Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

N/A

Physical Location & Seq

Genomic Coordinates Reverse (-)

15470016 .. 15473532

Gene Structure 3517 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G138300.1_v2.0.a1.CDS.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 654 bp

ATGGTTAATCCAACGGTGGAATTTTTTGGAGGGATCGGCCTTGGAGCACTGGTAGGACCGGGGGGTAATTTACTCTGGGGAACGGTAGGGAAGGGTTTCAACTTTGAAACCTGGCGCACAAACCTCGACTCCATGATAAATTCTTTACTGCCATTGATCAAAGAGATGGAAGACCAGAATAAGACGTTGGTTATCGGAGATGACGAAATAGAAGATCTCAAGCAAAAACTGACAGAGGGTGAAGATCTCGTTGAGGAGTTAAAGAAGGTCAGTTCATGGAGCTTGATGACGCCTCTTCACACGAACCGGCTTGCTGAACTGGACAAGTCTATTAGAAGACTGTTAGAGGTACTGAAGGTGCAGGGAATAAGGGATGTCAAGGGGATTTCCCTGTTGGCAAAGGATCACACCAAACAACTTAAGGCCTGCAAAACAGATGTGGAGGGAACCTTGGTTTTGGCGAAGGATCAGACTGAACAACTTAAGGCCTGCAGAAGGGATGTCGAGGAGACTTTGGTTTTGGCAAGGGATCACTCTGATCAACTTACCGACTGCAAAAGCCATGTCGAGGATACTTTGGGTTTGGCAAGGAAGATAGACGCCAAGCTCGACAAATTTGAACGGATTGGTCTGGTACAAGGTGACGAAGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009909 GO:0009910 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0048519 GO:0048580 GO:0048581 GO:0048831 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051093 GO:0051239 GO:0051241 GO:0051716 GO:0060089 GO:0060860 GO:0060862 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564 GO:2000026 GO:2000241 GO:2000242

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr

Protein Analysis

218

Amino Acids

24.16

Weight (kDa)

5.16

Isoelectric Point (pI)

