Prupe.7G087800_v2.0.a1

agmatinase activity

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
N/A
Physical Location & Seq
Forward (+)
12182591 .. 12183535
945 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G087800.1_v2.0.a1.CDS.1

Sequence Viewer

Length: 339 bp
ATGGATTGTTCTTCTCAGTCACAACCAACACTGTTTGTTTTAACAAAATCTTCAATGGTTGGTATGAGATCAATCAACAAAGAAGGTCGTGAACAAGGAAAAAGAGTACTGAGAGTAACTCTTAAGAAATTTGTGTTTGACAGAAGGATTGCCTTGATCCTGCATTTGCTGTCACACATTGAGCCTTGGGGTCTTTCCTTCCGTGATGTTCTCAACATACTCCACAGCCTCCAAGGCGACATTGTTGCTGCAGATGTCGTTGAATTCAACCCGCATGGGATGACTGCAATGGTAGCAGCTAAGCTGGTAAGAGAGTTGACTGCAAAGATATCAAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

113

Amino Acids

12.57

Weight (kDa)

10.0

Isoelectric Point (pI)

50.84

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 272
AclWI GGATC 1 cut(s) 151
AcsI RAATTY 2 cut(s) 128, 263
AfaI GTAC 1 cut(s) 108
AflII CTTAAG 1 cut(s) 122
AgsI TTSAA 3 cut(s) 54, 263, 268
AluBI AGCT 2 cut(s) 299, 304
AluI AGCT 2 cut(s) 299, 304
AlwI GGATC 1 cut(s) 151
ApeKI GCWGC 2 cut(s) 248, 296
ApoI RAATTY 2 cut(s) 128, 263
BbvI GCAGC 2 cut(s) 235, 308
BcgI CGANNNNNNTGC 2 cut(s) 227, 261
BfmI CTRYAG 1 cut(s) 249
BfrI CTTAAG 1 cut(s) 122
BglI GCCNNNNNGGC 1 cut(s) 234
BisI GCNGC 2 cut(s) 249, 297
BlpI GCTNAGC 1 cut(s) 300
BlsI GCNGC 2 cut(s) 250, 298
BmcAI AGTACT 1 cut(s) 108
BplI GAGNNNNNCTC 2 cut(s) 103, 135
Bpu1102I GCTNAGC 1 cut(s) 300
BsaJI CCNNGG 2 cut(s) 185, 232
Bse3DI GCAATG 1 cut(s) 294
BseDI CCNNGG 2 cut(s) 185, 232
BseGI GGATG 1 cut(s) 285
BseMI GCAATG 1 cut(s) 294
BseMII CTCAG 2 cut(s) 29, 101
BseXI GCAGC 2 cut(s) 235, 308
Bsp143I GATC 2 cut(s) 68, 156
Bsp1720I GCTNAGC 1 cut(s) 300
BspACI CCGC 1 cut(s) 272
BspCNI CTCAG 2 cut(s) 28, 102
BspMAI CTGCAG 1 cut(s) 253
BspPI GGATC 1 cut(s) 151
BspTI CTTAAG 1 cut(s) 122
BsrDI GCAATG 1 cut(s) 294
BssECI CCNNGG 2 cut(s) 185, 232
BssMI GATC 2 cut(s) 68, 156
BssT1I CCWWGG 2 cut(s) 185, 232
Bst4CI ACNGT 1 cut(s) 33
BstAFI CTTAAG 1 cut(s) 122
BstDEI CTNAG 3 cut(s) 15, 110, 300
BstF5I GGATG 1 cut(s) 285
BstKTI GATC 2 cut(s) 71, 159
BstMBI GATC 2 cut(s) 68, 156
BstMWI GCNNNNNNNGC 2 cut(s) 234, 293
BstSFI CTRYAG 1 cut(s) 249
BstV1I GCAGC 2 cut(s) 235, 308
BtsCI GGATG 1 cut(s) 285
BtsIMutI CAGTG 1 cut(s) 29
Csp6I GTAC 1 cut(s) 107
