Prupe.7G118800_v2.0.a1

WAT1-related protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
N/A
Physical Location & Seq
Reverse (-)
14315067 .. 14316814
1748 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G118800.1_v2.0.a1.CDS.3

Sequence Viewer

Length: 519 bp
ATGAAGTCGAAGATGAAATCAGTGATGGTAATGGTGGTGGTGGTGCAGATTTTATATAGTGGGATGAATGGATTATGTAAACTAGTGGCTCAAGAGGGAATGAATCTCACCATTCTTGTTGCCTACCGGCTGATTTTTGCTCCTTCTGCTATGATTTCACCCGCCCTTATATTTGAAAGGGACAACACAACAAAACTAACACGGATGGTATTGTTTCAAGCTTTTCTCTGCGGGCTATTTGGGATGGAGAAGTTTTCTATACGAACTAATGCAGGGAAAACTAAAATTCTGGGAATGGTTATGGGGTTAGGAGGGGCTATGCTCTTCAGCTTCTACAAGGGCATAGAGATTAACATATGGTCTACAAATGTCAATCTTCTCCATAATCATGGCCAACAAAACAAGGCATCACACAAAAGTTTTGGGAGTATTTTGTCCGGCTTCATGCTATTTTTGGGTCGCTGTGTGTCCTATGCTTTGTGGTTGATAATTCAAGTTACTTTTCTTTATTTCCTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

173

Amino Acids

19.23

Weight (kDa)

9.92

Isoelectric Point (pI)