24.41

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AclWI	GGATC	4 cut(s)	41, 411, 474, 537
AcsI	RAATTY	3 cut(s)	20, 139, 614
AcuI	CTGAAG	1 cut(s)	374
AcyI	GRCGYC	2 cut(s)	290, 600
AfaI	GTAC	2 cut(s)	351, 636
AfiI	CCNNNNNNNGG	2 cut(s)	495, 568
AflII	CTTAAG	2 cut(s)	419, 482
AgsI	TTSAA	3 cut(s)	100, 107, 620
AjnI	CCWGG	1 cut(s)	110
AjuI	GAANNNNNNNTTGG	2 cut(s)	170, 202
AluBI	AGCT	3 cut(s)	282, 607, 650
AluI	AGCT	3 cut(s)	282, 607, 650
Alw21I	GWGCWC	1 cut(s)	49
Alw26I	GTCTC	1 cut(s)	503
AlwI	GGATC	4 cut(s)	41, 411, 474, 537
AoxI	GGCC	3 cut(s)	37, 423, 486
ApoI	RAATTY	3 cut(s)	20, 139, 614
ArsI	GACNNNNNNTTYG	4 cut(s)	502, 534, 549, 581
Asp700I	GAANNNNTTC	1 cut(s)	95
AspLEI	GCGC	1 cut(s)	117
AspS9I	GGNCC	1 cut(s)	56
AsuC2I	CCSGG	1 cut(s)	60
AsuHPI	GGTGA	2 cut(s)	251, 653
AvaII	GGWCC	1 cut(s)	56
BbsI	GAAGAC	2 cut(s)	177, 343
Bbv12I	GWGCWC	1 cut(s)	49
BccI	CCATC	1 cut(s)	160
BcgI	CGANNNNNNTGC	2 cut(s)	106, 140
BciT130I	CCWGG	1 cut(s)	112
BciVI	GTATCC	1 cut(s)	565
BclI	TGATCA	2 cut(s)	156, 538
BcnI	CCSGG	1 cut(s)	60
BcoDI	GTCTC	1 cut(s)	503
BfmI	CTRYAG	1 cut(s)	490
BfrI	CTTAAG	2 cut(s)	419, 482
BfuI	GTATCC	1 cut(s)	565
BglII	AGATCT	2 cut(s)	214, 244
Bme1390I	CCNGG	2 cut(s)	60, 112
Bme18I	GGWCC	1 cut(s)	56
BmgT120I	GGNCC	1 cut(s)	56
BmiI	GGNNCC	1 cut(s)	448
BmrFI	CCNGG	2 cut(s)	60, 112
BpiI	GAAGAC	2 cut(s)	177, 343
BpuEI	CTTGAG	1 cut(s)	203
BpuMI	CCSGG	1 cut(s)	60
BsaHI	GRCGYC	2 cut(s)	290, 600
BsaJI	CCNNGG	3 cut(s)	40, 59, 450
BsaXI	ACNNNNNCTCC	4 cut(s)	36, 66, 113, 143
Bsc4I	CCNNNNNNNGG	2 cut(s)	495, 568
Bse118I	RCCGGY	1 cut(s)	306
Bse1I	ACTGG	2 cut(s)	54, 324
BseBI	CCWGG	1 cut(s)	112
BseDI	CCNNGG	3 cut(s)	40, 59, 450
BseGI	GGATG	2 cut(s)	379, 505
BseLI	CCNNNNNNNGG	2 cut(s)	495, 568
BseNI	ACTGG	2 cut(s)	54, 324
BseRI	GAGGAG	2 cut(s)	269, 521
BsgI	GTGCAG	1 cut(s)	380
BshFI	GGCC	3 cut(s)	39, 425, 488
BsiHKAI	GWGCWC	1 cut(s)	49
BsiSI	CCGG	2 cut(s)	59, 307
BslI	CCNNNNNNNGG	2 cut(s)	495, 568
BsmAI	GTCTC	1 cut(s)	503
BsnI	GGCC	3 cut(s)	39, 425, 488
Bsp1286I	GDGCHC	1 cut(s)	49
Bsp143I	GATC	8 cut(s)	33, 156, 214, 244, 403, 466, 529, 538
BspANI	GGCC	3 cut(s)	39, 425, 488
BspLI	GGNNCC	1 cut(s)	448
BspMAI	CTGCAG	1 cut(s)	494
BspPI	GGATC	4 cut(s)	41, 411, 474, 537
BspTI	CTTAAG	2 cut(s)	419, 482
BsrFI	RCCGGY	1 cut(s)	306
BsrI	ACTGG	2 cut(s)	54, 324
BssAI	RCCGGY	1 cut(s)	306
BssECI	CCNNGG	3 cut(s)	40, 59, 450
