Prupe.7G067400_v2.0.a1

Olee1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
N/A
Physical Location & Seq
Reverse (-)
10526917 .. 10528199
1283 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G067400.1_v2.0.a1.CDS.1

Sequence Viewer

Length: 621 bp
ATGGAAAAGCATTCTAGTACCTTTGCCCTTGTTTCTGCCCTTTGCTTCTCGGCCCTCCTCGGTTTTGCTTGCTGTGAAAACCCAGATTCAATCTATGTTATTGGCCTGGTTTACTGTGACAACTGCCATGTCGGTTTTCCTACCACGTCTAGTAAGGTGATCGAAGGCGCAGAGGTACACCTGGAATGCAGCGACAAGAAAGGCGGAGCACCAACATACAGGGCATGGAAGAAGAGTAATTCTGAAGGAATGTACGAATTCGAAGTGACCAAGAAAGTAAATGTGAACAGCTACTGTGAAATCTTTGCTTTCGAGAGCAACCTTGATGACTGCAGAAACATTGTCCACGATGACGCTAGCCAAGAGCTGAAGCTAAAATTCACCAAGCCTAGCCCGAATGATAAACGGATCGTTGCCTTCGGGAACAAGCGCTTTGCTGCCCCGATTTCCTTTCAACCCGATCAGCCTCTTCAAAACTGCGCTGAGCACCACAACGAAGAAGAACATGACAAGGAGGAGGAGGGTGATCCGCGGCACAAACATGAAGAAGAACATACTGAGGAGGGGGATGCTCCTCAGCATCAACATGAAGATGAACATGAACACGAGGAGGCCCATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pollen_Ole_e_I

Protein Analysis

207

Amino Acids

23.36

Weight (kDa)

5.0

Isoelectric Point (pI)

