Prupe.7G080500_v2.0.a1

beta-glucosidase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0017753
Physical Location & Seq
Reverse (-)
11581755 .. 11588216
6462 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G080500.8_v2.0.a1.CDS.3

Sequence Viewer

Length: 1671 bp
ATGGCTGACACTACAAACACGAGATACAAATGCACCTCTAGGCTGTACATAAACTCCATGCAGGAAGAGCACCAAAAGCCCTCTCCACTTGTAAGACTTGGTTATGTCAATGCAATTACGCTCTTTGCTCTTATGTGTGGTGCTTCTCTTTGGCTTTGCATTGGCAAATACCAAATCCTGCATTGGGAAAAACCCTCTCTACGCATTGATTGCCCAAATCTGAACAGGACCAATTTTGATTCTCTTGTACCAGATTTCATATTTGGCGCTGCTACATCATCTTACCAGGTAGAAGGTGCTGCAAACGAAGATGGTAGAGGACCAAGCATATGGGATTCCTTCACCCACAACCATCCAGAAAAGATCGCAGATCAAAGTAATGGAGATGTCGCTATTGATGAATATCATCGCTATAAGGAGGATGTGGAGATTATAAAGAATATGTCAATGGAAGTGTACAGGTTCTCTATCTCATGGTCCAGAGTGATACCAAACGGAACTGGTCAACCTAACCCGAAAGGAATCGAATACTACAATAATCTCATCAATGAAATCCTAAAGAAAGGTATGAAACCATATGTTACACTCTTTCACTGGGATCTTCCCCAAGCCTTACAGGAGAAATATGGTGGTTTCTTAAGCCCTCTTATTGTCGATGACTATAGAGCATATGTAGAACTTTGTTATAAGGAATTTGGTGATCGAGTACTATATTGGGTGACAGCTAATGAGCCATATACTGTGAGTAACCATGGTTATGCAATTGGGGTCCACGCACCAGGCCGATGCTCTTATTGGTACGACCAAACATGCCTTGGTGGAAATTCGGGTATTGAACCATATTTGGTGACACACCACCAACTCCTTGCTCATGTTGCCGCTGTAAAATTATACAGGGATAAATATCAGGCATTTCAAAAAGGTGTGATAGGAATAACAGTGAATACTTACTGGTTTGTGCCCACTTCTAAGGCAAAGCATGATATAGATGCTGCATTTCGAGCTTTGGATTTTATGTTTGGATGGCAAGTGTTTATGGACCCATTGATAAGTGGTGACTATCCACATAGCATGCGATCTCTTGTTGGAAAACGATTACCAAAATTCACAGATGAAGAATCCAAGTTGCTGAAAGGGTCATATGATTTTATTGGAATAAATTACTATTCTGCAAGATATGCAAGCGCTTACCCTGCGGATTATAAAATACCTACGCCTCCAAGCTACTTGACTGATGCTTATGTTAATGTTACAACTGAGTTTAATGGGGTTCCTATTGGTCCAAAGGCTGCTTCAGACTGGTTATATATTTACCCAAAAGGACTTTACGATGTTATACTCTACACAAAGGAAAAGTATAATAATCCAATTATGTACATTACTGAGAATGGAGTGGATGAGTTCAATAATAACAAAGTACCACTTCAAATAGCCCTTAAGGATCCCGATAGAAGTTACTACTACTATCACCACCTTTGTTACCTCCAAGCAGCAATTAAGGAGGGTGCTAATGTGCAGGGATACTTTGCATGGTCATTTCTAGACAACTTTGAATGGAATTCTGGATACACTGTTCGGTTTGGTATCAACTATGTTGATTATGCCAATGGACTGAAAAGATACCCAAAAGACTCGATGCAGTGGTTCCAAAGTTTCCTCAAGAGATCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00460 ko00500 ko00940 ko01100 ko01110 map00460 map00500 map00940 map01100 map01110
Pfam Domains
Protein Families
Glyco_hydro_1

Protein Analysis

557

Amino Acids

64.07

Weight (kDa)

6.44

Isoelectric Point (pI)

