Prupe.7G072000_v2.0.a1

Cytochrome p450

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
N/A
Physical Location & Seq
Forward (+)
10945069 .. 10946430
1362 bp
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UTR
Exon/CDS
Intron
Prupe.7G072000.1_v2.0.a1.CDS.3

Sequence Viewer

Length: 462 bp
ATGAAACGAGCTTACGAAATATCGGATACTGCTAACCTTCCCTACCTCCAAGCAATAGTAAAGGAAACACTGAGGCTTCACCCAGCAGGCCCAATGGTTGTATGGGAGAGCACAGAAGAGTGTACTGTCAATGGCTATACTATTCCAGCAAAGACCAGGCTCTTTGTGAATGTGTGGGCTATCAATAGGGACCCAACTCATTGGGAGAACCCACTTGAGTTCCAGCCAGAGAGGTTTCTTGCTGAGGAGGGCAGTGGGAAGAGCCCTTTGGATGTGAGGGGGCAGCATTTTCATTTTCTGCCTTTCTGTCCTGGAACTACCTTATCTCTTCAGGTTGTGCAGGCAACTGTTAGGGGTGGAGTTTCTGTGAACATGGAAGAGGCGCCTGGGATCACGGTTCCTAGGGCTCATCCCTTGGTTTGTGTCCCTGTGGCCAGGCTTAGCCCATTTCCAGCAACCTGA

Protein Analysis

154

Amino Acids

16.99

Weight (kDa)

6.19

Isoelectric Point (pI)