52.06

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 532
AciI CCGC 3 cut(s) 204, 530, 532
AclWI GGATC 2 cut(s) 416, 521
AcsI RAATTY 2 cut(s) 257, 377
AcuI CTGAAG 2 cut(s) 264, 389
AfaI GTAC 3 cut(s) 19, 177, 254
AfeI AGCGCT 1 cut(s) 431
AgsI TTSAA 3 cut(s) 90, 455, 473
AjiI CACGTC 1 cut(s) 147
AjnI CCWGG 2 cut(s) 105, 180
AluBI AGCT 3 cut(s) 291, 367, 373
AluI AGCT 3 cut(s) 291, 367, 373
Alw21I GWGCWC 2 cut(s) 211, 489
AlwI GGATC 2 cut(s) 416, 521
AlwNI CAGNNNCTG 1 cut(s) 294
Aor51HI AGCGCT 1 cut(s) 431
AoxI GGCC 3 cut(s) 51, 103, 612
ApeKI GCWGC 2 cut(s) 189, 437
ApoI RAATTY 2 cut(s) 257, 377
AspLEI GCGC 3 cut(s) 170, 432, 482
AspS9I GGNCC 2 cut(s) 52, 613
AsuHPI GGTGA 3 cut(s) 169, 373, 536
AsuII TTCGAA 1 cut(s) 261
AsuNHI GCTAGC 1 cut(s) 356
BauI CACGAG 1 cut(s) 605
Bbv12I GWGCWC 2 cut(s) 211, 489
BbvCI CCTCAGC 1 cut(s) 576
BbvI GCAGC 2 cut(s) 201, 424
BciT130I CCWGG 2 cut(s) 107, 182
BfaI CTAG 4 cut(s) 15, 150, 357, 390
BfmI CTRYAG 1 cut(s) 331
BfoI RGCGCY 1 cut(s) 433
BisI GCNGC 3 cut(s) 190, 438, 533
BlpI GCTNAGC 1 cut(s) 483
BlsI GCNGC 3 cut(s) 191, 439, 534
Bme1390I CCNGG 2 cut(s) 107, 182
BmgBI CACGTC 1 cut(s) 147
BmgT120I GGNCC 2 cut(s) 52, 613
BmrFI CCNGG 2 cut(s) 107, 182
BmsI GCATC 2 cut(s) 559, 589
BmtI GCTAGC 1 cut(s) 360
Bpu10I CCTNAGC 1 cut(s) 576
Bpu1102I GCTNAGC 1 cut(s) 483
Bpu14I TTCGAA 1 cut(s) 261
BsaJI CCNNGG 2 cut(s) 58, 530
BseBI CCWGG 2 cut(s) 107, 182
BseDI CCNNGG 2 cut(s) 58, 530
BseGI GGATG 1 cut(s) 574
BseMII CTCAG 3 cut(s) 474, 549, 590
BseRI GAGGAG 5 cut(s) 47, 530, 533, 564, 575
BseXI GCAGC 2 cut(s) 201, 424
Bsh1236I CGCG 1 cut(s) 532
BshFI GGCC 3 cut(s) 53, 105, 614
BsiHKAI GWGCWC 2 cut(s) 211, 489
BsmI GAATGC 2 cut(s) 10, 191
BsnI GGCC 3 cut(s) 53, 105, 614
Bsp119I TTCGAA 1 cut(s) 261
Bsp1286I GDGCHC 2 cut(s) 211, 489
Bsp143I GATC 4 cut(s) 159, 408, 460, 526
Bsp1720I GCTNAGC 1 cut(s) 483
BspACI CCGC 3 cut(s) 204, 530, 532
BspANI GGCC 3 cut(s) 53, 105, 614
BspCNI CTCAG 3 cut(s) 475, 550, 589
BspFNI CGCG 1 cut(s) 532
BspMAI CTGCAG 1 cut(s) 335
BspOI GCTAGC 1 cut(s) 360
BspPI GGATC 2 cut(s) 416, 521
BspT104I TTCGAA 1 cut(s) 261
BssECI CCNNGG 2 cut(s) 58, 530
BssMI GATC 4 cut(s) 159, 408, 460, 526
BssSI CACGAG 1 cut(s) 605
Bst2BI CACGAG 1 cut(s) 605
Bst2UI CCWGG 2 cut(s) 107, 182
Bst4CI ACNGT 2 cut(s) 116, 296
Bst6I CTCTTC 2 cut(s) 227, 474
BstBI TTCGAA 1 cut(s) 261
BstC8I GCNNGC 2 cut(s) 70, 358
BstDEI CTNAG 3 cut(s) 483, 558, 576
BstDSI CCRYGG 1 cut(s) 530
BstF5I GGATG 1 cut(s) 574
BstFNI CGCG 1 cut(s) 532
BstH2I RGCGCY 1 cut(s) 433
BstHHI GCGC 3 cut(s) 170, 432, 482
BstKTI GATC 4 cut(s) 162, 411, 463, 529
BstMBI GATC 4 cut(s) 159, 408, 460, 526
BstNI CCWGG 2 cut(s) 107, 182
BstSCI CCNGG 2 cut(s) 105, 180
BstSFI CTRYAG 1 cut(s) 331
BstUI CGCG 1 cut(s) 532
BstV1I GCAGC 2 cut(s) 201, 424
BsuRI GGCC 3 cut(s) 53, 105, 614
BtgI CCRYGG 1 cut(s) 530
BtrI CACGTC 1 cut(s) 147
BtsCI GGATG 1 cut(s) 574
Cac8I GCNNGC 2 cut(s) 70, 358
CaiI CAGNNNCTG 1 cut(s) 294
CfoI GCGC 3 cut(s) 170, 432, 482
Cfr13I GGNCC 2 cut(s) 52, 613
Cfr42I CCGCGG 1 cut(s) 533
CseI GACGC 1 cut(s) 362
Csp6I GTAC 3 cut(s) 18, 176, 253
CviAII CATG 6 cut(s) 128, 225, 506, 542, 587, 599
CviQI GTAC 3 cut(s) 18, 176, 253
DdeI CTNAG 3 cut(s) 483, 558, 576
DpnI GATC 4 cut(s) 161, 410, 462, 528
DpnII GATC 4 cut(s) 159, 408, 460, 526
Eam1104I CTCTTC 2 cut(s) 227, 474
EarI CTCTTC 2 cut(s) 227, 474
EciI GGCGGA 1 cut(s) 219
Eco47III AGCGCT 1 cut(s) 431
Eco57I CTGAAG 2 cut(s) 264, 389