28.16

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 434, 687, 1203
AciI CCGC 2 cut(s) 879, 1196
AclWI GGATC 3 cut(s) 606, 1436, 1449
AcsI RAATTY 4 cut(s) 692, 823, 1103, 1558
AcuI CTGAAG 1 cut(s) 1278
AfaI GTAC 7 cut(s) 47, 249, 458, 708, 800, 1376, 1419
AfeI AGCGCT 1 cut(s) 1186
AfiI CCNNNNNNNGG 1 cut(s) 184
AflII CTTAAG 2 cut(s) 637, 1436
AgsI TTSAA 5 cut(s) 836, 917, 1405, 1427, 1553
AjnI CCWGG 2 cut(s) 285, 778
AjuI GAANNNNNNNTTGG 2 cut(s) 1276, 1308
AloI GAACNNNNNNTCC 2 cut(s) 1557, 1589
AluBI AGCT 3 cut(s) 725, 1004, 1224
AluI AGCT 3 cut(s) 725, 1004, 1224
Alw21I GWGCWC 1 cut(s) 72
AlwI GGATC 3 cut(s) 606, 1436, 1449
Aor51HI AGCGCT 1 cut(s) 1186
AoxI GGCC 1 cut(s) 781
ApeKI GCWGC 5 cut(s) 269, 299, 992, 1289, 1490
ApoI RAATTY 4 cut(s) 692, 823, 1103, 1558
AspLEI GCGC 2 cut(s) 269, 1187
AspS9I GGNCC 6 cut(s) 228, 320, 477, 769, 1039, 1280
AsuHPI GGTGA 6 cut(s) 334, 710, 730, 859, 1067, 1460
AvaII GGWCC 6 cut(s) 228, 320, 477, 769, 1039, 1280
BaeGI GKGCMC 1 cut(s) 963
BamHI GGATCC 1 cut(s) 1441
BauI CACGAG 1 cut(s) 19
Bbv12I GWGCWC 1 cut(s) 72
BbvI GCAGC 5 cut(s) 256, 286, 979, 1276, 1502
BccI CCATC 3 cut(s) 305, 360, 1017
BciT130I CCWGG 2 cut(s) 287, 780
BciVI GTATCC 2 cut(s) 1514, 1559
BfaI CTAG 2 cut(s) 39, 1541
BfmI CTRYAG 1 cut(s) 661
BfoI RGCGCY 2 cut(s) 270, 1188
BfrI CTTAAG 2 cut(s) 637, 1436
BfuI GTATCC 2 cut(s) 1514, 1559
BisI GCNGC 6 cut(s) 270, 300, 879, 993, 1290, 1491
BlsI GCNGC 6 cut(s) 271, 301, 880, 994, 1291, 1492
BmcAI AGTACT 1 cut(s) 708
Bme1390I CCNGG 2 cut(s) 287, 780
Bme18I GGWCC 6 cut(s) 228, 320, 477, 769, 1039, 1280
BmgT120I GGNCC 6 cut(s) 228, 320, 477, 769, 1039, 1280
BmiI GGNNCC 5 cut(s) 770, 1041, 1272, 1443, 1646
BmrFI CCNGG 2 cut(s) 287, 780
BmrI ACTGGG 1 cut(s) 604
BmsI GCATC 4 cut(s) 776, 979, 1225, 1626
BmuI ACTGGG 1 cut(s) 604
BpuEI CTTGAG 1 cut(s) 1643
BsaBI GATNNNNATC 2 cut(s) 402, 903
BsaJI CCNNGG 2 cut(s) 751, 814
BsaXI ACNNNNNCTCC 2 cut(s) 38, 68
Bsc4I CCNNNNNNNGG 1 cut(s) 184
Bse1I ACTGG 4 cut(s) 505, 599, 956, 1304
Bse8I GATNNNNATC 2 cut(s) 402, 903
BseBI CCWGG 2 cut(s) 287, 780
BseDI CCNNGG 2 cut(s) 751, 814
BseGI GGATG 4 cut(s) 352, 427, 1028, 1402
BseJI GATNNNNATC 2 cut(s) 402, 903
BseLI CCNNNNNNNGG 1 cut(s) 184
BseMII CTCAG 2 cut(s) 1248, 1374
BseNI ACTGG 4 cut(s) 505, 599, 956, 1304
BseSI GKGCMC 1 cut(s) 963
BseXI GCAGC 5 cut(s) 256, 286, 979, 1276, 1502
BsgI GTGCAG 1 cut(s) 1535
BshFI GGCC 1 cut(s) 783