45.18

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 382
AclWI GGATC 1 cut(s) 398
AcoI YGGCCR 1 cut(s) 432
AcuI CTGAAG 1 cut(s) 314
AcyI GRCGYC 1 cut(s) 383
AfaI GTAC 1 cut(s) 124
AjnI CCWGG 4 cut(s) 155, 310, 385, 434
AjuI GAANNNNNNNTTGG 2 cut(s) 251, 283
AluBI AGCT 1 cut(s) 11
AluI AGCT 1 cut(s) 11
Alw21I GWGCWC 1 cut(s) 113
AlwI GGATC 1 cut(s) 398
AoxI GGCC 2 cut(s) 88, 432
ApeKI GCWGC 1 cut(s) 283
AspA2I CCTAGG 1 cut(s) 401
AspLEI GCGC 1 cut(s) 385
AspS9I GGNCC 2 cut(s) 89, 190
AsuHPI GGTGA 1 cut(s) 71
AvaII GGWCC 1 cut(s) 190
AvrII CCTAGG 1 cut(s) 401
BalI TGGCCA 1 cut(s) 434
BanI GGYRCC 1 cut(s) 382
BanII GRGCYC 2 cut(s) 266, 409
Bbv12I GWGCWC 1 cut(s) 113
BbvCI CCTCAGC 1 cut(s) 243
BbvI GCAGC 1 cut(s) 295
BciT130I CCWGG 4 cut(s) 157, 312, 387, 436
BciVI GTATCC 1 cut(s) 19
BfaI CTAG 1 cut(s) 402
BfoI RGCGCY 1 cut(s) 386
BfuI GTATCC 1 cut(s) 19
BisI GCNGC 1 cut(s) 284
BlnI CCTAGG 1 cut(s) 401
BlpI GCTNAGC 1 cut(s) 440
BlsI GCNGC 1 cut(s) 285
Bme1390I CCNGG 4 cut(s) 157, 312, 387, 436
Bme18I GGWCC 1 cut(s) 190
BmgT120I GGNCC 2 cut(s) 89, 190
BmiI GGNNCC 4 cut(s) 191, 192, 384, 399
BmrFI CCNGG 4 cut(s) 157, 312, 387, 436
Bpu10I CCTNAGC 1 cut(s) 243
Bpu1102I GCTNAGC 1 cut(s) 440
BpuEI CTTGAG 1 cut(s) 236
BsaHI GRCGYC 1 cut(s) 383
BsaJI CCNNGG 3 cut(s) 386, 401, 414
BsaXI ACNNNNNCTCC 2 cut(s) 351, 381
BseBI CCWGG 4 cut(s) 157, 312, 387, 436
BseDI CCNNGG 3 cut(s) 386, 401, 414
BseGI GGATG 2 cut(s) 277, 409
BseMII CTCAG 2 cut(s) 62, 234
BseRI GAGGAG 1 cut(s) 260
BseXI GCAGC 1 cut(s) 295
BseYI CCCAGC 1 cut(s) 82
BsgI GTGCAG 1 cut(s) 359
BshFI GGCC 2 cut(s) 90, 434
BshNI GGYRCC 1 cut(s) 382
BsiHKAI GWGCWC 1 cut(s) 113
BslFI GGGAC 2 cut(s) 203, 410
BsmFI GGGAC 2 cut(s) 203, 410
BsnI GGCC 2 cut(s) 90, 434
Bsp1286I GDGCHC 3 cut(s) 113, 266, 409
Bsp143I GATC 1 cut(s) 390
Bsp1720I GCTNAGC 1 cut(s) 440
BspANI GGCC 2 cut(s) 90, 434
BspCNI CTCAG 2 cut(s) 63, 235
BspLI GGNNCC 4 cut(s) 191, 192, 384, 399
BspPI GGATC 1 cut(s) 398
BspQI GCTCTTC 1 cut(s) 254
BspT107I GGYRCC 1 cut(s) 382
BssECI CCNNGG 3 cut(s) 386, 401, 414
BssMI GATC 1 cut(s) 390
BssNI GRCGYC 1 cut(s) 383
BssT1I CCWWGG 2 cut(s) 401, 414
Bst2UI CCWGG 4 cut(s) 157, 312, 387, 436
Bst4CI ACNGT 3 cut(s) 127, 349, 397
Bst6I CTCTTC 4 cut(s) 111, 254, 333, 372
BstACI GRCGYC 1 cut(s) 383
BstC8I GCNNGC 2 cut(s) 88, 342
BstDEI CTNAG 3 cut(s) 71, 243, 440
BstF5I GGATG 2 cut(s) 277, 409
BstH2I RGCGCY 1 cut(s) 386
BstHHI GCGC 1 cut(s) 385
BstKTI GATC 1 cut(s) 393
BstMBI GATC 1 cut(s) 390
BstNI CCWGG 4 cut(s) 157, 312, 387, 436
BstSCI CCNGG 4 cut(s) 155, 310, 385, 434
BstV1I GCAGC 1 cut(s) 295
BstXI CCANNNNNNTGG 1 cut(s) 201
BsuI GTATCC 1 cut(s) 19
BsuRI GGCC 2 cut(s) 90, 434
BtsCI GGATG 2 cut(s) 277, 409
BtsI GCAGTG 1 cut(s) 259
BtsIMutI CAGTG 2 cut(s) 68, 259
Cac8I GCNNGC 2 cut(s) 88, 342
CfoI GCGC 1 cut(s) 385
Cfr13I GGNCC 2 cut(s) 89, 190
Csp6I GTAC 1 cut(s) 123
CviAII CATG 1 cut(s) 373
CviQI GTAC 1 cut(s) 123
DdeI CTNAG 3 cut(s) 71, 243, 440
DinI GGCGCC 1 cut(s) 384
DpnI GATC 1 cut(s) 392
DpnII GATC 1 cut(s) 390
EaeI YGGCCR 1 cut(s) 432
Eam1104I CTCTTC 4 cut(s) 111, 254, 333, 372
