA 1 cut(s) 248
MseI TTAA 5 cut(s) 710, 1016, 1203, 1238, 1251
Msp20I TGGCCA 1 cut(s) 248
MspA1I CMGCKG 1 cut(s) 875
MspI CCGG 1 cut(s) 301
MspR9I CCNGG 1 cut(s) 785
MunI CAATTG 1 cut(s) 147
MvaI CCWGG 1 cut(s) 785
MvnI CGCG 1 cut(s) 380
MwoI GCNNNNNNNGC 6 cut(s) 169, 178, 268, 518, 701, 1253
NaeI GCCGGC 1 cut(s) 302
NcoI CCATGG 1 cut(s) 173
NdeII GATC 5 cut(s) 151, 331, 483, 757, 808
NgoMIV GCCGGC 1 cut(s) 300
NlaIII CATG 8 cut(s) 177, 271, 364, 484, 496, 738, 988, 1309
NlaIV GGNNCC 2 cut(s) 1070, 1314
NmuCI GTSAC 3 cut(s) 33, 601, 835
NspI RCATGY 3 cut(s) 364, 496, 988
PaeI GCATGC 1 cut(s) 364
PdiI GCCGGC 1 cut(s) 302
PdmI GAANNNNTTC 2 cut(s) 64, 1103
PfeI GAWTC 2 cut(s) 652, 731
PflMI CCANNNNNTGG 1 cut(s) 888
PfoI TCCNGGA 1 cut(s) 783
PkrI GCNGC 7 cut(s) 285, 520, 697, 874, 877, 962, 1330
PleI GAGTC 2 cut(s) 435, 796
PpsI GAGTC 2 cut(s) 435, 796
PsiI TTATAA 1 cut(s) 8
Psp124BI GAGCTC 1 cut(s) 372
Psp6I CCWGG 1 cut(s) 783
PspGI CCWGG 1 cut(s) 783
PspN4I GGNNCC 2 cut(s) 1070, 1314
PspPI GGNCC 1 cut(s) 260
PstI CTGCAG 1 cut(s) 874
PsuI RGATCY 1 cut(s) 757
RsaI GTAC 2 cut(s) 989, 1143
RsaNI GTAC 2 cut(s) 988, 1142
SacI GAGCTC 1 cut(s) 372
SaqAI TTAA 5 cut(s) 710, 1016, 1203, 1238, 1251
SatI GCNGC 7 cut(s) 284, 519, 696, 873, 876, 961, 1329
Sau3AI GATC 5 cut(s) 151, 331, 483, 757, 808
Sau96I GGNCC 1 cut(s) 260
SchI GAGTC 2 cut(s) 436, 797
ScrFI CCNGG 1 cut(s) 785
SduI GDGCHC 4 cut(s) 96, 372, 591, 935
SfaNI GCATC 2 cut(s) 33, 431
SfcI CTRYAG 1 cut(s) 870
SmlI CTYRAG 2 cut(s) 365, 1260
SmoI CTYRAG 2 cut(s) 365, 1260
SphI GCATGC 1 cut(s) 364
Sse9I AATT 6 cut(s) 147, 499, 551, 804, 978, 1109
SsiI CCGC 5 cut(s) 284, 696, 875, 939, 960
SspMI CTAG 4 cut(s) 431, 656, 761, 918
SstI GAGCTC 1 cut(s) 372
StyD4I CCNGG 1 cut(s) 783
StyI CCWWGG 3 cut(s) 173, 522, 1072
TaqI TCGA 4 cut(s) 404, 425, 1007, 1093
TasI AATT 6 cut(s) 147, 499, 551, 804, 978, 1109
TatI WGTACW 1 cut(s) 1141
TauI GCSGC 4 cut(s) 286, 698, 878, 963
TfiI GAWTC 2 cut(s) 652, 731
Tru1I TTAA 5 cut(s) 710, 1016, 1203, 1238, 1251
Tru9I TTAA 5 cut(s) 710, 1016, 1203, 1238, 1251
TscAI CASTG 2 cut(s) 341, 610
TseFI GTSAC 3 cut(s) 33, 601, 835
TseI GCWGC 3 cut(s) 518, 872, 1328
Tsp45I GTSAC 3 cut(s) 33, 601, 835
TspDTI ATGAA 4 cut(s) 15, 390, 966, 1360
TspGWI ACGGA 3 cut(s) 584, 1158, 1325
TspRI CASTG 2 cut(s) 341, 610
Van91I CCANNNNNTGG 1 cut(s) 888
XapI RAATTY 2 cut(s) 551, 1109
XbaI TCTAGA 1 cut(s) 655
XceI RCATGY 3 cut(s) 364, 496, 988
XmnI GAANNNNTTC 2 cut(s) 64, 1103
XspI CTAG 4 cut(s) 431, 656, 761, 918
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.