BsiHKAI GWGCWC 1 cut(s) 72
BslI CCNNNNNNNGG 1 cut(s) 184
BsnI GGCC 1 cut(s) 783
Bsp1286I GDGCHC 2 cut(s) 72, 963
Bsp1407I TGTACA 3 cut(s) 45, 456, 1374
Bsp143I GATC 7 cut(s) 363, 370, 598, 700, 1076, 1441, 1664
Bsp19I CCATGG 1 cut(s) 751
BspACI CCGC 2 cut(s) 879, 1196
BspANI GGCC 1 cut(s) 783
BspCNI CTCAG 2 cut(s) 1249, 1375
BspLI GGNNCC 5 cut(s) 770, 1041, 1272, 1443, 1646
BspPI GGATC 3 cut(s) 606, 1436, 1449
BspQI GCTCTTC 1 cut(s) 60
BspTI CTTAAG 2 cut(s) 637, 1436
BsrGI TGTACA 3 cut(s) 45, 456, 1374
BsrI ACTGG 4 cut(s) 505, 599, 956, 1304
BssECI CCNNGG 2 cut(s) 751, 814
BssMI GATC 7 cut(s) 363, 370, 598, 700, 1076, 1441, 1664
BssSI CACGAG 1 cut(s) 19
BssT1I CCWWGG 2 cut(s) 751, 814
Bst2BI CACGAG 1 cut(s) 19
Bst2UI CCWGG 2 cut(s) 287, 780
Bst4CI ACNGT 3 cut(s) 742, 940, 1573
Bst6I CTCTTC 1 cut(s) 60
BstAFI CTTAAG 2 cut(s) 637, 1436
BstAPI GCANNNNNTGC 2 cut(s) 210, 1178
BstAUI TGTACA 3 cut(s) 45, 456, 1374
BstC8I GCNNGC 2 cut(s) 1073, 1183
BstDEI CTNAG 3 cut(s) 969, 1257, 1383
BstDSI CCRYGG 1 cut(s) 751
BstF5I GGATG 4 cut(s) 352, 427, 1028, 1402
BstH2I RGCGCY 2 cut(s) 270, 1188
BstHHI GCGC 2 cut(s) 269, 1187
BstKTI GATC 7 cut(s) 366, 373, 601, 703, 1079, 1444, 1667
BstMBI GATC 7 cut(s) 363, 370, 598, 700, 1076, 1441, 1664
BstMWI GCNNNNNNNGC 7 cut(s) 67, 76, 210, 875, 1001, 1178, 1193
BstNI CCWGG 2 cut(s) 287, 780
BstNSI RCATGY 2 cut(s) 813, 1075
BstSCI CCNGG 2 cut(s) 285, 778
BstSFI CTRYAG 1 cut(s) 661
BstSLI GKGCMC 1 cut(s) 963
BstV1I GCAGC 5 cut(s) 256, 286, 979, 1276, 1502
BstX2I RGATCY 2 cut(s) 598, 1441
BstXI CCANNNNNNTGG 1 cut(s) 330
BstYI RGATCY 2 cut(s) 598, 1441
BsuI GTATCC 2 cut(s) 1514, 1559
BsuRI GGCC 1 cut(s) 783
BtgI CCRYGG 1 cut(s) 751
BtgZI GCGATG 1 cut(s) 392
BtsCI GGATG 4 cut(s) 352, 427, 1028, 1402
BtsI GCAGTG 1 cut(s) 1646
BtsIMutI CAGTG 4 cut(s) 592, 945, 1569, 1646
Cac8I GCNNGC 2 cut(s) 1073, 1183
CfoI GCGC 2 cut(s) 269, 1187
Cfr13I GGNCC 6 cut(s) 228, 320, 477, 769, 1039, 1280
CsiI ACCWGGT 1 cut(s) 285
Csp6I GTAC 7 cut(s) 46, 248, 457, 707, 799, 1375, 1418
CviAII CATG 8 cut(s) 58, 474, 752, 810, 872, 980, 1072, 1530
CviQI GTAC 7 cut(s) 46, 248, 457, 707, 799, 1375, 1418
DdeI CTNAG 3 cut(s) 969, 1257, 1383
DpnI GATC 7 cut(s) 365, 372, 600, 702, 1078, 1443, 1666
DpnII GATC 7 cut(s) 363, 370, 598, 700, 1076, 1441, 1664
Eam1104I CTCTTC 1 cut(s) 60
EarI CTCTTC 1 cut(s) 60
Eco130I CCWWGG 2 cut(s) 751, 814