EcoRI GAATTC 1 cut(s) 257
EcoRII CCWGG 2 cut(s) 105, 180
FaeI CATG 6 cut(s) 131, 228, 509, 545, 590, 602
FaiI YATR 9 cut(s) 96, 129, 217, 226, 507, 543, 555, 588, 600
FatI CATG 6 cut(s) 127, 224, 505, 541, 586, 598
Fnu4HI GCNGC 3 cut(s) 190, 438, 533
FokI GGATG 1 cut(s) 581
Fsp4HI GCNGC 3 cut(s) 190, 438, 533
FspBI CTAG 4 cut(s) 15, 150, 357, 390
GlaI GCGC 3 cut(s) 169, 431, 481
GluI GCNGC 3 cut(s) 190, 438, 533
HaeII RGCGCY 1 cut(s) 433
HaeIII GGCC 3 cut(s) 53, 105, 614
HgaI GACGC 1 cut(s) 362
HhaI GCGC 3 cut(s) 170, 432, 482
Hin1II CATG 6 cut(s) 131, 228, 509, 545, 590, 602
Hin6I GCGC 3 cut(s) 168, 430, 480
HinP1I GCGC 3 cut(s) 168, 430, 480
HinfI GANTC 1 cut(s) 86
HphI GGTGA 3 cut(s) 169, 373, 536
Hpy166II GTNNAC 4 cut(s) 112, 178, 286, 346
Hpy188I TCNGA 1 cut(s) 244
Hpy188III TCNNGA 2 cut(s) 313, 421
Hpy8I GTNNAC 4 cut(s) 112, 178, 286, 346
HpyAV CCTTC 3 cut(s) 158, 239, 427
HpyCH4III ACNGT 2 cut(s) 116, 296
HpyCH4IV ACGT 1 cut(s) 146
HpyCH4V TGCA 2 cut(s) 189, 333
HpyF3I CTNAG 3 cut(s) 483, 558, 576
HpySE526I ACGT 1 cut(s) 146
Hsp92II CATG 6 cut(s) 131, 228, 509, 545, 590, 602
HspAI GCGC 3 cut(s) 168, 430, 480
KspI CCGCGG 1 cut(s) 533
Kzo9I GATC 4 cut(s) 159, 408, 460, 526
LmnI GCTCC 2 cut(s) 206, 577
LpnPI CCDG 6 cut(s) 92, 96, 119, 167, 194, 205
Lsp1109I GCAGC 2 cut(s) 201, 424
LweI GCATC 2 cut(s) 559, 589
MaeI CTAG 4 cut(s) 15, 150, 357, 390
MaeII ACGT 1 cut(s) 146
MaeIII GTNAC 2 cut(s) 116, 265
MalI GATC 4 cut(s) 161, 410, 462, 528
MboI GATC 4 cut(s) 159, 408, 460, 526
MboII GAAGA 8 cut(s) 241, 244, 461, 509, 512, 557, 560, 602
MhlI GDGCHC 2 cut(s) 211, 489
MluCI AATT 3 cut(s) 238, 257, 377
MseI TTAA 1 cut(s) 619
MslI CAYNNNNRTG 3 cut(s) 540, 585, 591
MspA1I CMGCKG 1 cut(s) 532
MspR9I CCNGG 2 cut(s) 107, 182
Mva1269I GAATGC 2 cut(s) 10, 191
MvaI CCWGG 2 cut(s) 107, 182
MvnI CGCG 1 cut(s) 532
NdeII GATC 4 cut(s) 159, 408, 460, 526
NheI GCTAGC 1 cut(s) 356
NlaIII CATG 6 cut(s) 131, 228, 509, 545, 590, 602
NmeAIII GCCGAG 1 cut(s) 29
NmuCI GTSAC 2 cut(s) 116, 265
NspV TTCGAA 1 cut(s) 261
PctI GAATGC 2 cut(s) 10, 191
PfeI GAWTC 1 cut(s) 86
PkrI GCNGC 3 cut(s) 191, 439, 534
Psp6I CCWGG 2 cut(s) 105, 180
PspGI CCWGG 2 cut(s) 105, 180
PspPI GGNCC 2 cut(s) 52, 613
PstI CTGCAG 1 cut(s) 335
PstNI CAGNNNCTG 1 cut(s) 294
RsaI GTAC 3 cut(s) 19, 177, 254
RsaNI GTAC 3 cut(s) 18, 176, 253
RseI CAYNNNNRTG 3 cut(s) 540, 585, 591
SacII CCGCGG 1 cut(s) 533
SaqAI TTAA 1 cut(s) 619
SatI GCNGC 3 cut(s) 190, 438, 533
Sau3AI GATC 4 cut(s) 159, 408, 460, 526
Sau96I GGNCC 2 cut(s) 52, 613
ScrFI CCNGG 2 cut(s) 107, 182
SduI GDGCHC 2 cut(s) 211, 489
SetI ASST 9 cut(s) 23, 149, 159, 177, 183, 293, 324, 369, 375
SfaNI GCATC 2 cut(s) 559, 589
SfcI CTRYAG 1 cut(s) 331
Sfr303I CCGCGG 1 cut(s) 533
SfuI TTCGAA 1 cut(s) 261
SgrBI CCGCGG 1 cut(s) 533
SmiMI CAYNNNNRTG 3 cut(s) 540, 585, 591
Sse9I AATT 3 cut(s) 238, 257, 377
SsiI CCGC 3 cut(s) 204, 530, 532
SspMI CTAG 4 cut(s) 15, 150, 357, 390
StyD4I CCNGG 2 cut(s) 105, 180
TaaI ACNGT 2 cut(s) 116, 296
TaiI ACGT 1 cut(s) 149
TaqI TCGA 3 cut(s) 162, 261, 312
TasI AATT 3 cut(s) 238, 257, 377
TauI GCSGC 1 cut(s) 535
TfiI GAWTC 1 cut(s) 86
Tru1I TTAA 1 cut(s) 619
Tru9I TTAA 1 cut(s) 619
TseFI GTSAC 2 cut(s) 116, 265
TseI GCWGC 2 cut(s) 189, 437
Tsp45I GTSAC 2 cut(s) 116, 265
TspDTI ATGAA 4 cut(s) 558, 603, 609, 615
TspGWI ACGGA 1 cut(s) 421
XapI RAATTY 2 cut(s) 257, 377
XspI CTAG 4 cut(s) 15, 150, 357, 390
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.