EarI CTCTTC 4 cut(s) 111, 254, 333, 372
Eco130I CCWWGG 2 cut(s) 401, 414
Eco24I GRGCYC 2 cut(s) 266, 409
Eco47I GGWCC 1 cut(s) 190
Eco57I CTGAAG 1 cut(s) 314
EcoO109I RGGNCCY 1 cut(s) 190
EcoRII CCWGG 4 cut(s) 155, 310, 385, 434
EcoT14I CCWWGG 2 cut(s) 401, 414
EcoT38I GRGCYC 2 cut(s) 266, 409
EgeI GGCGCC 1 cut(s) 384
EheI GGCGCC 1 cut(s) 384
ErhI CCWWGG 2 cut(s) 401, 414
FaeI CATG 1 cut(s) 376
FaiI YATR 3 cut(s) 103, 138, 374
FaqI GGGAC 2 cut(s) 203, 410
FatI CATG 1 cut(s) 372
Fnu4HI GCNGC 1 cut(s) 284
FokI GGATG 2 cut(s) 284, 396
FriOI GRGCYC 2 cut(s) 266, 409
Fsp4HI GCNGC 1 cut(s) 284
FspBI CTAG 1 cut(s) 402
GlaI GCGC 1 cut(s) 384
GluI GCNGC 1 cut(s) 284
GsaI CCCAGC 1 cut(s) 86
HaeII RGCGCY 1 cut(s) 386
HaeIII GGCC 2 cut(s) 90, 434
HhaI GCGC 1 cut(s) 385
Hin1I GRCGYC 1 cut(s) 383
Hin1II CATG 1 cut(s) 376
Hin6I GCGC 1 cut(s) 383
HinP1I GCGC 1 cut(s) 383
HphI GGTGA 1 cut(s) 71
Hpy166II GTNNAC 2 cut(s) 123, 370
Hpy188I TCNGA 1 cut(s) 25
Hpy8I GTNNAC 2 cut(s) 123, 370
HpyAV CCTTC 1 cut(s) 47
HpyCH4III ACNGT 3 cut(s) 127, 349, 397
HpyCH4V TGCA 1 cut(s) 340
HpyF3I CTNAG 3 cut(s) 71, 243, 440
Hsp92I GRCGYC 1 cut(s) 383
Hsp92II CATG 1 cut(s) 376
HspAI GCGC 1 cut(s) 383
KasI GGCGCC 1 cut(s) 382
KflI GGGWCCC 1 cut(s) 190
Kzo9I GATC 1 cut(s) 390
LguI GCTCTTC 1 cut(s) 254
Lsp1109I GCAGC 1 cut(s) 295
MaeI CTAG 1 cut(s) 402
MalI GATC 1 cut(s) 392
MboI GATC 1 cut(s) 390
MboII GAAGA 4 cut(s) 128, 271, 320, 389
MhlI GDGCHC 3 cut(s) 113, 266, 409
MlsI TGGCCA 1 cut(s) 434
MluNI TGGCCA 1 cut(s) 434
Mly113I GGCGCC 1 cut(s) 383
MnlI CCTC 7 cut(s) 56, 66, 225, 238, 241, 270, 373
Mox20I TGGCCA 1 cut(s) 434
MscI TGGCCA 1 cut(s) 434
Msp20I TGGCCA 1 cut(s) 434
MspR9I CCNGG 4 cut(s) 157, 312, 387, 436
MvaI CCWGG 4 cut(s) 157, 312, 387, 436
NarI GGCGCC 1 cut(s) 383
NdeII GATC 1 cut(s) 390
NlaIII CATG 1 cut(s) 376
NlaIV GGNNCC 4 cut(s) 191, 192, 384, 399
PciSI GCTCTTC 1 cut(s) 254
PfoI TCCNGGA 1 cut(s) 310
PkrI GCNGC 1 cut(s) 285
PluTI GGCGCC 1 cut(s) 386
PpuMI RGGWCCY 1 cut(s) 190
Psp5II RGGWCCY 1 cut(s) 190
Psp6I CCWGG 4 cut(s) 155, 310, 385, 434
PspFI CCCAGC 1 cut(s) 82
PspGI CCWGG 4 cut(s) 155, 310, 385, 434
PspN4I GGNNCC 4 cut(s) 191, 192, 384, 399
PspPI GGNCC 2 cut(s) 89, 190
PspPPI RGGWCCY 1 cut(s) 190
RsaI GTAC 1 cut(s) 124
RsaNI GTAC 1 cut(s) 123
SapI GCTCTTC 1 cut(s) 254
SatI GCNGC 1 cut(s) 284
Sau3AI GATC 1 cut(s) 390
Sau96I GGNCC 2 cut(s) 89, 190
ScrFI CCNGG 4 cut(s) 157, 312, 387, 436
SduI GDGCHC 3 cut(s) 113, 266, 409
SetI ASST 7 cut(s) 13, 39, 48, 236, 323, 336, 461
SfoI GGCGCC 1 cut(s) 384
SinI GGWCC 1 cut(s) 190
SmlI CTYRAG 1 cut(s) 215
SmoI CTYRAG 1 cut(s) 215
SspDI GGCGCC 1 cut(s) 382
SspMI CTAG 1 cut(s) 402
StyD4I CCNGG 4 cut(s) 155, 310, 385, 434
StyI CCWWGG 2 cut(s) 401, 414
TaaI ACNGT 3 cut(s) 127, 349, 397
TatI WGTACW 1 cut(s) 122
TscAI CASTG 2 cut(s) 75, 259
TseI GCWGC 1 cut(s) 283
TspDTI ATGAA 2 cut(s) 17, 281
TspRI CASTG 2 cut(s) 75, 259
VpaK11BI GGWCC 1 cut(s) 190
XcmI CCANNNNNNNNNTGG 1 cut(s) 99
XmaJI CCTAGG 1 cut(s) 401
XspI CTAG 1 cut(s) 402
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.