32.1

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 362
AciI CCGC 2 cut(s) 162, 231
AcoI YGGCCR 1 cut(s) 391
AcsI RAATTY 1 cut(s) 285
AcuI CTGAAG 1 cut(s) 310
AgsI TTSAA 3 cut(s) 176, 218, 494
AhlI ACTAGT 1 cut(s) 82
AluBI AGCT 2 cut(s) 221, 330
AluI AGCT 2 cut(s) 221, 330
AoxI GGCC 1 cut(s) 391
ApoI RAATTY 1 cut(s) 285
AsuHPI GGTGA 2 cut(s) 100, 150
BalI TGGCCA 1 cut(s) 393
BccI CCATC 3 cut(s) 19, 199, 238
BcuI ACTAGT 1 cut(s) 82
BfaI CTAG 1 cut(s) 83
BmsI GCATC 1 cut(s) 416
BpuEI CTTGAG 1 cut(s) 75
Bse118I RCCGGY 1 cut(s) 126
BseGI GGATG 3 cut(s) 69, 210, 249
BsgI GTGCAG 1 cut(s) 65
BshFI GGCC 1 cut(s) 393
BsiSI CCGG 2 cut(s) 127, 438
BslFI GGGAC 1 cut(s) 194
BsmFI GGGAC 1 cut(s) 194
BsnI GGCC 1 cut(s) 393
BspACI CCGC 2 cut(s) 162, 231
BspANI GGCC 1 cut(s) 393
BspQI GCTCTTC 1 cut(s) 329
BsrFI RCCGGY 1 cut(s) 126
BssAI RCCGGY 1 cut(s) 126
Bst6I CTCTTC 1 cut(s) 329
BstC8I GCNNGC 1 cut(s) 233
BstF5I GGATG 3 cut(s) 69, 210, 249
BstMWI GCNNNNNNNGC 1 cut(s) 146
BstXI CCANNNNNNTGG 1 cut(s) 389
BsuRI GGCC 1 cut(s) 393
BtsCI GGATG 3 cut(s) 69, 210, 249
BtsIMutI CAGTG 1 cut(s) 27
Cac8I GCNNGC 1 cut(s) 233
Cfr10I RCCGGY 1 cut(s) 126
CviAII CATG 2 cut(s) 389, 445
CviJI RGCY 8 cut(s) 89, 130, 221, 235, 317, 330, 393, 441
CviKI_1 RGCY 8 cut(s) 89, 130, 221, 235, 317, 330, 393, 441
EaeI YGGCCR 1 cut(s) 391
Eam1104I CTCTTC 1 cut(s) 329
EarI CTCTTC 1 cut(s) 329
Eco57I CTGAAG 1 cut(s) 310
FaeI CATG 2 cut(s) 392, 448
FaqI GGGAC 1 cut(s) 194
FatI CATG 2 cut(s) 388, 444
FauI CCCGC 2 cut(s) 169, 224
FauNDI CATATG 1 cut(s) 356
FblI GTMKAC 1 cut(s) 362
FokI GGATG 3 cut(s) 76, 217, 256
FspBI CTAG 1 cut(s) 83
HaeIII GGCC 1 cut(s) 393
HapII CCGG 2 cut(s) 127, 438
Hin1II CATG 2 cut(s) 392, 448
HindIII AAGCTT 1 cut(s) 219
HinfI GANTC 1 cut(s) 103
HpaII CCGG 2 cut(s) 127, 438
HphI GGTGA 2 cut(s) 100, 150
Hpy166II GTNNAC 2 cut(s) 80, 363
Hpy188III TCNNGA 1 cut(s) 92
Hpy8I GTNNAC 2 cut(s) 80, 363
HpyAV CCTTC 1 cut(s) 153
HpyCH4V TGCA 2 cut(s) 46, 272
HpyF10VI GCNNNNNNNGC 1 cut(s) 146
Hsp92II CATG 2 cut(s) 392, 448
LguI GCTCTTC 1 cut(s) 329
LmnI GCTCC 1 cut(s) 145
LpnPI CCDG 4 cut(s) 140, 258, 275, 451
LweI GCATC 1 cut(s) 416
MaeI CTAG 1 cut(s) 83
MaeIII GTNAC 1 cut(s) 496
MboII GAAGA 3 cut(s) 22, 316, 368
MlsI TGGCCA 1 cut(s) 393
MluCI AATT 2 cut(s) 285, 489
MluNI TGGCCA 1 cut(s) 393
MnlI CCTC 2 cut(s) 88, 305
Mox20I TGGCCA 1 cut(s) 393
MscI TGGCCA 1 cut(s) 393
MseI TTAA 2 cut(s) 351, 517
MslI CAYNNNNRTG 1 cut(s) 387
Msp20I TGGCCA 1 cut(s) 393
MspI CCGG 2 cut(s) 127, 438
MwoI GCNNNNNNNGC 1 cut(s) 146
NdeI CATATG 1 cut(s) 356
NlaIII CATG 2 cut(s) 392, 448
PciSI GCTCTTC 1 cut(s) 329
PfeI GAWTC 1 cut(s) 103
RseI CAYNNNNRTG 1 cut(s) 387
SapI GCTCTTC 1 cut(s) 329
SaqAI TTAA 2 cut(s) 351, 517
SetI ASST 2 cut(s) 223, 332
SfaNI GCATC 1 cut(s) 416
SmiMI CAYNNNNRTG 1 cut(s) 387
SmlI CTYRAG 1 cut(s) 90
SmoI CTYRAG 1 cut(s) 90
SpeI ACTAGT 1 cut(s) 82
Sse9I AATT 2 cut(s) 285, 489
SsiI CCGC 2 cut(s) 162, 231
SspMI CTAG 1 cut(s) 83
TaqI TCGA 1 cut(s) 8
TasI AATT 2 cut(s) 285, 489
TfiI GAWTC 1 cut(s) 103
Tru1I TTAA 2 cut(s) 351, 517
Tru9I TTAA 2 cut(s) 351, 517
TscAI CASTG 1 cut(s) 27
TspDTI ATGAA 5 cut(s) 17, 29, 80, 116, 433
TspGWI ACGGA 1 cut(s) 217
TspRI CASTG 1 cut(s) 27
XapI RAATTY 1 cut(s) 285
XmiI GTMKAC 1 cut(s) 362
XspI CTAG 1 cut(s) 83
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.