Eco47I GGWCC 6 cut(s) 228, 320, 477, 769, 1039, 1280
Eco47III AGCGCT 1 cut(s) 1186
Eco57I CTGAAG 1 cut(s) 1278
EcoRI GAATTC 1 cut(s) 1558
EcoRII CCWGG 2 cut(s) 285, 778
EcoT14I CCWWGG 2 cut(s) 751, 814
ErhI CCWWGG 2 cut(s) 751, 814
FaeI CATG 8 cut(s) 61, 477, 755, 813, 875, 983, 1075, 1533
FalI AAGNNNNNCTT 2 cut(s) 1407, 1439
FatI CATG 8 cut(s) 57, 473, 751, 809, 871, 979, 1071, 1529
FauNDI CATATG 4 cut(s) 329, 577, 670, 1141
Fnu4HI GCNGC 6 cut(s) 270, 300, 879, 993, 1290, 1491
FokI GGATG 4 cut(s) 339, 434, 1035, 1409
Fsp4HI GCNGC 6 cut(s) 270, 300, 879, 993, 1290, 1491
FspBI CTAG 2 cut(s) 39, 1541
GlaI GCGC 2 cut(s) 268, 1186
GluI GCNGC 6 cut(s) 270, 300, 879, 993, 1290, 1491
HaeII RGCGCY 2 cut(s) 270, 1188
HaeIII GGCC 1 cut(s) 783
HhaI GCGC 2 cut(s) 269, 1187
Hin1II CATG 8 cut(s) 61, 477, 755, 813, 875, 983, 1075, 1533
Hin6I GCGC 2 cut(s) 267, 1185
HinP1I GCGC 2 cut(s) 267, 1185
HincII GTYRAC 1 cut(s) 506
HindII GTYRAC 1 cut(s) 506
HinfI GANTC 5 cut(s) 239, 335, 522, 1118, 1631
HphI GGTGA 6 cut(s) 334, 710, 730, 859, 1067, 1460
Hpy166II GTNNAC 3 cut(s) 457, 506, 772
Hpy188I TCNGA 2 cut(s) 222, 1297
Hpy188III TCNNGA 6 cut(s) 356, 480, 1445, 1541, 1563, 1660
Hpy8I GTNNAC 3 cut(s) 457, 506, 772
HpyAV CCTTC 2 cut(s) 287, 349
HpyCH4III ACNGT 3 cut(s) 742, 940, 1573
HpyF10VI GCNNNNNNNGC 7 cut(s) 67, 76, 210, 875, 1001, 1178, 1193
HpyF3I CTNAG 3 cut(s) 969, 1257, 1383
Hsp92II CATG 8 cut(s) 61, 477, 755, 813, 875, 983, 1075, 1533
HspAI GCGC 2 cut(s) 267, 1185
Kzo9I GATC 7 cut(s) 363, 370, 598, 700, 1076, 1441, 1664
LguI GCTCTTC 1 cut(s) 60
Lsp1109I GCAGC 5 cut(s) 256, 286, 979, 1276, 1502
LweI GCATC 4 cut(s) 776, 979, 1225, 1626
MabI ACCWGGT 1 cut(s) 285
MaeI CTAG 2 cut(s) 39, 1541
MaeIII GTNAC 8 cut(s) 580, 718, 746, 847, 1055, 1249, 1454, 1478
MalI GATC 7 cut(s) 365, 372, 600, 702, 1078, 1443, 1666
MboI GATC 7 cut(s) 363, 370, 598, 700, 1076, 1441, 1664
MboII GAAGA 4 cut(s) 77, 320, 593, 1127
MfeI CAATTG 1 cut(s) 762
MflI RGATCY 2 cut(s) 598, 1441
MhlI GDGCHC 2 cut(s) 72, 963
MlyI GAGTC 1 cut(s) 1625
MmeI TCCRAC 1 cut(s) 1066
MseI TTAA 5 cut(s) 638, 1245, 1263, 1437, 1497
MslI CAYNNNNRTG 1 cut(s) 756
MspA1I CMGCKG 1 cut(s) 881
MspCI CTTAAG 2 cut(s) 637, 1436
MspR9I CCNGG 2 cut(s) 287, 780
MunI CAATTG 1 cut(s) 762
MvaI CCWGG 2 cut(s) 287, 780
MwoI GCNNNNNNNGC 7 cut(s) 67, 76, 210, 875, 1001, 1178, 1193
NcoI CCATGG 1 cut(s) 751
NdeI CATATG 4 cut(s) 329, 577, 670, 1141