BssMI	GATC	8 cut(s)	33, 156, 214, 244, 403, 466, 529, 538
BssNI	GRCGYC	2 cut(s)	290, 600
BssT1I	CCWWGG	2 cut(s)	40, 450
Bst2UI	CCWGG	1 cut(s)	112
Bst4CI	ACNGT	3 cut(s)	16, 85, 342
Bst6I	CTCTTC	1 cut(s)	300
BstACI	GRCGYC	2 cut(s)	290, 600
BstAFI	CTTAAG	2 cut(s)	419, 482
BstC8I	GCNNGC	3 cut(s)	312, 427, 490
BstENI	CCTNNNNNAGG	1 cut(s)	493
BstF5I	GGATG	2 cut(s)	379, 505
BstHHI	GCGC	1 cut(s)	117
BstKTI	GATC	8 cut(s)	36, 159, 217, 247, 406, 469, 532, 541
BstMAI	GTCTC	1 cut(s)	503
BstMBI	GATC	8 cut(s)	33, 156, 214, 244, 403, 466, 529, 538
BstNI	CCWGG	1 cut(s)	112
BstSCI	CCNGG	2 cut(s)	58, 110
BstSFI	CTRYAG	1 cut(s)	490
BstV2I	GAAGAC	2 cut(s)	177, 343
BstX2I	RGATCY	2 cut(s)	214, 244
BstYI	RGATCY	2 cut(s)	214, 244
BsuI	GTATCC	1 cut(s)	565
BsuRI	GGCC	3 cut(s)	39, 425, 488
BtsCI	GGATG	2 cut(s)	379, 505
BtsIMutI	CAGTG	1 cut(s)	47
Cac8I	GCNNGC	3 cut(s)	312, 427, 490
CfoI	GCGC	1 cut(s)	117
Cfr10I	RCCGGY	1 cut(s)	306
Cfr13I	GGNCC	1 cut(s)	56
CseI	GACGC	2 cut(s)	298, 608
Csp6I	GTAC	2 cut(s)	350, 635
CviAII	CATG	3 cut(s)	133, 276, 563
CviJI	RGCY	8 cut(s)	39, 282, 310, 425, 488, 561, 607, 650
CviKI_1	RGCY	8 cut(s)	39, 282, 310, 425, 488, 561, 607, 650
CviQI	GTAC	2 cut(s)	350, 635
DpnI	GATC	8 cut(s)	35, 158, 216, 246, 405, 468, 531, 540
DpnII	GATC	8 cut(s)	33, 156, 214, 244, 403, 466, 529, 538
Eam1104I	CTCTTC	1 cut(s)	300
EarI	CTCTTC	1 cut(s)	300
Eco130I	CCWWGG	2 cut(s)	40, 450
Eco147I	AGGCCT	2 cut(s)	425, 488
Eco47I	GGWCC	1 cut(s)	56
Eco57I	CTGAAG	1 cut(s)	374
EcoNI	CCTNNNNNAGG	1 cut(s)	493
EcoRII	CCWGG	1 cut(s)	110
EcoT14I	CCWWGG	2 cut(s)	40, 450
ErhI	CCWWGG	2 cut(s)	40, 450
FaeI	CATG	3 cut(s)	136, 279, 566
FaiI	YATR	3 cut(s)	134, 277, 564
FatI	CATG	3 cut(s)	132, 275, 562
FbaI	TGATCA	2 cut(s)	156, 538
FokI	GGATG	2 cut(s)	386, 512
GlaI	GCGC	1 cut(s)	116
HaeIII	GGCC	3 cut(s)	39, 425, 488
HapII	CCGG	2 cut(s)	59, 307
HgaI	GACGC	2 cut(s)	298, 608
HhaI	GCGC	1 cut(s)	117
Hin1I	GRCGYC	2 cut(s)	290, 600
Hin1II	CATG	3 cut(s)	136, 279, 566
Hin6I	GCGC	1 cut(s)	115
HinP1I	GCGC	1 cut(s)	115
HindIII	AAGCTT	1 cut(s)	648
HinfI	GANTC	1 cut(s)	128
HpaII	CCGG	2 cut(s)	59, 307
HphI	GGTGA	2 cut(s)	251, 653
Hpy188I	TCNGA	3 cut(s)	197, 471, 538
HpyAV	CCTTC	5 cut(s)	85, 259, 349, 457, 489
HpyCH4III	ACNGT	3 cut(s)	16, 85, 342
HpyCH4IV	ACGT	1 cut(s)	185
HpyCH4V	TGCA	4 cut(s)	361, 429, 492, 555
HpySE526I	ACGT	1 cut(s)	185
Hsp92I	GRCGYC	2 cut(s)	290, 600