CviAII CATG 1 cut(s) 275
CviJI RGCY 4 cut(s) 184, 228, 299, 304
CviKI_1 RGCY 4 cut(s) 184, 228, 299, 304
CviQI GTAC 1 cut(s) 107
DdeI CTNAG 3 cut(s) 15, 110, 300
DpnI GATC 2 cut(s) 70, 158
DpnII GATC 2 cut(s) 68, 156
Eco130I CCWWGG 2 cut(s) 185, 232
Eco32I GATATC 1 cut(s) 330
EcoRI GAATTC 1 cut(s) 263
EcoRV GATATC 1 cut(s) 330
EcoT14I CCWWGG 2 cut(s) 185, 232
ErhI CCWWGG 2 cut(s) 185, 232
FaeI CATG 1 cut(s) 278
FaiI YATR 3 cut(s) 65, 218, 276
FatI CATG 1 cut(s) 274
FauI CCCGC 1 cut(s) 279
Fnu4HI GCNGC 2 cut(s) 249, 297
FokI GGATG 1 cut(s) 292
Fsp4HI GCNGC 2 cut(s) 249, 297
GluI GCNGC 2 cut(s) 249, 297
Hin1II CATG 1 cut(s) 278
HincII GTYRAC 1 cut(s) 318
HindII GTYRAC 1 cut(s) 318
Hpy166II GTNNAC 2 cut(s) 92, 318
Hpy188III TCNNGA 1 cut(s) 89
Hpy8I GTNNAC 2 cut(s) 92, 318
HpyAV CCTTC 3 cut(s) 77, 138, 208
HpyCH4III ACNGT 1 cut(s) 33
HpyCH4V TGCA 4 cut(s) 163, 251, 287, 323
HpyF10VI GCNNNNNNNGC 2 cut(s) 234, 293
HpyF3I CTNAG 3 cut(s) 15, 110, 300
Hsp92II CATG 1 cut(s) 278
Kzo9I GATC 2 cut(s) 68, 156
LpnPI CCDG 2 cut(s) 173, 290
Lsp1109I GCAGC 2 cut(s) 235, 308
MaeIII GTNAC 3 cut(s) 18, 115, 171
MalI GATC 2 cut(s) 70, 158
MboI GATC 2 cut(s) 68, 156
MboII GAAGA 2 cut(s) 3, 42
MluCI AATT 2 cut(s) 128, 263
MnlI CCTC 1 cut(s) 239
MseI TTAA 2 cut(s) 41, 123
MspCI CTTAAG 1 cut(s) 122
MwoI GCNNNNNNNGC 2 cut(s) 234, 293
NdeII GATC 2 cut(s) 68, 156
NlaIII CATG 1 cut(s) 278
NmuCI GTSAC 2 cut(s) 18, 171
PkrI GCNGC 2 cut(s) 250, 298
PstI CTGCAG 1 cut(s) 253
RsaI GTAC 1 cut(s) 108
RsaNI GTAC 1 cut(s) 107
SaqAI TTAA 2 cut(s) 41, 123
SatI GCNGC 2 cut(s) 249, 297
Sau3AI GATC 2 cut(s) 68, 156
ScaI AGTACT 1 cut(s) 108
SetI ASST 3 cut(s) 88, 301, 306
SfcI CTRYAG 1 cut(s) 249
SmlI CTYRAG 1 cut(s) 122
SmoI CTYRAG 1 cut(s) 122
Sse9I AATT 2 cut(s) 128, 263
SsiI CCGC 1 cut(s) 272
StyI CCWWGG 2 cut(s) 185, 232
TaaI ACNGT 1 cut(s) 33
TasI AATT 2 cut(s) 128, 263
TatI WGTACW 1 cut(s) 106
Tru1I TTAA 2 cut(s) 41, 123
Tru9I TTAA 2 cut(s) 41, 123
TscAI CASTG 1 cut(s) 36
TseFI GTSAC 2 cut(s) 18, 171
TseI GCWGC 2 cut(s) 248, 296
Tsp45I GTSAC 2 cut(s) 18, 171
TspGWI ACGGA 1 cut(s) 191
TspRI CASTG 1 cut(s) 36
Vha464I CTTAAG 1 cut(s) 122
XapI RAATTY 2 cut(s) 128, 263
ZrmI AGTACT 1 cut(s) 108
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.