NdeII GATC 7 cut(s) 363, 370, 598, 700, 1076, 1441, 1664
NlaIII CATG 8 cut(s) 61, 477, 755, 813, 875, 983, 1075, 1533
NlaIV GGNNCC 5 cut(s) 770, 1041, 1272, 1443, 1646
NmuCI GTSAC 3 cut(s) 718, 847, 1055
NspI RCATGY 2 cut(s) 813, 1075
PaeI GCATGC 1 cut(s) 1075
PciSI GCTCTTC 1 cut(s) 60
PfeI GAWTC 4 cut(s) 239, 335, 522, 1118
PkrI GCNGC 6 cut(s) 271, 301, 880, 994, 1291, 1492
PleI GAGTC 1 cut(s) 1625
PpsI GAGTC 1 cut(s) 1625
PsiI TTATAA 3 cut(s) 434, 687, 1203
Psp6I CCWGG 2 cut(s) 285, 778
PspGI CCWGG 2 cut(s) 285, 778
PspN4I GGNNCC 5 cut(s) 770, 1041, 1272, 1443, 1646
PspPI GGNCC 6 cut(s) 228, 320, 477, 769, 1039, 1280
PsuI RGATCY 2 cut(s) 598, 1441
RsaI GTAC 7 cut(s) 47, 249, 458, 708, 800, 1376, 1419
RsaNI GTAC 7 cut(s) 46, 248, 457, 707, 799, 1375, 1418
RseI CAYNNNNRTG 1 cut(s) 756
SapI GCTCTTC 1 cut(s) 60
SaqAI TTAA 5 cut(s) 638, 1245, 1263, 1437, 1497
SatI GCNGC 6 cut(s) 270, 300, 879, 993, 1290, 1491
Sau3AI GATC 7 cut(s) 363, 370, 598, 700, 1076, 1441, 1664
Sau96I GGNCC 6 cut(s) 228, 320, 477, 769, 1039, 1280
ScaI AGTACT 1 cut(s) 708
SchI GAGTC 1 cut(s) 1625
ScrFI CCNGG 2 cut(s) 287, 780
SduI GDGCHC 2 cut(s) 72, 963
SexAI ACCWGGT 1 cut(s) 285
SfaNI GCATC 4 cut(s) 776, 979, 1225, 1626
SfcI CTRYAG 1 cut(s) 661
SinI GGWCC 6 cut(s) 228, 320, 477, 769, 1039, 1280
SmiMI CAYNNNNRTG 1 cut(s) 756
SmlI CTYRAG 3 cut(s) 637, 1436, 1658
SmoI CTYRAG 3 cut(s) 637, 1436, 1658
SphI GCATGC 1 cut(s) 1075
SsiI CCGC 2 cut(s) 879, 1196
SspMI CTAG 2 cut(s) 39, 1541
StyD4I CCNGG 2 cut(s) 285, 778
StyI CCWWGG 2 cut(s) 751, 814
TaaI ACNGT 3 cut(s) 742, 940, 1573
TaqI TCGA 5 cut(s) 525, 654, 703, 1000, 1634
TatI WGTACW 4 cut(s) 45, 456, 706, 1374
TauI GCSGC 1 cut(s) 881
TfiI GAWTC 4 cut(s) 239, 335, 522, 1118
Tru1I TTAA 5 cut(s) 638, 1245, 1263, 1437, 1497
Tru9I TTAA 5 cut(s) 638, 1245, 1263, 1437, 1497
TscAI CASTG 4 cut(s) 599, 945, 1576, 1646
TseFI GTSAC 3 cut(s) 718, 847, 1055
TseI GCWGC 5 cut(s) 269, 299, 992, 1289, 1490
Tsp45I GTSAC 3 cut(s) 718, 847, 1055
TspDTI ATGAA 5 cut(s) 247, 414, 564, 584, 1128
TspGWI ACGGA 1 cut(s) 510
TspRI CASTG 4 cut(s) 599, 945, 1576, 1646
Vha464I CTTAAG 2 cut(s) 637, 1436
VpaK11BI GGWCC 6 cut(s) 228, 320, 477, 769, 1039, 1280
XapI RAATTY 4 cut(s) 692, 823, 1103, 1558
XbaI TCTAGA 1 cut(s) 1540
XceI RCATGY 2 cut(s) 813, 1075
XcmI CCANNNNNNNNNTGG 1 cut(s) 812
XspI CTAG 2 cut(s) 39, 1541
ZrmI AGTACT 1 cut(s) 708
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.