Hsp92II	CATG	3 cut(s)	136, 279, 566
HspAI	GCGC	1 cut(s)	115
Ksp22I	TGATCA	2 cut(s)	156, 538
Kzo9I	GATC	8 cut(s)	33, 156, 214, 244, 403, 466, 529, 538
LmnI	GCTCC	2 cut(s)	44, 279
MaeII	ACGT	1 cut(s)	185
MaeIII	GTNAC	1 cut(s)	641
MalI	GATC	8 cut(s)	35, 158, 216, 246, 405, 468, 531, 540
MboI	GATC	8 cut(s)	33, 156, 214, 244, 403, 466, 529, 538
MboII	GAAGA	6 cut(s)	182, 224, 254, 287, 348, 604
MflI	RGATCY	2 cut(s)	214, 244
MhlI	GDGCHC	1 cut(s)	49
MluCI	AATT	4 cut(s)	20, 67, 139, 614
MlyI	GAGTC	1 cut(s)	122
MmeI	TCCRAC	1 cut(s)	35
MnlI	CCTC	9 cut(s)	23, 134, 229, 247, 303, 340, 436, 499, 562
MroXI	GAANNNNTTC	1 cut(s)	95
MseI	TTAA	5 cut(s)	6, 260, 420, 483, 652
MspCI	CTTAAG	2 cut(s)	419, 482
MspI	CCGG	2 cut(s)	59, 307
MspR9I	CCNGG	2 cut(s)	60, 112
MvaI	CCWGG	1 cut(s)	112
NciI	CCSGG	1 cut(s)	60
NdeII	GATC	8 cut(s)	33, 156, 214, 244, 403, 466, 529, 538
NlaIII	CATG	3 cut(s)	136, 279, 566
NlaIV	GGNNCC	1 cut(s)	448
NmuCI	GTSAC	1 cut(s)	641
PceI	AGGCCT	2 cut(s)	425, 488
PcsI	WCGNNNNNNNCGW	2 cut(s)	201, 606
PdmI	GAANNNNTTC	1 cut(s)	95
PleI	GAGTC	1 cut(s)	122
PpsI	GAGTC	1 cut(s)	122
Psp6I	CCWGG	1 cut(s)	110
PspGI	CCWGG	1 cut(s)	110
PspN4I	GGNNCC	1 cut(s)	448
PspPI	GGNCC	1 cut(s)	56
PstI	CTGCAG	1 cut(s)	494
PsuI	RGATCY	2 cut(s)	214, 244
RsaI	GTAC	2 cut(s)	351, 636
RsaNI	GTAC	2 cut(s)	350, 635
SaqAI	TTAA	5 cut(s)	6, 260, 420, 483, 652
Sau3AI	GATC	8 cut(s)	33, 156, 214, 244, 403, 466, 529, 538
Sau96I	GGNCC	1 cut(s)	56
SchI	GAGTC	1 cut(s)	122
ScrFI	CCNGG	2 cut(s)	60, 112
SduI	GDGCHC	1 cut(s)	49
SfcI	CTRYAG	1 cut(s)	490
SinI	GGWCC	1 cut(s)	56
SmlI	CTYRAG	3 cut(s)	218, 419, 482
SmoI	CTYRAG	3 cut(s)	218, 419, 482
Sse9I	AATT	4 cut(s)	20, 67, 139, 614
SseBI	AGGCCT	2 cut(s)	425, 488
StuI	AGGCCT	2 cut(s)	425, 488
StyD4I	CCNGG	2 cut(s)	58, 110
StyI	CCWWGG	2 cut(s)	40, 450
TaaI	ACNGT	3 cut(s)	16, 85, 342
TaiI	ACGT	1 cut(s)	188
TaqI	TCGA	4 cut(s)	126, 504, 567, 609
TasI	AATT	4 cut(s)	20, 67, 139, 614
Tru1I	TTAA	5 cut(s)	6, 260, 420, 483, 652
Tru9I	TTAA	5 cut(s)	6, 260, 420, 483, 652
TscAI	CASTG	1 cut(s)	54
TseFI	GTSAC	1 cut(s)	641
Tsp45I	GTSAC	1 cut(s)	641
TspDTI	ATGAA	1 cut(s)	264
TspGWI	ACGGA	1 cut(s)	637
TspRI	CASTG	1 cut(s)	54
Vha464I	CTTAAG	2 cut(s)	419, 482
VpaK11BI	GGWCC	1 cut(s)	56
XagI	CCTNNNNNAGG	1 cut(s)	493
XapI	RAATTY	3 cut(s)	20, 139, 614
XmnI	GAANNNNTTC	1 cut(s)	95

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.